prot_M-pyrifera_M_contig8731.20294.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8731.20294.1
Unique Nameprot_M-pyrifera_M_contig8731.20294.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length54
Homology
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BLAST of mRNA_M-pyrifera_M_contig8731.20294.1 vs. uniprot
Match: A0A6H5JLA9_9PHAE (HeH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA9_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 7.460e-10
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:    5 DDDWAVLSPAELKRKTVAQLKGYLDEEGVGYPGKVKKADLLDIVTSFLA 53
            D DW  LS   + RKTVA LK +LDEEG+ YP K+KKA+L+D+V + LA
Sbjct:  914 DGDWGALSAKAVGRKTVAALKEFLDEEGIDYPSKIKKAELVDMVLNMLA 962
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BLAST of mRNA_M-pyrifera_M_contig8731.20294.1 vs. uniprot
Match: D7FLN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN9_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.390e-9
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:    5 DDDWAVLSPAELKRKTVAQLKGYLDEEGVGYPGKVKKADLLDIVTSFLA 53
            D DW  LS   + RKTVA LK +LDEEG+ YP K+KKA+L+D+V + LA
Sbjct:  563 DGDWGALSAKAVGRKTVAALKEFLDEEGMDYPSKIKKAELVDMVLNMLA 611
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8731.20294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLA9_9PHAE7.460e-1057.14HeH domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FLN9_ECTSI1.390e-957.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025856HeH/LEM domainPFAMPF12949HeHcoord: 20..49
e-value: 5.5E-9
score: 35.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8731contigM-pyrifera_M_contig8731:10940..11101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8731.20294.1mRNA_M-pyrifera_M_contig8731.20294.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8731 10940..11101 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8731.20294.1 ID=prot_M-pyrifera_M_contig8731.20294.1|Name=mRNA_M-pyrifera_M_contig8731.20294.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=54bp
MEGVDDDWAVLSPAELKRKTVAQLKGYLDEEGVGYPGKVKKADLLDIVTS
FLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025856HeH/LEM_domain