prot_M-pyrifera_M_contig8856.20559.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8856.20559.1
Unique Nameprot_M-pyrifera_M_contig8856.20559.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length240
Homology
BLAST of mRNA_M-pyrifera_M_contig8856.20559.1 vs. uniprot
Match: D8LRC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC9_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 5.050e-57
Identity = 117/240 (48.75%), Postives = 139/240 (57.92%), Query Frame = 0
Query:    1 MEYERALFRVYDKSMEGFQSPGVKSVCNLAQKLFLVTAAGLFATLFLLHRQFVNEPGCLGELLEEAARAEGVLIPASSSSGGNVRSDGRTIGSITANNTKGTVEVSDDGAIIDPGREEGTVIGDAAGEGEGDSRKEDEEDDGDNHPARIRMPSGAWMPYDVMIGVSIGGGHGSSGRQEVGEADGGGVGAAAAGLGGNSSEMAANGTSFSADYTFAFEPIVLLLPDKLQQSHDFRWVRATV 240
            MEYERALFRVYDKSMEGF S GV+S CNL QKL LV +AGLFA LFLLH QFVN+PGCL  LLEEAA  EGVLI               T+ S+TAN T G ++   +G I+    + G                         HP++I++PSG W+PYDVM   + G   G  G  E    D   V      +G N S  A N T F+ADYTFAFEPIVLLLPDK+Q+ H F+WV  T+
Sbjct:    1 MEYERALFRVYDKSMEGFHSRGVRSACNLLQKLVLVASAGLFAALFLLHHQFVNKPGCLAPLLEEAASREGVLILP-------------TVRSVTANTTLGEIDTDPEGVIVGGPNQAGXXXXXXXX-----XXXXXXXXXXXRHPSKIQLPSGNWVPYDVMDEAAAGSAEGGEGGGEASSNDTAVVDGXXGEIGVNVS--AVNDTGFTADYTFAFEPIVLLLPDKIQEGHGFKWVNFTM 220          
BLAST of mRNA_M-pyrifera_M_contig8856.20559.1 vs. uniprot
Match: A0A6H5JH19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH19_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.030e-41
Identity = 125/352 (35.51%), Postives = 147/352 (41.76%), Query Frame = 0
Query:    1 MEYERALFRVYDKSMEGFQSPGVKSVCNLAQKLFLVTAAGLFATLFLLHRQFVNEPGCLGELLEEAARAEGVLIPASSSSGGNVRSDGRTIGSITANNTKGTVEVSDDGAIIDPGREEG---------TVIGDAAGEGEGDSRKEDEEDDGDNHPARIRMPSGAWMPYDVMIGVSIGGG-------------------------------------------------------------------------------------------------------HGSSGRQEVGEADGGGVGAAAAGLGGNSSEMAANGTSFSADYTFAFEPIVLLLPDKLQQSHDFRWVRATV 240
            MEYERALFRVYDKSMEGF S  V+S CNL QKLFLV +AGLFA L LLH QFVN+PGCL  LLEEAA  EGVLI               T+ SITAN T G ++   +G I+    + G                                D HP++I++PSG WMPYDVM+GVSIG G                                                                                                        GS G  +    D   +GA    +G N S  A N T F+ADYTFAFEPIVLLLPDK+Q+ H F+WV  T+
Sbjct:    1 MEYERALFRVYDKSMEGFHSREVRSACNLLQKLFLVASAGLFAALVLLHHQFVNKPGCLAPLLEEAASREGVLILP-------------TVRSITANTTLGEIDTDPEGVIVGGPNQAGGXXXXXXXXXXXXGGXXXXXXXXXXXXXXXXXDRHPSKIQLPSGNWMPYDVMVGVSIGNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRTADAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGGGQDEAAVEGAEGSEGGGQASSNDTAVIGAGGGEIGMNVS--AVNDTEFTADYTFAFEPIVLLLPDKIQEGHGFKWVNFTM 337          
BLAST of mRNA_M-pyrifera_M_contig8856.20559.1 vs. uniprot
Match: A0A7S4DCY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCY7_HETAK)

HSP 1 Score: 55.8 bits (133), Expect = 1.980e-5
Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 0
Query:    1 MEYERALFRVYDKSMEGFQ--SPGVKS-----VCNLAQKLFLVTAAGLFATLFLLHRQFVNEPGCLGELLE 64
            ME+ERALFRVYD+S+E  Q  SP   +     +   +QK+ ++ A G+      LH  FV +PGCL + LE
Sbjct:    1 MEFERALFRVYDRSLESIQLDSPWFGNARPSVILKWSQKILMIVALGMIVLTATLHTTFVEQPGCLKQKLE 71          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8856.20559.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRC9_ECTSI5.050e-5748.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JH19_9PHAE1.030e-4135.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4DCY7_HETAK1.980e-542.25Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..240
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8856contigM-pyrifera_M_contig8856:1372..10806 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8856.20559.1mRNA_M-pyrifera_M_contig8856.20559.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8856 1372..10806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8856.20559.1 ID=prot_M-pyrifera_M_contig8856.20559.1|Name=mRNA_M-pyrifera_M_contig8856.20559.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=240bp
MEYERALFRVYDKSMEGFQSPGVKSVCNLAQKLFLVTAAGLFATLFLLHR
QFVNEPGCLGELLEEAARAEGVLIPASSSSGGNVRSDGRTIGSITANNTK
GTVEVSDDGAIIDPGREEGTVIGDAAGEGEGDSRKEDEEDDGDNHPARIR
MPSGAWMPYDVMIGVSIGGGHGSSGRQEVGEADGGGVGAAAAGLGGNSSE
MAANGTSFSADYTFAFEPIVLLLPDKLQQSHDFRWVRATV
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