prot_M-pyrifera_M_contig87588.20344.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig87588.20344.1
Unique Nameprot_M-pyrifera_M_contig87588.20344.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length116
Homology
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A5J4XRF7_9CHLO (tRNA dihydrouridine synthase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XRF7_9CHLO)

HSP 1 Score: 124 bits (311), Expect = 3.310e-31
Identity = 61/116 (52.59%), Postives = 80/116 (68.97%), Query Frame = 0
Query:    1 MMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAMMD 116
            MM+ T + FR+LCR++S+ T LYTEMVV  TL  +P+   R L  P  QHP+  QLGG++P  L  A +     GYDEINLNCGCPS +VAG G FGAA+ML+P+  A+C +AM +
Sbjct:   67 MMDWTDLHFRQLCRLISKQTWLYTEMVVDQTLLHNPDTD-RFLWFPPEQHPIVCQLGGSNPKTLAAAAKVVAKYGYDEINLNCGCPSERVAGAGCFGAAMMLQPQLVAQCCQAMQE 181          
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A383V9N4_TETOB (Dus domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V9N4_TETOB)

HSP 1 Score: 123 bits (309), Expect = 9.480e-31
Identity = 63/116 (54.31%), Postives = 78/116 (67.24%), Query Frame = 0
Query:    1 MMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAMMD 116
            MME T V +R+L R+LS+HT L+TEMVV  T+  H     + L  P  QHP+ LQLGG+DP  L  A + A   GYDEINLNCGCPS +VAG G FGAALML+P+  A C+ A+  
Sbjct:   35 MMEWTDVHYRQLARLLSKHTWLWTEMVVDKTI-IHTPLLDKHLWFPPEQHPIVLQLGGSDPALLLQAAKVAATYGYDEINLNCGCPSDRVAGAGCFGAALMLQPELVADCMAAIQQ 149          
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A7J7Q4V4_9CHLO (tRNA-dihydrouridine synthase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q4V4_9CHLO)

HSP 1 Score: 120 bits (301), Expect = 9.640e-31
Identity = 62/115 (53.91%), Postives = 77/115 (66.96%), Query Frame = 0
Query:    2 MECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAMMD 116
            ME T V +R+L R+LS+ T L+TEMVV  T+  H     + L  P  QHP+ LQLGG+DPT L  A + A   GYDEINLNCGCPS +VAG G FGAALML+P+  A C+ A+  
Sbjct:    1 MEWTDVHYRQLARLLSKRTWLWTEMVVDKTI-IHTPLLDKHLWFPPEQHPIVLQLGGSDPTLLLQAAKVAATYGYDEINLNCGCPSDRVAGAGCFGAALMLQPELVADCMAAIQQ 114          
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A1D1ZTT2_AUXPR (Dus domain-containing protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZTT2_AUXPR)

HSP 1 Score: 123 bits (309), Expect = 1.210e-30
Identity = 64/114 (56.14%), Postives = 78/114 (68.42%), Query Frame = 0
Query:    1 MMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAM 114
            MM+ T + +R+L R++SRHT LYTEMVV  TL  +P+   R L  P  QHP+  QLGG+DP +L  A R     GYDEINLN GCPS +VAG G FGAALMLRP+  ARC  A+
Sbjct:   73 MMDWTDLHYRQLARMISRHTWLYTEMVVDKTLIHNPDHD-RFLWFPPEQHPIVCQLGGSDPDELAAAARIVAGYGYDEINLNVGCPSDRVAGAGCFGAALMLRPELVARCCAAI 185          
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: C1FGA1_MICCC (Dus domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FGA1_MICCC)

HSP 1 Score: 120 bits (302), Expect = 2.480e-30
Identity = 68/118 (57.63%), Postives = 76/118 (64.41%), Query Frame = 0
Query:    1 MMECTTVPFRELCRILSRHTKLYTEMVVCSTLWF--HPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAMMD 116
            MM+ TT  FR LCR+LSRHT LYTEM V  TL    HP    R L  P + HP  LQLGG+DP  +  A   A   GYDEINLNCGCPS KVAGKGAFGAALML P+     + AM +
Sbjct:   12 MMDYTTAHFRHLCRLLSRHTWLYTEMEVDQTLVHTDHPR-LDRYLDFPTATHPSVLQLGGSDPETMARATAVAAPYGYDEINLNCGCPSPKVAGKGAFGAALMLEPELVRDVVAAMRE 128          
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A061R677_9CHLO (tRNA-dihydrouridine synthase A n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R677_9CHLO)

HSP 1 Score: 121 bits (303), Expect = 3.890e-30
Identity = 63/114 (55.26%), Postives = 77/114 (67.54%), Query Frame = 0
Query:    1 MMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAM 114
            MM+ T V +R+L R+L++HT L+TEMVV STL        R L  PK Q P+ LQLGG++P +L  A   AL  GYDEINLNCGCPS +VAG G FGA+LML P+  A C  AM
Sbjct:   71 MMDWTDVYWRQLARMLTKHTWLWTEMVVDSTLIHQHPNNDRFLWFPKEQRPLVLQLGGSEPEKLARAAELALPYGYDEINLNCGCPSDRVAGAGCFGASLMLEPERVAACCAAM 184          
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A250XK34_9CHLO (Dus domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XK34_9CHLO)

HSP 1 Score: 122 bits (306), Expect = 3.890e-30
Identity = 61/116 (52.59%), Postives = 79/116 (68.10%), Query Frame = 0
Query:    1 MMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAMMD 116
            MM+CT + +R+L RI+S+ T L+TEMVV  T+  H     + L  P  QHP+  QLGG+DP  L  AV+  +  GYDEINLNCGCPS +VAG G FGA+LML+P   A C++AM D
Sbjct:   15 MMDCTDLHYRQLARIISKRTWLWTEMVVDKTI-LHTPFLDKFLWFPPEQHPIVCQLGGSDPATLAAAVKKVVEYGYDEINLNCGCPSDRVAGAGCFGASLMLQPDLVASCMKAMAD 129          
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A7S1T2X4_9CHLO (Hypothetical protein n=2 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T2X4_9CHLO)

HSP 1 Score: 121 bits (303), Expect = 5.730e-30
Identity = 62/114 (54.39%), Postives = 75/114 (65.79%), Query Frame = 0
Query:    1 MMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAM 114
            MM+ T + +R+L R+LS+HT L+TEMVV  TL        + L  P+ QHP+ LQLGG+DP  L  A   AL  GYDEINLNCGCPS +VAG G FGAALML P+    C  AM
Sbjct:  104 MMDWTDLHWRQLARMLSKHTWLWTEMVVDLTLVHQDPNLDKFLWFPEEQHPIVLQLGGSDPETLAKAAELALPYGYDEINLNCGCPSDRVAGSGCFGAALMLDPQRVGACCAAM 217          
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: E1ZGG3_CHLVA (tRNA-dihydrouridine synthase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZGG3_CHLVA)

HSP 1 Score: 119 bits (298), Expect = 6.340e-30
Identity = 61/115 (53.04%), Postives = 76/115 (66.09%), Query Frame = 0
Query:    2 MECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAMMD 116
            M+ T + +R+L R++SRHT LYTEMVV  T+  H     + L  P  QHP+  QLGG+DPT L  A       GYDEINLNCGCPS +VAG G FGAA+MLRP+  A C +AM +
Sbjct:    1 MDWTDLYYRQLARLISRHTWLYTEMVVDQTI-IHTPFIDKFLWFPPEQHPIVCQLGGSDPTLLARAAAIVERYGYDEINLNCGCPSDRVAGAGCFGAAMMLRPQLVADCCKAMRE 114          
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A7S3R3J5_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R3J5_DUNTE)

HSP 1 Score: 120 bits (302), Expect = 1.460e-29
Identity = 62/116 (53.45%), Postives = 78/116 (67.24%), Query Frame = 0
Query:    1 MMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAMMD 116
            MM+ T V +R+L R++SRHT L+TEMVV  T+   P    R L  PK Q P+ LQ+GG++P  L  A R A+  GYDEINLNCGCPS +VAG G FGA+LML P+    C+ AM D
Sbjct:   56 MMDWTDVHYRQLARLISRHTWLWTEMVVDKTILNSPHPD-RFLWFPKEQRPLVLQVGGSEPESLAAAARVAIEYGYDEINLNCGCPSDRVAGAGCFGASLMLEPELVGDCMRAMGD 170          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5J4XRF7_9CHLO3.310e-3152.59tRNA dihydrouridine synthase n=1 Tax=Trebouxia sp.... [more]
A0A383V9N4_TETOB9.480e-3154.31Dus domain-containing protein n=1 Tax=Tetradesmus ... [more]
A0A7J7Q4V4_9CHLO9.640e-3153.91tRNA-dihydrouridine synthase n=1 Tax=Scenedesmus s... [more]
A0A1D1ZTT2_AUXPR1.210e-3056.14Dus domain-containing protein n=3 Tax=Auxenochlore... [more]
C1FGA1_MICCC2.480e-3057.63Dus domain-containing protein (Fragment) n=1 Tax=M... [more]
A0A061R677_9CHLO3.890e-3055.26tRNA-dihydrouridine synthase A n=1 Tax=Tetraselmis... [more]
A0A250XK34_9CHLO3.890e-3052.59Dus domain-containing protein n=1 Tax=Chlamydomona... [more]
A0A7S1T2X4_9CHLO5.730e-3054.39Hypothetical protein n=2 Tax=Tetraselmis chuii Tax... [more]
E1ZGG3_CHLVA6.340e-3053.04tRNA-dihydrouridine synthase n=1 Tax=Chlorella var... [more]
A0A7S3R3J5_DUNTE1.460e-2953.45Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001269tRNA-dihydrouridine synthasePFAMPF01207Duscoord: 1..115
e-value: 3.5E-27
score: 95.3
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..116
e-value: 7.3E-27
score: 96.3
NoneNo IPR availablePANTHERPTHR42907:SF1FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEINcoord: 1..115
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 1..115
IPR004653tRNA-dihydrouridine(20/20a) synthasePANTHERPTHR42907FAMILY NOT NAMEDcoord: 1..115
IPR018517tRNA-dihydrouridine synthase, conserved sitePROSITEPS01136UPF0034coord: 79..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87588contigM-pyrifera_M_contig87588:445..792 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87588.20344.1mRNA_M-pyrifera_M_contig87588.20344.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig87588 445..801 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig87588.20344.1 ID=prot_M-pyrifera_M_contig87588.20344.1|Name=mRNA_M-pyrifera_M_contig87588.20344.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp
MMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQH
PVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAAL
MLRPKHTARCLEAMMD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001269tRNA_hU_synthase
IPR013785Aldolase_TIM
IPR004653DusA
IPR018517tRNA_hU_synthase_CS