prot_M-pyrifera_M_contig8702.20233.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8702.20233.1
Unique Nameprot_M-pyrifera_M_contig8702.20233.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length128
Homology
BLAST of mRNA_M-pyrifera_M_contig8702.20233.1 vs. uniprot
Match: A0A6H5KQ72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ72_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 6.900e-74
Identity = 114/127 (89.76%), Postives = 119/127 (93.70%), Query Frame = 0
Query:    2 AIQARALVFSGAPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTKGLYLEHKEVGIAQYLLTTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRIVDIAYVCSVCLSVFCEFSPVCT 128
            A  ARALV SG+PDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLT GLYLEH+ VG+AQY+  TFLPSQSCRKYLKLR QQSVDFRAACFCHKR+VDIAYVCSVCLSVFCEFSPVCT
Sbjct:  160 ASPARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTGGLYLEHQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCT 286          
BLAST of mRNA_M-pyrifera_M_contig8702.20233.1 vs. uniprot
Match: A0A835ZC01_9STRA (Putative general transcription factor IIH subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC01_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.520e-49
Identity = 77/126 (61.11%), Postives = 98/126 (77.78%), Query Frame = 0
Query:    2 AIQARALVFSGAPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTKGLYLEHKEVGIAQYLLTTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRIVDIAYVCSVCLSVFCEFSPVC 127
            ++Q R LV    PD PE+YN+VMN IFSAQKA + VDC  +G  S F+QQAA +T G+Y   +E  + Q LLT  LPSQ+CRKYL+ + Q++VDFRAACFCH+R+++IAYVCSVCLSVFCEFSP+C
Sbjct:  146 SVQTRLLVVQAGPDAPESYNAVMNCIFSAQKAQIPVDCLCVGPDSVFMQQAADVTGGVYCHVQEPNVLQQLLTLILPSQACRKYLRTKGQETVDFRAACFCHRRLIEIAYVCSVCLSVFCEFSPIC 271          
BLAST of mRNA_M-pyrifera_M_contig8702.20233.1 vs. uniprot
Match: K3WG36_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WG36_GLOUD)

HSP 1 Score: 146 bits (368), Expect = 1.290e-40
Identity = 74/128 (57.81%), Postives = 92/128 (71.88%), Query Frame = 0
Query:    3 IQARALVFSGAPDVPETYNSVMNAIFSAQKAGVLVDCAVLG-ESSTFLQQAAYLTKGLYLEHKE-VGIAQYLLTTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRIVDIAYVCSVCLSVFCEFSPVCT 128
            ++ R LV   +PDV E Y S+MN IFSAQK GV VD  VL  + S+FLQQAAYLT G+Y +  +  G+ QYLL+ +LP  S RK LKL  Q SVDFRA CFCHKR++  A+VC VCLS+FCEF P+C+
Sbjct:  161 LRPRILVIQKSPDVSEHYISIMNGIFSAQKKGVAVDACVLARDQSSFLQQAAYLTGGIYYKPNDHSGLLQYLLSIYLPDPSMRKLLKLPSQDSVDFRAMCFCHKRVISTAFVCPVCLSLFCEFQPICS 288          
BLAST of mRNA_M-pyrifera_M_contig8702.20233.1 vs. uniprot
Match: E1ZLF6_CHLVA (General transcription and DNA repair factor IIH subunit TFB4 (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZLF6_CHLVA)

HSP 1 Score: 140 bits (352), Expect = 2.560e-40
Identity = 72/126 (57.14%), Postives = 89/126 (70.63%), Query Frame = 0
Query:    5 ARALVFSGAPDVPETYNSVMNAIFSAQKAGVLVDCAVLGES-STFLQQAAYLTKGLYLE-HKEVGIAQYLLTTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRIVDIAYVCSVCLSVFCEFSPVCT 128
            AR L  + APDVP  Y SVMNAIFSAQ++GVL+D   LG   STFLQQAAYLT G+YL+  K V + QYL + F    + R++L++     VDFRA+CFCHKR +D+ YVCS CLS+FCE  P CT
Sbjct:    4 ARVLCLTAAPDVPSQYISVMNAIFSAQRSGVLIDACQLGRRHSTFLQQAAYLTGGVYLKPSKPVALVQYLNSVFAVDAATRQFLRMPGTAHVDFRASCFCHKRQIDLGYVCSACLSIFCEQLPACT 129          
BLAST of mRNA_M-pyrifera_M_contig8702.20233.1 vs. uniprot
Match: D7FYW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW4_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 1.210e-39
Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 0
Query:   55 LTKGLYLEHKEVGIAQYLLTTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRIVDIAYVCSVCLSVFCEFSPVCT 128
            L  GLYLEH+ VG+AQY+  TFLPSQSCRKYLKLR QQSVDFRAACFCHKR+VDIAYVCSVCLSVFCEFSPVCT
Sbjct:   15 LPGGLYLEHQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCT 88          
BLAST of mRNA_M-pyrifera_M_contig8702.20233.1 vs. uniprot
Match: A0A433QAY4_9FUNG (General transcription and DNA repair factor IIH subunit TFB4 n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QAY4_9FUNG)

HSP 1 Score: 144 bits (362), Expect = 1.640e-39
Identity = 73/128 (57.03%), Postives = 92/128 (71.88%), Query Frame = 0
Query:    3 IQARALVFSGAPDVPETYNSVMNAIFSAQKAGVLVD-CAVLGESSTFLQQAAYLTKGLYLEHKEV-GIAQYLLTTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRIVDIAYVCSVCLSVFCEFSPVCT 128
            I+ R L  S +PD    Y  +MN IFSAQK+ + VD C V GE + FLQQAA++T G+YL+ ++   + QYL+ TFLP +  R YL L  Q  VDFRAACFCHKRI+DI YVCSVCLS+FC+FSPVC+
Sbjct:  169 IKPRILAISVSPDSAFQYIPIMNCIFSAQKSSIPVDVCKVFGEDTVFLQQAAHITSGIYLKVEDPQSLLQYLMFTFLPDRYSRNYLCLPGQDQVDFRAACFCHKRIIDIGYVCSVCLSIFCDFSPVCS 296          
BLAST of mRNA_M-pyrifera_M_contig8702.20233.1 vs. uniprot
Match: A0A8H7Q334_MORIS (General transcription and DNA repair factor IIH subunit TFB4 (Fragment) n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q334_MORIS)

HSP 1 Score: 143 bits (361), Expect = 3.410e-39
Identity = 71/128 (55.47%), Postives = 91/128 (71.09%), Query Frame = 0
Query:    3 IQARALVFSGAPDVPETYNSVMNAIFSAQKAGVLVD-CAVLGESSTFLQQAAYLTKGLYLE-HKEVGIAQYLLTTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRIVDIAYVCSVCLSVFCEFSPVCT 128
            I+ R LV S +PD P  Y S+MNA+FSAQK  + +D C + G    FLQQAA++T G+YL+      + QYLL +FLP +  R YL L  ++ VDFRAACFCHKRI+DI YVCSVCLS+FC +SPVC+
Sbjct:  179 IKPRILVLSVSPDSPYQYISIMNAVFSAQKMSIPIDVCKIFGGEVAFLQQAAHITGGVYLDVENPQALLQYLLFSFLPERYARNYLNLPNKEQVDFRAACFCHKRIIDIGYVCSVCLSIFCSWSPVCS 306          
BLAST of mRNA_M-pyrifera_M_contig8702.20233.1 vs. uniprot
Match: A0A5D6XQC8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQC8_9STRA)

HSP 1 Score: 142 bits (357), Expect = 5.040e-39
Identity = 72/130 (55.38%), Postives = 91/130 (70.00%), Query Frame = 0
Query:    3 IQARALVFSGAPDVPETYNSVMNAIFSAQKAGVLVD-CAVLGESSTFLQQAAYLTKGLY---LEHKEVGIAQYLLTTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRIVDIAYVCSVCLSVFCEFSPVCT 128
            ++ R LV   +PDV + Y S+MN IFSAQK  V VD C +  E S+FLQQAAYLT G+Y   ++H   G+ QYLL+ +LP  S RK LKL  Q SVDFRA CFCHK ++  A+VC VCLS+FCEF P+C+
Sbjct:  157 LRPRVLVIQKSPDVAQHYISIMNGIFSAQKKSVAVDACVLASEHSSFLQQAAYLTGGIYYKPIDHS--GLLQYLLSIYLPDPSMRKLLKLPSQDSVDFRAMCFCHKEVISTAFVCPVCLSLFCEFQPICS 284          
BLAST of mRNA_M-pyrifera_M_contig8702.20233.1 vs. uniprot
Match: A0A662YF30_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YF30_9STRA)

HSP 1 Score: 140 bits (352), Expect = 2.690e-38
Identity = 69/128 (53.91%), Postives = 90/128 (70.31%), Query Frame = 0
Query:    3 IQARALVFSGAPDVPETYNSVMNAIFSAQKAGVLVDCAVLG-ESSTFLQQAAYLTKGLYLEHKEVG-IAQYLLTTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRIVDIAYVCSVCLSVFCEFSPVCT 128
            ++ R LV   APDV E Y ++MN IFSAQK  V VD  +L  E S+F+QQAAYLT G+Y +  + G + QYL++ +LP  S RK LKL  Q SVDFRA CFCH+ ++  A+VC VCLS+FCEF P+C+
Sbjct:  155 LRPRILVIQKAPDVSEHYIAIMNGIFSAQKKSVAVDACILSAEHSSFMQQAAYLTGGIYYKPNDAGGLLQYLISIYLPDPSMRKLLKLPSQDSVDFRAMCFCHREVISTAFVCPVCLSLFCEFRPICS 282          
BLAST of mRNA_M-pyrifera_M_contig8702.20233.1 vs. uniprot
Match: A0A3R6W0Y7_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6W0Y7_9STRA)

HSP 1 Score: 135 bits (340), Expect = 3.110e-38
Identity = 70/128 (54.69%), Postives = 87/128 (67.97%), Query Frame = 0
Query:    3 IQARALVFSGAPDVPETYNSVMNAIFSAQKAGVLVD-CAVLGESSTFLQQAAYLTKGLYLEHKEV-GIAQYLLTTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRIVDIAYVCSVCLSVFCEFSPVCT 128
            +Q R LV   +PD  E Y S+MN IFSAQK  V +D C +  E S FLQQA+YLT G+Y + KE  G+ QY L+ +L     R+ LKL  Q SVDFRA CFCHK+ +  A+VC VCLS+FCEFSPVC+
Sbjct:    7 LQPRILVVDSSPDFAEQYISIMNCIFSAQKKHVPIDSCVLASEPSAFLQQASYLTGGIYFKPKEPQGLVQYFLSIWLADADTRQMLKLPTQASVDFRAMCFCHKQTISTAFVCPVCLSLFCEFSPVCS 134          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8702.20233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQ72_9PHAE6.900e-7489.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZC01_9STRA2.520e-4961.11Putative general transcription factor IIH subunit ... [more]
K3WG36_GLOUD1.290e-4057.81Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
E1ZLF6_CHLVA2.560e-4057.14General transcription and DNA repair factor IIH su... [more]
D7FYW4_ECTSI1.210e-3986.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A433QAY4_9FUNG1.640e-3957.03General transcription and DNA repair factor IIH su... [more]
A0A8H7Q334_MORIS3.410e-3955.47General transcription and DNA repair factor IIH su... [more]
A0A5D6XQC8_9STRA5.040e-3955.38Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A662YF30_9STRA2.690e-3853.91Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A3R6W0Y7_9STRA3.110e-3854.69Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410coord: 1..79
e-value: 1.0E-23
score: 86.1
IPR004600TFIIH subunit Tfb4/GTF2H3PFAMPF03850Tfb4coord: 3..127
e-value: 1.6E-48
score: 165.6
IPR004600TFIIH subunit Tfb4/GTF2H3PANTHERPTHR12831TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATEDcoord: 3..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8702contigM-pyrifera_M_contig8702:2462..3610 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8702.20233.1mRNA_M-pyrifera_M_contig8702.20233.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8702 2462..3610 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8702.20233.1 ID=prot_M-pyrifera_M_contig8702.20233.1|Name=mRNA_M-pyrifera_M_contig8702.20233.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=128bp
MAIQARALVFSGAPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQ
QAAYLTKGLYLEHKEVGIAQYLLTTFLPSQSCRKYLKLRKQQSVDFRAAC
FCHKRIVDIAYVCSVCLSVFCEFSPVCT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf
IPR004600TFIIH_Tfb4/GTF2H3