prot_M-pyrifera_M_contig8937.20712.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8937.20712.1
Unique Nameprot_M-pyrifera_M_contig8937.20712.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length56
Homology
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BLAST of mRNA_M-pyrifera_M_contig8937.20712.1 vs. uniprot
Match: D8LMY9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMY9_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 2.540e-20
Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 0 
Query:    1 FQVRQSLRAKFNMGTAPLQDCCSMYWCQFCFIMQTAKEVALKKGDDPVYLGEVSMN 56
            +QVRQSLRAK++MG APL D  S+Y+C  CFIMQ AKEVAL+KGD+PVY GEV MN
Sbjct:   78 YQVRQSLRAKYDMGFAPLPDFVSLYFCGCCFIMQNAKEVALQKGDEPVYFGEVGMN 133
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BLAST of mRNA_M-pyrifera_M_contig8937.20712.1 vs. uniprot
Match: A0A6U1MVS5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MVS5_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 5.270e-7
Identity = 22/54 (40.74%), Postives = 34/54 (62.96%), Query Frame = 0 
Query:    3 VRQSLRAKFNMGTAPLQDCCSMYWCQFCFIMQTAKEVALKKGDDPVYLGEVSMN 56
             RQ++R K+++G   + D  + Y+C  C + Q A+EVA KKG +PV+ G V  N
Sbjct:   67 TRQTIRTKYSLGYNEIMDFVAAYFCGCCVVNQMAREVAKKKGKEPVWFGSVKTN 120
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8937.20712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMY9_ECTSI2.540e-2071.43Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6U1MVS5_9STRA5.270e-740.74Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8937contigM-pyrifera_M_contig8937:111..278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8937.20712.1mRNA_M-pyrifera_M_contig8937.20712.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8937 111..278 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8937.20712.1 ID=prot_M-pyrifera_M_contig8937.20712.1|Name=mRNA_M-pyrifera_M_contig8937.20712.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=56bp
FQVRQSLRAKFNMGTAPLQDCCSMYWCQFCFIMQTAKEVALKKGDDPVYL
GEVSMN
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