prot_M-pyrifera_M_contig88714.20599.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88714.20599.1
Unique Nameprot_M-pyrifera_M_contig88714.20599.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length143
Homology
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A5A8C9E4_CAFRO (S5 DRBM domain-containing protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8C9E4_CAFRO)

HSP 1 Score: 167 bits (422), Expect = 3.790e-46
Identity = 78/143 (54.55%), Postives = 105/143 (73.43%), Query Frame = 0
Query:    1 MEETAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQLYHDLVGKKNRVKVIVESRPPAYDTPRMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHVSDDR 143
            ME T KA+ +VGN  GGIG+G+ RH QADRA ELA++AA+RDMI +S Y+GQLYHDLVGKKN +KV++ SR P ++ P    +I T +EL G+RH  A ++GPKRR  +T+ QALF AF  + PY+ SA  RG R++++  DR
Sbjct:  415 METTEKAMAIVGNGCGGIGFGMARHAQADRATELAVAAAQRDMIHVSLYKGQLYHDLVGKKNNIKVLIWSRAPGHEKPSGDHMITTIMELMGVRHYSAKIIGPKRRNPFTVAQALFNAFDNHLPYEVSAANRGLRLLNLGADR 557          
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A482REY0_9ARCH (S5 DRBM domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482REY0_9ARCH)

HSP 1 Score: 120 bits (302), Expect = 2.530e-31
Identity = 59/143 (41.26%), Postives = 90/143 (62.94%), Query Frame = 0
Query:    1 MEETAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQLYHDLVGKKNRVKVIVESRPPAYDTPRMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHVSDDR 143
            M  + +  ++VGN  GG G+G+G+HK+   A + A++ A+RDMI +S ++ QLYHDL+GKKN + VIV + P +        +I+   E+ GI HA A +VG +RR  Y +VQALF++F  + P +  A MRG R+  +  DR
Sbjct:   61 MIASTRCCIVVGNGMGGGGFGIGKHKEPFMATKQALANAQRDMIHVSLHKKQLYHDLIGKKNNLYVIVRTMPASTVAQNCSPLIQDIFEMMGIEHASAKIVGSRRRNPYNVVQALFDSFNHHMPPEHEAYMRGLRMQWMGADR 203          
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A7S1U8N8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8N8_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.780e-15
Identity = 48/135 (35.56%), Postives = 76/135 (56.30%), Query Frame = 0
Query:    6 KALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQ-LYHDLVGKKNRVKVIVESRPPAYDTPRMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHV 139
            +AL +VGN  G +G+GVG+ +    A E +   A++++I +  Y G+ LYHDL GK N  +V + +RP   +  R   I    +E AGI  A   + GP     Y++V+A F A  +++     AR+RGRRI+ +
Sbjct:   77 RALTVVGNINGAVGFGVGKAEDIQDATEKSFRNAKKNIIIVDRYFGRALYHDLYGKHNGCRVWIYARPVNTEL-RAGRITAAIMEAAGIMDATVRIDGPMN--PYSVVRATFNALSKHRSIVHHARVRGRRILSL 208          
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A7S3UU99_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU99_HETAK)

HSP 1 Score: 77.8 bits (190), Expect = 4.780e-15
Identity = 48/141 (34.04%), Postives = 79/141 (56.03%), Query Frame = 0
Query:    4 TAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYR-GQLYHDLVGKKNRVKVIVESRPPAYDTPRMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHVSDDR 143
            T +A+V++GN +G +GYG+G+  +   AV+ AI AA R++I++  +  G L  D  GK N   V + +  P         +I T L+ AG+  A    VG  RR  + +++A F A ++++  +A AR RG+RIV +   R
Sbjct:   51 TNRAVVVIGNLKGAVGYGMGKAAENRDAVDRAIRAASRNLIYVDRFLDGGLAQDCAGKHNTCLVKLRAVRPGAGLSAGP-LIRTVLQSAGVADASGKAVG--RRNVFAVLRATFRALERHEGVEAIARKRGKRIVSMEKAR 188          
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A1Y2FSQ1_PROLT (Ribosomal protein S5, C-terminal domain-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FSQ1_PROLT)

HSP 1 Score: 70.9 bits (172), Expect = 7.610e-13
Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 0
Query:    8 LVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQ-LYHDLVGKKNRVKVIVESRPPAYDTPRMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHV 139
            L +VGN +G IG+G G+H +   A   A++ A ++M F+  Y+ + +Y D+  K + V++ + SRP  +     H+I E     AGI    A V G   RT   +V+ +FEA K+ +     A+ RGRRIV V
Sbjct:    4 LAVVGNGKGMIGFGEGKHAEQGTATRKAVTQAVKNMEFVHRYQDRTIYGDVDYKFHAVQLRLRSRPAGFGIRANHFIYEIC-RCAGITDLSAKVWGS--RTGMNVVKGVFEALKEQRLPSTIAQARGRRIVDV 133          
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A2D5YPT1_9PROT (30S ribosomal protein S5 n=2 Tax=Bacteriovoracales TaxID=2024979 RepID=A0A2D5YPT1_9PROT)

HSP 1 Score: 68.9 bits (167), Expect = 1.260e-11
Identity = 41/131 (31.30%), Postives = 75/131 (57.25%), Query Frame = 0
Query:    7 ALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQLYHDLVGKKNRVKVIVESRPPAYDTP-RMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRI 136
            AL++VG+++G +GYG+G+ K+   A+  A  AA++ MI +    G + H+++G+ +  K++   +P A  T  +      + LELAGI+  +      +    + IV+A F+A KQ +  D  AR+RG+ +
Sbjct:   65 ALMIVGDKKGKVGYGLGKAKEVPEAIRKATQAAQKSMISVPVDGGTIPHEVLGEFDAGKILF--KPAAEGTGVKAAGACRSILELAGIKDVLTK--SQRGNNPHNIVKATFDALKQLRSADEVARVRGKDV 191          
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A2M7U375_9BACT (30S ribosomal protein S5 n=2 Tax=Candidatus Roizmanbacteria TaxID=1752723 RepID=A0A2M7U375_9BACT)

HSP 1 Score: 68.6 bits (166), Expect = 2.980e-11
Identity = 39/136 (28.68%), Postives = 74/136 (54.41%), Query Frame = 0
Query:    4 TAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQLYHDLVGKKNRVKVIVESRPPAYDTPRMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHV 139
            T  ALV+VG+R+G +G G+GR ++   A++  I+ A+R+MI    Y   L H++  K    ++I++  PP     ++  ++   L++AG+ +A   ++G + + T     A+ EA KQ +P      ++  + V V
Sbjct:   35 TFSALVVVGDRKGKVGIGLGRGREVPPAIQKGITQAKRNMIQFPLYNETLPHEIKIKYKSSRLILKPAPPGTGL-KVGGVVRAVLDVAGVNNASGKIIGTRNQITNAY--AIMEAIKQLKPRIVKETVKKEKKVEV 167          
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A1F3SJJ1_9PROT (30S ribosomal protein S5 n=1 Tax=Bdellovibrionales bacterium GWA2_49_15 TaxID=1797384 RepID=A0A1F3SJJ1_9PROT)

HSP 1 Score: 67.0 bits (162), Expect = 4.110e-11
Identity = 39/134 (29.10%), Postives = 75/134 (55.97%), Query Frame = 0
Query:    7 ALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQLYHDLVGKKNRVKVIVESRPPAYDTP-RMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHV 139
            AL++VG+++G +G+G+G+  +   A+  AI AA R+MI +S  +G + H ++G  +  ++I   +P A  T  +      + LELAG+++ +   V  +    + +V+A F+A +  +  +  A MRG  I  +
Sbjct:   38 ALMIVGDKKGSVGFGLGKANEVPEAIRKAIQAAHRNMIKVSLDKGTIPHQIIGTHDAGRIIF--KPAAEGTGIKAAGACRSILELAGVKNVLTKSV--RNNNPHNVVKATFDALRALRSAEQIAAMRGIDIKRI 167          
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A1F7J4I6_9BACT (30S ribosomal protein S5 n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_40_42 TaxID=1802066 RepID=A0A1F7J4I6_9BACT)

HSP 1 Score: 65.9 bits (159), Expect = 7.790e-11
Identity = 34/114 (29.82%), Postives = 66/114 (57.89%), Query Frame = 0
Query:    4 TAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQLYHDLVGKKNRVKVIVESRPPAYDTPRMHWIIETALELAGIRHAMATVVGPKRR--TTYTIVQAL 115
            T  ALV+VG+R+G +G G+GR ++   A++ AIS A++ M  I  ++  + H +  K    K++++  P      ++  ++   LELAG+ +A   ++G + +   TY +++AL
Sbjct:   31 TFSALVVVGDRKGSVGIGIGRSQEVPPAIKKAISYAKKHMFLIPLHKSTIPHQVKLKYKAAKILLKPAPEGTGL-KVGSVVRALLELAGVENASGKIIGSRNQIVNTYAVLRAL 143          
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: R7GKK4_9CLOT (30S ribosomal protein S5 n=3 Tax=Terrabacteria group TaxID=1783272 RepID=R7GKK4_9CLOT)

HSP 1 Score: 66.2 bits (160), Expect = 8.090e-11
Identity = 41/134 (30.60%), Postives = 72/134 (53.73%), Query Frame = 0
Query:    7 ALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQLYHDLVGKKNRVKVIVESRPPAYDTPRMHW-IIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHV 139
            ALV++G+R+G +G+G G+  +   A++ AI  A+++MI++ T    + H + G     KV++  RP A  T  +    +   LELAGI   ++  +G   RT   +V+A FE  K+    +  A  RG+ +  +
Sbjct:   39 ALVVIGDRKGNVGFGSGKSNEVPDAIKKAIENAKKNMIYVPTVNTTIPHTVTGTFGAGKVLL--RPAAAGTGVIAGGPVRAVLELAGISDILSKALGS--RTPINMVRATFEGLKELSTVEQIAARRGKTVEEI 168          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8C9E4_CAFRO3.790e-4654.55S5 DRBM domain-containing protein n=3 Tax=Sar TaxI... [more]
A0A482REY0_9ARCH2.530e-3141.26S5 DRBM domain-containing protein n=1 Tax=archaeon... [more]
A0A7S1U8N8_9STRA2.780e-1535.56Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3UU99_HETAK4.780e-1534.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Y2FSQ1_PROLT7.610e-1335.34Ribosomal protein S5, C-terminal domain-domain-con... [more]
A0A2D5YPT1_9PROT1.260e-1131.3030S ribosomal protein S5 n=2 Tax=Bacteriovoracales... [more]
A0A2M7U375_9BACT2.980e-1128.6830S ribosomal protein S5 n=2 Tax=Candidatus Roizma... [more]
A0A1F3SJJ1_9PROT4.110e-1129.1030S ribosomal protein S5 n=1 Tax=Bdellovibrionales... [more]
A0A1F7J4I6_9BACT7.790e-1129.8230S ribosomal protein S5 n=1 Tax=Candidatus Roizma... [more]
R7GKK4_9CLOT8.090e-1130.6030S ribosomal protein S5 n=3 Tax=Terrabacteria gro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005324Ribosomal protein S5, C-terminalPFAMPF03719Ribosomal_S5_Ccoord: 59..132
e-value: 3.8E-7
score: 29.5
NoneNo IPR availableGENE3D3.30.160.20coord: 4..44
e-value: 7.0E-8
score: 34.2
NoneNo IPR availablePANTHERPTHR13718:SF9128S RIBOSOMAL PROTEIN S5, MITOCHONDRIALcoord: 4..141
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 6..49
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 47..141
e-value: 2.3E-8
score: 35.5
IPR013810Ribosomal protein S5, N-terminalPFAMPF00333Ribosomal_S5coord: 5..46
e-value: 1.1E-8
score: 34.9
IPR013810Ribosomal protein S5, N-terminalPROSITEPS50881S5_DSRBDcoord: 1..46
score: 12.147
IPR000851Ribosomal protein S5PANTHERPTHR13718RIBOSOMAL S SUBUNITcoord: 4..141
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 53..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88714contigM-pyrifera_M_contig88714:270..698 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88714.20599.1mRNA_M-pyrifera_M_contig88714.20599.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88714 270..716 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88714.20599.1 ID=prot_M-pyrifera_M_contig88714.20599.1|Name=mRNA_M-pyrifera_M_contig88714.20599.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp
MEETAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYR
GQLYHDLVGKKNRVKVIVESRPPAYDTPRMHWIIETALELAGIRHAMATV
VGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHVSDDR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005324Ribosomal_S5_C
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR013810Ribosomal_S5_N
IPR000851Ribosomal_S5
IPR020568Ribosomal_S5_D2-typ_fold