prot_M-pyrifera_M_contig879.20430.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig879.20430.1
Unique Nameprot_M-pyrifera_M_contig879.20430.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length278
Homology
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BLAST of mRNA_M-pyrifera_M_contig879.20430.1 vs. uniprot
Match: D8LKX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX3_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 2.080e-87
Identity = 148/220 (67.27%), Postives = 177/220 (80.45%), Query Frame = 0 
Query:   53 VHLSRMGMEEEGKLLGSISLLLGSVMVVGALCGAAGVSFSTDDGGRLPLLAAVYLSAPLSLADLVAAITFAAERSKVLRMDLEHEEHRGMRPAPGPXXXXXXXXENDPESRADSFRRLYDAFLFLALAFTVLEALMLRLGRRRLAAAAMRRKGRVGEGGFLATGA-LESLLDEEDLRQTGWEDWAGESVQQQNLVMEQRYEQLRRKNSERNEGLLEQTRG 271
            +HL+R+G+E EGKLLGSI+L+LGS+M +GALCGAAG  FS D+GGRLPLL AVYLSAPLSLADL+A +TF  +RS+VLR+DLEHE+ RG RP PGP         +DPES+ADSFRRLYDAFL +ALAF+VLEALM RLG RR+AA A R +   G G  L  G+ +ESLLDEED+R+ GWEDW G++VQQ  L+MEQRYEQLRR N E+NEGLLE TRG
Sbjct:    1 MHLNRIGLEGEGKLLGSIALVLGSMMAIGALCGAAGTMFSADEGGRLPLLGAVYLSAPLSLADLIAGVTFIVKRSEVLRLDLEHEQSRGGRPHPGPPSPVPGG--DDPESQADSFRRLYDAFLCMALAFSVLEALMFRLGSRRIAANAERHRRAQGFGESLVYGSGMESLLDEEDVRRNGWEDWRGDTVQQ-GLMMEQRYEQLRRSNLEKNEGLLEHTRG 217
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig879.20430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKX3_ECTSI2.080e-8767.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 237..257
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..192
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..65
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 193..277
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 125..172
NoneNo IPR availableTMHMMTMhelixcoord: 30..52
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 170..192
NoneNo IPR availableTMHMMTMhelixcoord: 67..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig879contigM-pyrifera_M_contig879:18669..23920 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig879.20430.1mRNA_M-pyrifera_M_contig879.20430.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig879 18669..23920 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig879.20430.1 ID=prot_M-pyrifera_M_contig879.20430.1|Name=mRNA_M-pyrifera_M_contig879.20430.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=278bp
MRHNNALRRSWAKRVRQDNSFRADAPSPTFVPLTLFRGLGGVAFLCFGEL
FWVHLSRMGMEEEGKLLGSISLLLGSVMVVGALCGAAGVSFSTDDGGRLP
LLAAVYLSAPLSLADLVAAITFAAERSKVLRMDLEHEEHRGMRPAPGPPG
PDPDPEENDPESRADSFRRLYDAFLFLALAFTVLEALMLRLGRRRLAAAA
MRRKGRVGEGGFLATGALESLLDEEDLRQTGWEDWAGESVQQQNLVMEQR
YEQLRRKNSERNEGLLEQTRGGDKNRL*
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