prot_M-pyrifera_M_contig87287.20285.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig87287.20285.1
Unique Nameprot_M-pyrifera_M_contig87287.20285.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length249
Homology
BLAST of mRNA_M-pyrifera_M_contig87287.20285.1 vs. uniprot
Match: A0A224X5N6_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224X5N6_9HEMI)

HSP 1 Score: 151 bits (381), Expect = 5.230e-38
Identity = 75/190 (39.47%), Postives = 116/190 (61.05%), Query Frame = 0
Query:   58 QVVVPRTQIGKMLQECHNGRGSCHPGARKTELITQRKYYWPAWRNDVREYVAGCAACQATGPAPDRREGPMGSLSSRA-PWELVAMDMVGPMEETAEGYRWALVCIDHFSRYVIAEPIKQATAEVAATFFVERVVTKVGAPVRLLTDRGTNFTGRLFAEMARQCGVRRSTTTAYHPQGDGRAERVIGTLT 246
            +V+VP+++   ++   H    S HPGA++T    +  +YWP    D++EYV  C+ CQ     P     P+  ++  + P+E V++D+VGP+  TA G R+ L  ID FSRY  A P+K+ +AE  A  FV+ ++ + GAP R+LTD+G NFT  LF    ++ G+++  TTAYHP+G+G  ER+  TLT
Sbjct:  638 KVLVPKSKRELVMSHYHETAWSGHPGAKRTVQRVRASFYWPQMNKDIKEYVRACSVCQER-KTPAGLRVPLAEVNEASRPFEQVSLDIVGPLPRTAAGNRYLLTMIDWFSRYAEAVPLKEQSAEETARAFVDVLILRHGAPERVLTDQGRNFTSELFRATCKRLGIKKLQTTAYHPEGNGLVERLHRTLT 826          
BLAST of mRNA_M-pyrifera_M_contig87287.20285.1 vs. uniprot
Match: A0A224XGU7_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XGU7_9HEMI)

HSP 1 Score: 151 bits (381), Expect = 5.230e-38
Identity = 80/207 (38.65%), Postives = 117/207 (56.52%), Query Frame = 0
Query:   40 LFTWNGETLRRTPAEGWDQVVVPRTQIGKMLQECHNGRGSCHPGARKTELITQRKYYWPAWRNDVREYVAGCAACQATGPAPDRREGPMGS-LSSRAPWELVAMDMVGPMEETAEGYRWALVCIDHFSRYVIAEPIKQATAEVAATFFVERVVTKVGAPVRLLTDRGTNFTGRLFAEMARQCGVRRSTTTAYHPQGDGRAERVIGTL 245
            +  WN   L +       +VVVP +    ++Q  H+   + HPG  +T    Q  YYWP+ R DV EYV  C +C      P+    P+     +R P+E VA+D+VGP+  T++GY++ L  IDHFSR+  A P+++ TAE  A  +VE ++ + G P RLLTD+G NF   LF  + R  G+ +  TTAYHP+ +G  ER+  TL
Sbjct:  631 VMYWNSAPLGK-------RVVVPASLRAAVIQHGHDAVWAGHPGIERTVARLQDHYYWPSLRRDVTEYVQQCTSCLER-KTPNNLRVPLAEPYQARRPFEQVALDIVGPLPTTSDGYKYILTFIDHFSRFAEAIPLREITAEATARAWVELIILRYGTPKRLLTDQGRNFVSDLFKSVCRFLGISKVQTTAYHPECNGMIERLHRTL 829          
BLAST of mRNA_M-pyrifera_M_contig87287.20285.1 vs. uniprot
Match: A0A0P4VUG6_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhodnius neglectus TaxID=72488 RepID=A0A0P4VUG6_9HEMI)

HSP 1 Score: 148 bits (373), Expect = 2.630e-37
Identity = 90/240 (37.50%), Postives = 131/240 (54.58%), Query Frame = 0
Query:    8 DPFCRDVVDYLERTAKGENPQRPRTIARKELELFTWNGETLRRTPAEGWDQVVVPRTQIGKMLQECHNGRGSCHPGARKTELITQRKYYWPAWRNDVREYVAGCAACQATGPAPDRREGPM--GSLSSRAPWELVAMDMVGPMEETAEGYRWALVCIDHFSRYVIAEPIKQATAEVAATFFVERVVTKVGAPVRLLTDRGTNFTGRLFAEMARQCGVRRSTTTAYHPQGDGRAERVIGTL 245
            D +CR +++   R  KGEN    R                 R+     W +V+VP     K+L++ H+   S HPG  +T    ++K+YWP     + E+V  C  CQ    +P   + P+  G   SR P+ELVA+D+VGP+  T+ G R+ L CID FSRY  A P+++ +A+  A  FVE +V + G P R+LTD+G NFT  LF    +  G+++  TTAYHPQG+G  ER+  TL
Sbjct:  403 DDWCRTLMEER-RAEKGENGLWYRVD---------------RKGSRANW-RVLVPAVMREKVLRQFHSTAWSGHPGPARTTSRLKKKFYWPQMGKQITEFVKACRICQER-KSPAGLQVPLAPGDQVSR-PFELVALDIVGPLPLTSAGNRYLLTCIDCFSRYAEAIPLREQSADQTARAFVEELVLRHGIPQRVLTDQGRNFTSELFRGACKLLGIQKLQTTAYHPQGNGMVERLHKTL 623          
BLAST of mRNA_M-pyrifera_M_contig87287.20285.1 vs. uniprot
Match: A0A224X5T9_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224X5T9_9HEMI)

HSP 1 Score: 148 bits (374), Expect = 4.480e-37
Identity = 91/251 (36.25%), Postives = 133/251 (52.99%), Query Frame = 0
Query:    2 VEHVRADPFCRDVVDYLERTAKGENPQRPRTIARKELELFTWNGETLRRTPAEGWDQVVVPRTQIGKMLQECHNGRGSCHPGARKTELITQRKYYWPAWRNDVREYVAGCAACQATGPAPDRREGPMG-------SLSSRAPWELVAMDMVGPMEETAEGYRWALVCIDHFSRYVIAEPIKQATAEVAATFFVERVVTKVGAPVRLLTDRGTNFTGRLFAEMARQCGVRRSTTTAYHPQGDGRAERVIGTL 245
            V  V   P  R++    ER    +   +  +  R E  L+ W   T  +    GW +V+VP     ++L + H+   S HPG  +T    + K+YWP  +  V+++V  C  CQ        R+ P+G          +  P+ELV++D+VGP+  ++ G R+ L  ID+FSRY  A PIK  +AE  A  FVE VV + GAP +LLTD+G NFT  LF    +  G+R+  T+AYHPQG+G  ER+  TL
Sbjct:  575 VAAVEGSPDGRELALAQERDEWCQAAIQEGSAKRGESGLWYW---TFGKRDRAGW-KVLVPAKLRERILTQFHSTAWSGHPGPERTIKRIKNKFYWPKMKKHVKDFVRACRLCQ-------ERKSPVGLQVPLTPEYRASRPFELVSLDVVGPLPLSSSGNRFLLTFIDYFSRYAEAIPIKDQSAEETARAFVEGVVLRHGAPQQLLTDQGRNFTSGLFRAACKLLGIRKLQTSAYHPQGNGMVERLHRTL 814          
BLAST of mRNA_M-pyrifera_M_contig87287.20285.1 vs. uniprot
Match: A0A5J4NQX1_9TREM (RNA-directed DNA polymerase n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NQX1_9TREM)

HSP 1 Score: 148 bits (373), Expect = 6.620e-37
Identity = 72/188 (38.30%), Postives = 111/188 (59.04%), Query Frame = 0
Query:   58 QVVVPRTQIGKMLQECHNGRGSCHPGARKTELITQRKYYWPAWRNDVREYVAGCAACQATGPAPDRREGPMGSLSSRAPWELVAMDMVGPMEETAEGYRWALVCIDHFSRYVIAEPIKQATAEVAATFFVERVVTKVGAPVRLLTDRGTNFTGRLFAEMARQCGVRRSTTTAYHPQGDGRAERVIGTL 245
            Q+VVP + +  +LQE H   G  H G  K E   +R+++WP  R DV++  + C  C        ++  P+ S+ +  P E+V +D+VGP+ ET  G R+ LV +DHF+++  A P+ +A     A F  +  +++ GAP +L TDRG+NF   +  E+ R  G+R++ TTAYHPQG+G  ERV  TL
Sbjct:  993 QIVVPESAVRSVLQELHENLG--HAGQNKLEEAAKRRFWWPHQRRDVKDVCSSCGLCAQIKNPKRQQCAPLQSMLTGYPNEIVEVDIVGPLPETTRGNRYILVMVDHFTKWCEAVPVPRADGGTTAKFIFDHWISRWGAPTQLHTDRGSNFESTMMHELCRILGIRKTRTTAYHPQGNGAVERVNRTL 1178          
BLAST of mRNA_M-pyrifera_M_contig87287.20285.1 vs. uniprot
Match: A0A224XGW9_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XGW9_9HEMI)

HSP 1 Score: 147 bits (371), Expect = 1.130e-36
Identity = 90/255 (35.29%), Postives = 130/255 (50.98%), Query Frame = 0
Query:   15 VDYLERTAKGEN--PQRPRTIARKELELFTWNGETLRRTPAEG-----------------WDQVVVPRTQIGKMLQECHNGRGSCHPGARKTELITQRKYYWPAWRNDVREYVAGCAACQATGPAPDRREGPMGSLSS-RAPWELVAMDMVGPMEETAEGYRWALVCIDHFSRYVIAEPIKQATAEVAATFFVERVVTKVGAPVRLLTDRGTNFTGRLFAEMARQCGVRRSTTTAYHPQGDGRAERVIGTLTRRL 249
            VD L R  +  N  P  P    R+  E  TW  E   +T  E                  W +V+VP  +   ++  CH+ R S HPG ++T    +  ++WP     +R +V  C  CQ     P   + P+  ++    P+E V++D+VGP+  T  G R+ L  ID FSRY  A P+K  TAEV A  FVE +V + GAP R+LTD+G NFT  +F  + +  G+++  T+AYHPQG+G  ER+  TL   L
Sbjct:  579 VDALSRATRVVNVTPGEPEDEWRRAQEHDTWCQEMASQTTVEKAGNGLLYLKTREGDQSRW-KVLVPVVKRDTVMNLCHSTRWSGHPGVKRTCQRIRATFFWPRMEKHIRNFVRACQICQER-RTPAGLQVPLAEVAEVTRPFEQVSLDIVGPLPTTKAGNRYVLTIIDWFSRYAEAVPLKDQTAEVCARAFVEHLVLRHGAPDRILTDQGRNFTSEMFKLVCKNLGIKKLQTSAYHPQGNGLVERLHRTLVHSL 831          
BLAST of mRNA_M-pyrifera_M_contig87287.20285.1 vs. uniprot
Match: A0A147BAZ1_IXORI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A147BAZ1_IXORI)

HSP 1 Score: 147 bits (370), Expect = 1.550e-36
Identity = 86/239 (35.98%), Postives = 124/239 (51.88%), Query Frame = 0
Query:    8 DPFCRDVVDYLERTAKGENPQRPRTIARKELELFTWNGETLRRTPAEGWDQVVVPRTQIGKMLQECHNGRGSCHPGARKTELITQRKYYWPAWRNDVREYVAGCAACQATGPAPDRREGPMGSLSS-RAPWELVAMDMVGPMEETAEGYRWALVCIDHFSRYVIAEPIKQATAEVAATFFVERVVTKVGAPVRLLTDRGTNFTGRLFAEMARQCGVRRSTTTAYHPQGDGRAERVIGTL 245
            DP  R + D L       N    +   R  + L    G   R   A   ++ V+P++ + K+L   HN   S H G +KT      KY W     DV+ Y A C +CQ    +  RR  P+      + P+E  A+D+VGP+  T EG ++ LV +DHF+++  A P++   AE  A  FVER+V + G P +LLTD+GTNF   L  E  R  GV++ TTTAYHP+ +G  ER+  T+
Sbjct:  687 DPELRKISDRL-----AGNDSDDQGYFRDRMGLLRKGGPGQREGRAR--ERTVIPKSLVEKVLYAYHNAPYSGHFGFKKTLRKITAKYVWRGMHRDVKSYCASCESCQLR-KSGQRRRAPLELFGEVKEPFERTALDIVGPLPITTEGNKYVLVFVDHFTKFAEALPLRDQKAETVARAFVERIVLRHGVPQQLLTDQGTNFVSGLMKETCRLLGVKKLTTTAYHPESNGAVERLNKTI 917          
BLAST of mRNA_M-pyrifera_M_contig87287.20285.1 vs. uniprot
Match: A0A0P5YDH1_9CRUS (RNA-directed DNA polymerase (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5YDH1_9CRUS)

HSP 1 Score: 137 bits (345), Expect = 1.640e-35
Identity = 76/194 (39.18%), Postives = 109/194 (56.19%), Query Frame = 0
Query:   59 VVVPRTQIGKMLQECHNGRGSCHPGARKTELITQRKYYWPAWRNDVREYVAGCAACQATGPAPDRREGPMGSLSSRAP-------WELVAMDMVGPMEETAEGYRWALVCIDHFSRYVIAEPIKQATAEVAATFFVERVVTKVGAPVRLLTDRGTNFTGRLFAEMARQCGVRRSTTTAYHPQGDGRAERVIGTL 245
            +V P   + ++L+E H+   + H G  KT    QR+Y WP  R  V EYV  C  C       ++R+   GS +   P       WE +AMD+VGP++E+A+GYR+ LV  D+ SR+V   P++  TA+  A   V ++ TK G+P  +LTD+GTNF   L  E+ +   V++  TTAYHPQ DG  ER   TL
Sbjct:   26 IVTPVRLVPQILKENHDHILAGHLGVGKTLARLQRQYTWPCMRTSVIEYVKSCLMC-------NKRKAVGGSKAPLHPLPLVEGVWERIAMDIVGPIQESAKGYRYILVISDYASRFVFTVPMRNQTAQTIAKILVNKIFTKYGSPEVVLTDQGTNFLSSLIQEVCKLFKVKQIRTTAYHPQTDGLVERFNRTL 212          
BLAST of mRNA_M-pyrifera_M_contig87287.20285.1 vs. uniprot
Match: A0A815ZTH5_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815ZTH5_9BILA)

HSP 1 Score: 135 bits (341), Expect = 3.050e-35
Identity = 70/184 (38.04%), Postives = 100/184 (54.35%), Query Frame = 0
Query:   66 IGKMLQECHNGRGSCHPGARKTELITQRKYYWPAWRNDVREYVAGCAACQATGPAPDRREGPMGSLSSRAP----WELVAMDMVGPMEETAEGYRWALVCIDHFSRYVIAEPIKQATAEVAATFFVERVVTKVGAPVRLLTDRGTNFTGRLFAEMARQCGVRRSTTTAYHPQGDGRAERVIGTL 245
            + ++LQ  H+   S H G  KT    + +Y+WP     ++EYV  C  C+        R  P G L    P     +L+ +D +GP+ ++A G ++ LVC D+ SRY I +     TAE AA F V +V+ + G P +LLTDRGT+F   +F  +A +CGV   TTT YHPQ +G  ER   TL
Sbjct:    2 VDQLLQAYHDSPTSGHLGVNKTWHKIRDRYFWPGMYTKIKEYVLSCTKCRQFKIG---RTKPAGKLEPTEPPTGILDLIGLDFIGPVPQSANGNKYILVCTDYLSRYAITQATANCTAETAAKFLVTKVILQYGVPKQLLTDRGTHFMSHVFEAIASRCGVNHITTTTYHPQCNGLTERFNATL 182          
BLAST of mRNA_M-pyrifera_M_contig87287.20285.1 vs. uniprot
Match: W8B595_CERCA (RNA-directed DNA polymerase n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8B595_CERCA)

HSP 1 Score: 142 bits (358), Expect = 6.100e-35
Identity = 73/191 (38.22%), Postives = 106/191 (55.50%), Query Frame = 0
Query:   59 VVVPRTQIGKMLQECHNGRGSCHPGARKTELITQRKYYWPAWRNDVREYVAGCAACQATGPAPDRREGPMGSLSSRAPWELVAMDMVGPMEETAEGYRWALVCIDHFSRYVIAEPIKQATAEVAATFFVERVVTKVGAPVRLLTDRGTNFTGRLFAEMARQCGVRRSTTTAYHPQGDGRAERVIGTLTRRL 249
            +VVP+ +I  +L+E HNG    H G  KT    ++++YW   R  V E++A C  C A      R  G M   ++ AP+E VAMD+ GP   + +G ++ LV +D+FS++    PI    A+  A  F    VT+ GAP+ L +D+G NF   +F EM +  G+R++ TTA HPQ DG  ER   TL   L
Sbjct:  711 IVVPKLRIPDVLKEFHNGPSGGHLGITKTLEKIKQRFYWVGCRQSVAEWIANCTECIAAKGPKSRSHGQMKQYNAGAPFERVAMDVAGPFPMSKQGNKYVLVVMDYFSKWPEVYPIPNQEAKTVADAFTNNWVTRYGAPIELHSDQGRNFESAVFQEMCQILGIRKTRTTALHPQSDGMVERFNRTLEEHL 901          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87287.20285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A224X5N6_9HEMI5.230e-3839.47RNA-directed DNA polymerase (Fragment) n=1 Tax=Pan... [more]
A0A224XGU7_9HEMI5.230e-3838.65RNA-directed DNA polymerase (Fragment) n=1 Tax=Pan... [more]
A0A0P4VUG6_9HEMI2.630e-3737.50RNA-directed DNA polymerase (Fragment) n=1 Tax=Rho... [more]
A0A224X5T9_9HEMI4.480e-3736.25RNA-directed DNA polymerase (Fragment) n=1 Tax=Pan... [more]
A0A5J4NQX1_9TREM6.620e-3738.30RNA-directed DNA polymerase n=1 Tax=Paragonimus we... [more]
A0A224XGW9_9HEMI1.130e-3635.29RNA-directed DNA polymerase (Fragment) n=1 Tax=Pan... [more]
A0A147BAZ1_IXORI1.550e-3635.98RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixo... [more]
A0A0P5YDH1_9CRUS1.640e-3539.18RNA-directed DNA polymerase (Fragment) n=1 Tax=Dap... [more]
A0A815ZTH5_9BILA3.050e-3538.04Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
W8B595_CERCA6.100e-3538.22RNA-directed DNA polymerase n=1 Tax=Ceratitis capi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 130..249
e-value: 6.1E-36
score: 125.5
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 61..117
e-value: 5.4E-16
score: 58.4
NoneNo IPR availableGENE3D1.10.340.70coord: 27..118
e-value: 5.1E-14
score: 54.2
NoneNo IPR availablePANTHERPTHR24559:SF275coord: 57..245
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 57..245
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 135..248
e-value: 2.7E-20
score: 72.7
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 132..249
score: 22.754
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 134..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87287contigM-pyrifera_M_contig87287:13..759 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87287.20285.1mRNA_M-pyrifera_M_contig87287.20285.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig87287 13..759 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig87287.20285.1 ID=prot_M-pyrifera_M_contig87287.20285.1|Name=mRNA_M-pyrifera_M_contig87287.20285.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=249bp
WVEHVRADPFCRDVVDYLERTAKGENPQRPRTIARKELELFTWNGETLRR
TPAEGWDQVVVPRTQIGKMLQECHNGRGSCHPGARKTELITQRKYYWPAW
RNDVREYVAGCAACQATGPAPDRREGPMGSLSSRAPWELVAMDMVGPMEE
TAEGYRWALVCIDHFSRYVIAEPIKQATAEVAATFFVERVVTKVGAPVRL
LTDRGTNFTGRLFAEMARQCGVRRSTTTAYHPQGDGRAERVIGTLTRRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR041588Integrase_H2C2
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf