prot_M-pyrifera_M_contig87624.20351.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig87624.20351.1
Unique Nameprot_M-pyrifera_M_contig87624.20351.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length62
Homology
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BLAST of mRNA_M-pyrifera_M_contig87624.20351.1 vs. uniprot
Match: D8LEM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM9_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 1.270e-19
Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 0 
Query:    1 NAFLPLLFQSPFLNGVPLRYAVSAGWLRGVCFDLSNKTYNLVVRVPPERREDPPEGAGPHPP 62
            +AF     +SPFL+G PLRYAVSAGWL+GVC+DL+NK +NL VRVP  RREDPP+GA   PP
Sbjct:  157 HAFQQRFGKSPFLDGTPLRYAVSAGWLKGVCYDLTNKCFNLTVRVPAGRREDPPDGAPTFPP 218
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87624.20351.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEM9_ECTSI1.270e-1966.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87624contigM-pyrifera_M_contig87624:500..685 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87624.20351.1mRNA_M-pyrifera_M_contig87624.20351.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig87624 500..685 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig87624.20351.1 ID=prot_M-pyrifera_M_contig87624.20351.1|Name=mRNA_M-pyrifera_M_contig87624.20351.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=62bp
NAFLPLLFQSPFLNGVPLRYAVSAGWLRGVCFDLSNKTYNLVVRVPPERR
EDPPEGAGPHPP
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