prot_M-pyrifera_M_contig87411.20313.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig87411.20313.1
Unique Nameprot_M-pyrifera_M_contig87411.20313.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length173
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig87411.20313.1 vs. uniprot
Match: K3WMR8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMR8_GLOUD)

HSP 1 Score: 115 bits (289), Expect = 6.370e-28
Identity = 63/174 (36.21%), Postives = 93/174 (53.45%), Query Frame = 0 
Query:    6 RRMVAALWNPGKKYANTRHNAGEMVLRRFIEATAPLLSTDGQPVTFRRTKSGDAEIARTTFRFATPKDHVDSAMHDAPPVLA------HDIVDWTSKRRREKTASGDVPYPEVETTMLLPTEFINNSGPCIRAEMQRSSWRLKRNHSAVRKGDELCVMFDDYKLPFGKVQLLPK 173
            R+++  L NPG+KYA TRHN G M +  F++         G  + F+   S   ++AR    F   +  VD+   DA    A       D+V+ +SKRR++KT    VP+P+V   +LLPT ++N SG  ++  M    WRLK+N  A+ + DEL V+ DD  LPFG  +   K
Sbjct:   60 RKLIVGLGNPGEKYAKTRHNIGSMAVTHFLDTYVQ--DVLGTKLAFQHEASNHGDVARFAISF---QQDVDTDEDDATKGTAAYTYRVDDLVNCSSKRRKDKTLEEGVPHPDVNVALLLPTTYMNRSGVAVKTFMNAHHWRLKKNALALNRQDELLVVTDDVALPFGTCRFKSK 228
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87411.20313.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
K3WMR8_GLOUD6.370e-2836.21Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001328Peptidyl-tRNA hydrolasePFAMPF01195Pept_tRNA_hydrocoord: 8..170
e-value: 2.6E-14
score: 53.6
IPR001328Peptidyl-tRNA hydrolasePANTHERPTHR17224PEPTIDYL-TRNA HYDROLASEcoord: 3..170
IPR036416Peptidyl-tRNA hydrolase superfamilyGENE3D3.40.50.1470coord: 82..173
e-value: 6.6E-6
score: 27.6
IPR036416Peptidyl-tRNA hydrolase superfamilyGENE3D3.40.50.1470coord: 1..76
e-value: 3.7E-8
score: 35.0
IPR036416Peptidyl-tRNA hydrolase superfamilySUPERFAMILY53178Peptidyl-tRNA hydrolase-likecoord: 102..170
IPR036416Peptidyl-tRNA hydrolase superfamilySUPERFAMILY53178Peptidyl-tRNA hydrolase-likecoord: 6..41
NoneNo IPR availablePANTHERPTHR17224:SF1PEPTIDYL-TRNA HYDROLASE-RELATEDcoord: 3..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87411contigM-pyrifera_M_contig87411:194..770 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87411.20313.1mRNA_M-pyrifera_M_contig87411.20313.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig87411 194..770 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig87411.20313.1 ID=prot_M-pyrifera_M_contig87411.20313.1|Name=mRNA_M-pyrifera_M_contig87411.20313.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp
MVHHARRMVAALWNPGKKYANTRHNAGEMVLRRFIEATAPLLSTDGQPVT
FRRTKSGDAEIARTTFRFATPKDHVDSAMHDAPPVLAHDIVDWTSKRRRE
KTASGDVPYPEVETTMLLPTEFINNSGPCIRAEMQRSSWRLKRNHSAVRK
GDELCVMFDDYKLPFGKVQLLPK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001328Pept_tRNA_hydro
IPR036416Pept_tRNA_hydro_sf