prot_M-pyrifera_M_contig88635.20579.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88635.20579.1
Unique Nameprot_M-pyrifera_M_contig88635.20579.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length165
Homology
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: A0A5A8DTK3_CAFRO (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DTK3_CAFRO)

HSP 1 Score: 246 bits (629), Expect = 2.610e-80
Identity = 112/164 (68.29%), Postives = 140/164 (85.37%), Query Frame = 0
Query:    1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 164
            RA TYF+LGGAK +YAS  R AI+ A+ TM+ASADVLALAS+EVD+ +IP  +TVTVKWRGKPVFIR+R+ +Q+ E +  TPAGLRDP  DAERT+ P WL+++GICTHLGCVPM++ GDY GW+CPCH SHYDGSGRIR+GPAPLNLE+PPYKF+ ++ ++LG
Sbjct:   80 RAFTYFVLGGAKFVYASTVRFAIVNALATMSASADVLALASVEVDLGAIPLSETVTVKWRGKPVFIRNRTEEQIAECAD-TPAGLRDPQTDAERTENPKWLVILGICTHLGCVPMSNAGDYNGWYCPCHGSHYDGSGRIRRGPAPLNLEIPPYKFVGEDKLILG 242          
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: A0A812MJ19_9DINO (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812MJ19_9DINO)

HSP 1 Score: 238 bits (607), Expect = 3.200e-77
Identity = 108/164 (65.85%), Postives = 137/164 (83.54%), Query Frame = 0
Query:    1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 164
            RA TYF+LGGA+ LYASA R+A++R + T++ASADVLALA+LEVD+ ++  G+ +TVKWRGKPVF++HR+  Q+ EV+     GLRDP  DAERTQ P WL+V+GICTHLGCVP+A+ G++ GWFCPCH SHYDGSGRIRQGPAPLNLEVPPYKF+  + ++LG
Sbjct:   62 RAFTYFVLGGARFLYASAVRVAVVRTLATLSASADVLALANLEVDLKAVQPGECITVKWRGKPVFVKHRTEDQIAEVAAPL-QGLRDPQTDAERTQDPKWLVVLGICTHLGCVPIANAGNFKGWFCPCHGSHYDGSGRIRQGPAPLNLEVPPYKFVGGDKLILG 224          
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: W2M1B7_PHYPR (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=10 Tax=Peronosporaceae TaxID=4777 RepID=W2M1B7_PHYPR)

HSP 1 Score: 237 bits (605), Expect = 4.800e-77
Identity = 107/164 (65.24%), Postives = 137/164 (83.54%), Query Frame = 0
Query:    1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 164
            RA TYF+LGGA+  YA+AAR+A+++ V +M+ASADVLALA+ E D+SSI  G TVTVKWRGKP+FI+HR+ K+++  +    + LRDP  DA R QKP+WL+V+G+CTHLGCVP +D G+YGGWFCPCH SHYD SGRIR+GPAPLNLE+PPYKFI+D+ +LLG
Sbjct:   52 RAFTYFMLGGARVAYATAARLAVVKFVGSMSASADVLALATAEFDLSSINEGSTVTVKWRGKPIFIKHRTAKEIDISNQVDVSNLRDPETDAVRVQKPEWLVVLGVCTHLGCVPTSDAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYKFIEDDKILLG 215          
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: M4B2Y1_HYAAE (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2Y1_HYAAE)

HSP 1 Score: 234 bits (598), Expect = 5.940e-76
Identity = 106/164 (64.63%), Postives = 136/164 (82.93%), Query Frame = 0
Query:    1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 164
            RA TYF+LGGA+  YA+AAR+A+++ V +M+ASADVLAL++ E D+S+I  G TVTVKWRGKP+FI+HR+ K+++       + LRDP  DA R QKP+WL+V+G+CTHLGCVP ++ G+YGGWFCPCH SHYD SGRIR+GPAPLNLE+PPYKFI+DN VLLG
Sbjct:   54 RAFTYFMLGGARVAYATAARLAVVKFVGSMSASADVLALSTAEFDLSNISEGSTVTVKWRGKPIFIKHRTAKEIDISEQVDVSHLRDPETDAVRVQKPEWLVVLGVCTHLGCVPTSNAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYKFIEDNKVLLG 217          
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: H3GII1_PHYRM (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=13 Tax=Peronosporaceae TaxID=4777 RepID=H3GII1_PHYRM)

HSP 1 Score: 234 bits (596), Expect = 1.160e-75
Identity = 104/164 (63.41%), Postives = 136/164 (82.93%), Query Frame = 0
Query:    1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 164
            RA TYF+LGGA+  YA+AAR+A+++ V +M+ASADVLALA+ E D+S+I  G TVTVKWRGKP+FI+HR+ K+++  +      LRDP  DA R QKP+WL+V+G+CTHLGCVP +D G+YGGWFCPCH SHYD SGRIR+GPAPLNLE+PPY+F+++N +LLG
Sbjct:   53 RAFTYFMLGGARVAYATAARLAVVKFVGSMSASADVLALATAEFDLSNINEGSTVTVKWRGKPIFIKHRTAKEIDISNQVDVGNLRDPETDAVRVQKPEWLVVLGVCTHLGCVPTSDAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYEFLEENKILLG 216          
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: A0A2D4CB52_PYTIN (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CB52_PYTIN)

HSP 1 Score: 233 bits (594), Expect = 2.660e-75
Identity = 106/164 (64.63%), Postives = 135/164 (82.32%), Query Frame = 0
Query:    1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 164
            RA TYF+LGGA+  YA+AAR+A+I+ V +M+ASADVLALA+ E D+S+I  G TVTVKWRGKP+FI+HRS K++   +    + LRDP  DAER + P WL+V+G+CTHLGCVP ++ G+YGGWFCPCH SHYD SGRIR+GPAPLNLE+PPY+FI+DN +LLG
Sbjct:   57 RAFTYFMLGGARVAYATAARLAVIKFVGSMSASADVLALATAEFDLSNIDEGATVTVKWRGKPIFIKHRSEKEIALSNDVNLSNLRDPETDAERVKDPKWLVVLGVCTHLGCVPTSNAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYQFIEDNKILLG 220          
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: A0A5D6XVF7_9STRA (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVF7_9STRA)

HSP 1 Score: 232 bits (591), Expect = 6.880e-75
Identity = 105/164 (64.02%), Postives = 134/164 (81.71%), Query Frame = 0
Query:    1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 164
            RA TYFLLGGA+  YA+A R+A+I+ V +M+ASADVLALA+ E D+S+I  G TVTVKWRGKP+FI+HR+ K++E  +    + LRDP  DA R Q P WL+V+G+CTHLGCVP ++ G+YGGWFCPCH SHYD SGRIR+GPAPLNLE+PPYKF+++N +LLG
Sbjct:   54 RAFTYFLLGGARVAYATAGRLAVIKFVGSMSASADVLALATAEFDLSNIDEGATVTVKWRGKPIFIKHRTDKEIELSNAVNVSNLRDPETDAVRVQDPKWLVVLGVCTHLGCVPTSNAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYKFLENNKILLG 217          
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: A0A7S3K5M4_9STRA (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K5M4_9STRA)

HSP 1 Score: 230 bits (586), Expect = 4.090e-74
Identity = 106/164 (64.63%), Postives = 131/164 (79.88%), Query Frame = 0
Query:    1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 164
            R  TY ++G  K +YASA RIA I+ + +M AS DVLALAS E DVS++ AG+T+TVKWRGKPVFIRHR+ ++V E  G +   LRDP  DA+R Q+ DWL+VMGICTHLGCVP+A+ G+Y GWFCPCH SHYD SGRIR+GPAPLNLEVPPYKF+D + +L+G
Sbjct:   55 RGFTYLVMGANKFIYASAVRIAAIKFIASMAASKDVLALASAEFDVSAVEAGKTITVKWRGKPVFIRHRTSEEVAEAEGVSLDALRDPQSDADRVQEKDWLVVMGICTHLGCVPIANAGEYNGWFCPCHGSHYDVSGRIRKGPAPLNLEVPPYKFLDSDKLLVG 218          
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: F0W758_9STRA (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=2 Tax=Albugo TaxID=65356 RepID=F0W758_9STRA)

HSP 1 Score: 229 bits (585), Expect = 6.200e-74
Identity = 103/164 (62.80%), Postives = 135/164 (82.32%), Query Frame = 0
Query:    1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 164
            RA TYF+LGGA+ +YA+AAR+A+I+ V +M+ASADVLALA+ E D+SSI  G TVTVKWRGKP+FI+HR+ +++E  +    + LRDP  D  R + P WL+V+G+CTHLGCVP+++ GDY GWFCPCH SHYD SGRIR+GPAPLNLE+PPY+F++DN +LLG
Sbjct:   57 RAFTYFVLGGARIMYATAARLAVIKFVGSMSASADVLALATAEFDLSSIDEGATVTVKWRGKPIFIKHRTDQEIESANDVPVSSLRDPETDDVRVKDPKWLVVLGVCTHLGCVPISNAGDYKGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYQFLEDNKILLG 220          
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: K3WIU0_GLOUD (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIU0_GLOUD)

HSP 1 Score: 229 bits (583), Expect = 1.130e-73
Identity = 106/164 (64.63%), Postives = 132/164 (80.49%), Query Frame = 0
Query:    1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 164
            RA TYFLLGGA+  YA+A R+A+I+ V +M+ASADVLALA+ E D+S+I  G TVTVKWRGKP+FI+HR+ K++   +    A L+DP  D  R Q P WLIV+G+CTHLGCVP ++ G+YGGWFCPCH SHYD SGRIR+GPAPLNLE+PPYKFI++N VLLG
Sbjct:   54 RAFTYFLLGGARVAYATAGRLAVIKFVGSMSASADVLALATAEFDLSNIDEGATVTVKWRGKPIFIKHRTDKEITISNEVNVANLKDPETDDVRVQNPKWLIVLGVCTHLGCVPTSNAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYKFIEENKVLLG 217          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DTK3_CAFRO2.610e-8068.29Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
A0A812MJ19_9DINO3.200e-7765.85Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
W2M1B7_PHYPR4.800e-7765.24Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
M4B2Y1_HYAAE5.940e-7664.63Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
H3GII1_PHYRM1.160e-7563.41Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
A0A2D4CB52_PYTIN2.660e-7564.63Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
A0A5D6XVF7_9STRA6.880e-7564.02Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
A0A7S3K5M4_9STRA4.090e-7464.63Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
F0W758_9STRA6.200e-7462.80Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
K3WIU0_GLOUD1.130e-7364.63Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005805Rieske iron-sulphur protein, C-terminalPRINTSPR00162RIESKEcoord: 136..148
score: 70.19
coord: 102..113
score: 62.29
coord: 124..136
score: 63.65
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 46..151
e-value: 4.4E-11
score: 42.6
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 69..162
score: 17.827
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitTIGRFAMTIGR01416TIGR01416coord: 6..164
e-value: 1.2E-54
score: 183.0
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 34..163
e-value: 4.1E-53
score: 180.9
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 27..162
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainPFAMPF02921UCR_TMcoord: 1..35
e-value: 7.3E-5
score: 23.2
IPR014349Rieske iron-sulphur proteinPANTHERPTHR10134CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 1..164
NoneNo IPR availablePANTHERPTHR10134:SF1CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL-RELATEDcoord: 1..164
NoneNo IPR availableSUPERFAMILY81502ISP transmembrane anchorcoord: 2..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88635contigM-pyrifera_M_contig88635:2..496 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88635.20579.1mRNA_M-pyrifera_M_contig88635.20579.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88635 2..496 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88635.20579.1 ID=prot_M-pyrifera_M_contig88635.20579.1|Name=mRNA_M-pyrifera_M_contig88635.20579.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp
RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIP
AGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDW
LIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEV
PPYKFIDDNTVLLG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005805Rieske_Fe-S_prot_C
IPR017941Rieske_2Fe-2S
IPR006317Ubiquinol_cyt_c_Rdtase_Fe-S-su
IPR036922Rieske_2Fe-2S_sf
IPR004192Rieske_TM
IPR014349Rieske_Fe-S_prot