prot_M-pyrifera_M_contig88610.20569.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88610.20569.1
Unique Nameprot_M-pyrifera_M_contig88610.20569.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length89
Homology
BLAST of mRNA_M-pyrifera_M_contig88610.20569.1 vs. uniprot
Match: UPI0003719E47 (helix-turn-helix domain-containing protein n=1 Tax=Spirosoma panaciterrae TaxID=496058 RepID=UPI0003719E47)

HSP 1 Score: 53.1 bits (126), Expect = 3.880e-6
Identity = 31/92 (33.70%), Postives = 53/92 (57.61%), Query Frame = 0
Query:    1 MSDTIVNSIIALIIFQCFFCTLFLFTTERGKSVSNSILGIYLLILGSQFL-TIFIEQAGWFDLKNYYL---PFKFLYGPVIYFYTKSIILKD 88
            MS    + ++  +IFQ  F +LFL T +RGK +SN +LG +   LG   L T+ + +  +F+   + L       L+GP+++ +TKS+I +D
Sbjct:    1 MSFGFTDVLLCFLIFQLLFVSLFLVTLDRGKRISNGLLGSFFAALGLNLLDTLLLVKGVYFNYPAWGLWGTDLVLLFGPLLWLHTKSVIYRD 92          
BLAST of mRNA_M-pyrifera_M_contig88610.20569.1 vs. uniprot
Match: A0A317IEM9_9BACT (HTH araC/xylS-type domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A317IEM9_9BACT)

HSP 1 Score: 52.8 bits (125), Expect = 5.290e-6
Identity = 30/92 (32.61%), Postives = 53/92 (57.61%), Query Frame = 0
Query:    1 MSDTIVNSIIALIIFQCFFCTLFLFTTERGKSVSNSILGIYLLILGSQFLTIF--IEQAGWFD--LKNYYLPFKFLYGPVIYFYTKSIILKD 88
            M  ++   ++ ++IFQ     LFLFT ++GK +SN +LG + L +    L  F  IE+   ++  L  +      L+GP++Y YT+S+++KD
Sbjct:    1 MIFSLTQGLLIIVIFQLILIALFLFTHDKGKKISNILLGTFFLSIALNLLDSFLLIEKIYLYNTALVAWGSCLPLLFGPLLYLYTRSVLIKD 92          
BLAST of mRNA_M-pyrifera_M_contig88610.20569.1 vs. uniprot
Match: A0A832BRE5_9BACT (AraC family transcriptional regulator n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A832BRE5_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 7.290e-6
Identity = 31/92 (33.70%), Postives = 53/92 (57.61%), Query Frame = 0
Query:    1 MSDTIVNSIIALIIFQCFFCTLFLFTTERGKSVSNSILGIYLLILGSQFL-TIFIEQAGWFDLKNYYL---PFKFLYGPVIYFYTKSIILKD 88
            MS      +I L+IFQ  F + FLF+ ++GK VSN +LG++ L L    + +IF+ +  +    ++ L       LYGP+++ Y +S++ KD
Sbjct:    1 MSFNFTEVLILLVIFQLLFISFFLFSHQKGKRVSNRLLGVFFLSLCLNLVDSIFLLKRVYHAYPSWALWGSSMPLLYGPLMFLYVQSVVYKD 92          
BLAST of mRNA_M-pyrifera_M_contig88610.20569.1 vs. uniprot
Match: A0A7Y2MM99_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7Y2MM99_9BACT)

HSP 1 Score: 52.0 bits (123), Expect = 8.040e-6
Identity = 27/86 (31.40%), Postives = 48/86 (55.81%), Query Frame = 0
Query:    3 DTIVNSIIALIIFQCFFCTLFLFTTERGKSVSNSILGIYLLILGSQFLTIFIEQAGWFDLKNYYL----PFKFLYGPVIYFYTKSI 84
            +T+   +  L+IFQ  F ++FLFT+++G+ +SN +L  + L LG   L  F+  +G+FD    Y          + P++  YT+S+
Sbjct:    2 NTVFQVLTGLVIFQILFISIFLFTSKKGRRISNFLLAFFFLSLGCGMLDYFLLISGFFDENTQYAFILNSLVIFHAPLLLLYTQSL 87          
BLAST of mRNA_M-pyrifera_M_contig88610.20569.1 vs. uniprot
Match: A0A1P9X154_9BACT (HTH araC/xylS-type domain-containing protein n=1 Tax=Spirosoma montaniterrae TaxID=1178516 RepID=A0A1P9X154_9BACT)

HSP 1 Score: 50.8 bits (120), Expect = 2.520e-5
Identity = 32/92 (34.78%), Postives = 50/92 (54.35%), Query Frame = 0
Query:    1 MSDTIVNSIIALIIFQCFFCTLFLFTTERGKSVSNSILGIYLLILGSQFLTIFIEQAG-WFDLKNYYL---PFKFLYGPVIYFYTKSIILKD 88
            MS    + ++   IFQ  F +LFLF+ +RGK VSN +LG + L  G   L   +   G +F    + L       L+GP++Y +T+S+I +D
Sbjct:    1 MSFNFTDILLCFTIFQLLFVSLFLFSLDRGKRVSNGLLGGFFLSFGLNLLDALLLLKGVYFAYPAWGLWGTNMALLFGPLLYLHTQSVIYRD 92          
BLAST of mRNA_M-pyrifera_M_contig88610.20569.1 vs. uniprot
Match: A0A317HCD9_9BACT (HTH araC/xylS-type domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A317HCD9_9BACT)

HSP 1 Score: 50.4 bits (119), Expect = 3.450e-5
Identity = 29/95 (30.53%), Postives = 53/95 (55.79%), Query Frame = 0
Query:    1 MSDTIVNSIIALIIFQCFFCTLFLFTTERGKSVSNSILGIYLLILGSQFLTIFIEQAGWFDLKNYYLPFK----------FLYGPVIYFYTKSII 85
            M+ +  + +  L++FQ  F +LFLF+ ++G+ VSN++LG + L++    L  F+       LK  Y+PF            L+GP++Y Y +S++
Sbjct:    1 MNFSFSDILFVLVLFQLLFISLFLFSHQKGRRVSNALLGAFFLVVFLNLLDSFLL------LKRVYIPFPALAAWSSCFPLLFGPLLYLYAQSVL 89          
BLAST of mRNA_M-pyrifera_M_contig88610.20569.1 vs. uniprot
Match: UPI001A8FF1A7 (AraC family transcriptional regulator n=1 Tax=Muricauda sp. CAU 1633 TaxID=2816036 RepID=UPI001A8FF1A7)

HSP 1 Score: 50.1 bits (118), Expect = 4.660e-5
Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 0
Query:    1 MSDTIVNSIIALIIFQCFFCTLFLFTTERGKSVSNSILGIYLLILGSQFLTIFIEQAGWFDLKNYYLP---FKFLYGPVIYFYTKSII 85
            M+  I N +  LI+FQ     ++LFT +  K VSN IL  +L +L  QFL + +   G   L+  +     F FLYGP++Y Y+ S+I
Sbjct:    1 MNIGIQNIVPILIVFQSTLFAIYLFTYKGPKKVSNRILAFFLAVLALQFLAL-LNLMGQTRLEEVFAIRCIFGFLYGPLLYLYSNSLI 87          
BLAST of mRNA_M-pyrifera_M_contig88610.20569.1 vs. uniprot
Match: UPI000B0DCBE8 (helix-turn-helix domain-containing protein n=1 Tax=Sediminibacter sp. Hel_I_10 TaxID=1392490 RepID=UPI000B0DCBE8)

HSP 1 Score: 49.3 bits (116), Expect = 8.840e-5
Identity = 23/58 (39.66%), Postives = 37/58 (63.79%), Query Frame = 0
Query:   38 LGIYLLILGSQFLTIFIEQAGWFDLKNY-----YLPFK--FLYGPVIYFYTKSIILKD 88
            LG+++L+ G       +  AGW+ +KNY     + PF+  FL GP+I+FYT+S++ KD
Sbjct:   45 LGLFILLCGMYICPFMLGYAGWYSIKNYREFLFFTPFQQLFLIGPIIFFYTQSLLNKD 102          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88610.20569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
UPI0003719E473.880e-633.70helix-turn-helix domain-containing protein n=1 Tax... [more]
A0A317IEM9_9BACT5.290e-632.61HTH araC/xylS-type domain-containing protein n=1 T... [more]
A0A832BRE5_9BACT7.290e-633.70AraC family transcriptional regulator n=1 Tax=Chit... [more]
A0A7Y2MM99_9BACT8.040e-631.40Uncharacterized protein (Fragment) n=1 Tax=Saprosp... [more]
A0A1P9X154_9BACT2.520e-534.78HTH araC/xylS-type domain-containing protein n=1 T... [more]
A0A317HCD9_9BACT3.450e-530.53HTH araC/xylS-type domain-containing protein n=1 T... [more]
UPI001A8FF1A74.660e-537.50AraC family transcriptional regulator n=1 Tax=Muri... [more]
UPI000B0DCBE88.840e-539.66helix-turn-helix domain-containing protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..89
NoneNo IPR availableTMHMMTMhelixcoord: 64..86
NoneNo IPR availableTMHMMTMhelixcoord: 32..54
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88610contigM-pyrifera_M_contig88610:487..753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88610.20569.1mRNA_M-pyrifera_M_contig88610.20569.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88610 487..753 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88610.20569.1 ID=prot_M-pyrifera_M_contig88610.20569.1|Name=mRNA_M-pyrifera_M_contig88610.20569.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp
MSDTIVNSIIALIIFQCFFCTLFLFTTERGKSVSNSILGIYLLILGSQFL
TIFIEQAGWFDLKNYYLPFKFLYGPVIYFYTKSIILKDI
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