prot_M-pyrifera_M_contig882.20490.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig882.20490.1
Unique Nameprot_M-pyrifera_M_contig882.20490.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length90
Homology
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BLAST of mRNA_M-pyrifera_M_contig882.20490.1 vs. uniprot
Match: D7FIG6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIG6_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 9.930e-33
Identity = 70/89 (78.65%), Postives = 77/89 (86.52%), Query Frame = 0 
Query:    1 RVRLSLWVRDKGLALLSSSAV-ISLYKTLSSERPVERRKASACLSRVGRAVTSVQANEKEREADSQKIKDAVLPLLQFQAEAGGGSVAE 88
            RVR SLW+RDK LALLSSS V +SLYK LSSE  VERRKASAC+SR+GRAVT+VQANEKEREADS  IK+AV PLL FQ EAGGGSVA+
Sbjct:  409 RVRASLWLRDKALALLSSSPVLVSLYKALSSEEAVERRKASACISRIGRAVTAVQANEKEREADSNAIKEAVKPLLHFQPEAGGGSVAD 497
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig882.20490.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIG6_ECTSI9.930e-3378.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..90
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig882contigM-pyrifera_M_contig882:29038..30445 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig882.20490.1mRNA_M-pyrifera_M_contig882.20490.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig882 29038..30447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig882.20490.1 ID=prot_M-pyrifera_M_contig882.20490.1|Name=mRNA_M-pyrifera_M_contig882.20490.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp
RVRLSLWVRDKGLALLSSSAVISLYKTLSSERPVERRKASACLSRVGRAV
TSVQANEKEREADSQKIKDAVLPLLQFQAEAGGGSVAETK
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