prot_M-pyrifera_M_contig87710.20375.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig87710.20375.1
Unique Nameprot_M-pyrifera_M_contig87710.20375.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length65
Homology
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BLAST of mRNA_M-pyrifera_M_contig87710.20375.1 vs. uniprot
Match: D8LD89_ECTSI (Prenyltransferase, UbiA family, Putative 4-hydroxybenzoate octaprenyltransferase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD89_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.510e-13
Identity = 54/65 (83.08%), Postives = 57/65 (87.69%), Query Frame = 0 
Query:    1 ATQATIVASVALTFAYTPLLKPIPVVKNFVVSAVXXXXXXXXXXXXXXXXXATLTPSVLTFFVIG 65
            A QATIVASVALT AYTPLLKPIP+VKNFVV+ V XXXXXXXXXXXX    +TLTPSVLTFFVIG
Sbjct:  120 ALQATIVASVALTLAYTPLLKPIPLVKNFVVAMVIXXXXXXXXXXXXAGVASTLTPSVLTFFVIG 184
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BLAST of mRNA_M-pyrifera_M_contig87710.20375.1 vs. uniprot
Match: A0A6H5LBF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBF2_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 4.500e-13
Identity = 42/65 (64.62%), Postives = 45/65 (69.23%), Query Frame = 0 
Query:    1 ATQATIVASVALTFAYTPLLKPIPVVKNFVVSAVXXXXXXXXXXXXXXXXXATLTPSVLTFFVIG 65
            A QATIVASVALT AYTPLLKPIP+VKNFVV+ V                 +TLTPSVLTFFVIG
Sbjct:  238 ALQATIVASVALTLAYTPLLKPIPLVKNFVVAMVIAAAIGAGGLAAGAGVASTLTPSVLTFFVIG 302
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87710.20375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD89_ECTSI1.510e-1383.08Prenyltransferase, UbiA family, Putative 4-hydroxy... [more]
A0A6H5LBF2_9PHAE4.500e-1364.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..28
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 33..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87710contigM-pyrifera_M_contig87710:463..657 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87710.20375.1mRNA_M-pyrifera_M_contig87710.20375.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig87710 463..657 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig87710.20375.1 ID=prot_M-pyrifera_M_contig87710.20375.1|Name=mRNA_M-pyrifera_M_contig87710.20375.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=65bp
ATQATIVASVALTFAYTPLLKPIPVVKNFVVSAVVAAAIAAGGLAAGAGA
AATLTPSVLTFFVIG
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