prot_M-pyrifera_M_contig86722.20174.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86722.20174.1
Unique Nameprot_M-pyrifera_M_contig86722.20174.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length125
Homology
BLAST of mRNA_M-pyrifera_M_contig86722.20174.1 vs. uniprot
Match: A0A2D6UBN2_9ACTN (DNA-formamidopyrimidine glycosylase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6UBN2_9ACTN)

HSP 1 Score: 201 bits (510), Expect = 1.970e-62
Identity = 97/124 (78.23%), Postives = 105/124 (84.68%), Query Frame = 0
Query:    1 AFVQRSNRHLKTLLLGQRAVAGVGNIYADEALWMAGINPATRRLGRERADRLVVAVRDALQSGLDHGGTTLRDYVDSTGRTGANQHRLHCYGRSGEPCERCGTVLRRREVDARTTTWCPVCQAR 124
            AFV+RS+RHLKT+LL QRAVAGVGNIYADEALW A INPATRRL R+RAD LVVA+R AL+SGL HGGTTLRDYVDS G  G NQH L CYGR GEPC RCG  LR + +DARTTTWCPVCQAR
Sbjct:  157 AFVKRSDRHLKTILLAQRAVAGVGNIYADEALWDARINPATRRLSRQRADELVVAIRRALESGLAHGGTTLRDYVDSDGARGGNQHELACYGRGGEPCLRCGEELRTQVIDARTTTWCPVCQAR 280          
BLAST of mRNA_M-pyrifera_M_contig86722.20174.1 vs. uniprot
Match: A0A7K1Z8R1_9ACTN (Bifunctional DNA-formamidopyrimidine glycosylase/DNA-(Apurinic or apyrimidinic site) lyase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z8R1_9ACTN)

HSP 1 Score: 197 bits (500), Expect = 4.640e-61
Identity = 89/124 (71.77%), Postives = 106/124 (85.48%), Query Frame = 0
Query:    1 AFVQRSNRHLKTLLLGQRAVAGVGNIYADEALWMAGINPATRRLGRERADRLVVAVRDALQSGLDHGGTTLRDYVDSTGRTGANQHRLHCYGRSGEPCERCGTVLRRREVDARTTTWCPVCQAR 124
            AFV+RS+R++KTLLL QR VAG+GNIYADEA W+A INPA RRL  ERA+RLV  +R AL SG+ +GGTTLRDYVDS GR G NQH LHCYGR+GEPC+RCGT++RRR +DAR+TTWCP CQ+R
Sbjct:  146 AFVKRSDRYVKTLLLSQRPVAGIGNIYADEAFWLARINPAVRRLSPERAERLVEGIRTALDSGIKYGGTTLRDYVDSEGRQGTNQHELHCYGRAGEPCDRCGTIMRRRVLDARSTTWCPTCQSR 269          
BLAST of mRNA_M-pyrifera_M_contig86722.20174.1 vs. uniprot
Match: A0A6B1EHR6_9ACTN (Bifunctional DNA-formamidopyrimidine glycosylase/DNA-(Apurinic or apyrimidinic site) lyase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EHR6_9ACTN)

HSP 1 Score: 172 bits (435), Expect = 3.330e-51
Identity = 83/122 (68.03%), Postives = 93/122 (76.23%), Query Frame = 0
Query:    3 VQRSNRHLKTLLLGQRAVAGVGNIYADEALWMAGINPATRRLGRERADRLVVAVRDALQSGLDHGGTTLRDYVDSTGRTGANQHRLHCYGRSGEPCERCGTVLRRREVDARTTTWCPVCQAR 124
            ++ S R +KT LL QR VAGVGNIYADEALW+AG+NP+ R L R RA  L  A+R AL SGL HGGTTLRDY    G  G+NQH L CYGR+GEPCERCGT LRR+ VDAR TTWCPVCQ R
Sbjct:  150 LRASRRCVKTQLLSQRPVAGVGNIYADEALWLAGVNPSIRHLSRPRAGLLAGAIRTALASGLRHGGTTLRDYAALDGARGSNQHHLRCYGRAGEPCERCGTELRRKVVDARGTTWCPVCQRR 271          
BLAST of mRNA_M-pyrifera_M_contig86722.20174.1 vs. uniprot
Match: UPI001D0F4D3E (bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D0F4D3E)

HSP 1 Score: 172 bits (436), Expect = 5.090e-51
Identity = 81/122 (66.39%), Postives = 92/122 (75.41%), Query Frame = 0
Query:    3 VQRSNRHLKTLLLGQRAVAGVGNIYADEALWMAGINPATRRLGRERADRLVVAVRDALQSGLDHGGTTLRDYVDSTGRTGANQHRLHCYGRSGEPCERCGTVLRRREVDARTTTWCPVCQAR 124
            V    R +KT LL QR VAGVGNIYADEALW AG++P  RRL R  ADRL  AVR+ L+ G+DHGGTTLRDYVD+ G TG NQHRL CYGR+G+ C RCGT LR   +DAR+TTWCP CQ R
Sbjct:  178 VNAGRRRIKTALLSQRPVAGVGNIYADEALWRAGVDPRARRLTRAGADRLRDAVREVLREGIDHGGTTLRDYVDADGATGTNQHRLDCYGRAGQECHRCGTTLRGAVLDARSTTWCPTCQPR 299          
BLAST of mRNA_M-pyrifera_M_contig86722.20174.1 vs. uniprot
Match: A0A7X6P2F0_9ACTN (Bifunctional DNA-formamidopyrimidine glycosylase/DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6P2F0_9ACTN)

HSP 1 Score: 170 bits (431), Expect = 1.340e-50
Identity = 80/122 (65.57%), Postives = 96/122 (78.69%), Query Frame = 0
Query:    3 VQRSNRHLKTLLLGQRAVAGVGNIYADEALWMAGINPATRRLGRERADRLVVAVRDALQSGLDHGGTTLRDYVDSTGRTGANQHRLHCYGRSGEPCERCGTVLRRREVDARTTTWCPVCQAR 124
            ++ S RHLKT LL QR +AGVGNIYADEALW+AGI+PA R L R RA  L+ A+R  L +G++HGGTTLRDYVD+ G +G +QH L CYGR+GEPCERCG+ LRR  +DAR TTWC VCQ R
Sbjct:  148 LRSSGRHLKTDLLSQRPIAGVGNIYADEALWLAGIHPADRTLTRSRAAALLEAIRSVLAAGIEHGGTTLRDYVDAEGVSGGHQHHLWCYGRAGEPCERCGSPLRRAVIDARGTTWCGVCQPR 269          
BLAST of mRNA_M-pyrifera_M_contig86722.20174.1 vs. uniprot
Match: A0A7K2DCI2_9ACTN (Bifunctional DNA-formamidopyrimidine glycosylase/DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2DCI2_9ACTN)

HSP 1 Score: 170 bits (431), Expect = 2.200e-50
Identity = 82/119 (68.91%), Postives = 90/119 (75.63%), Query Frame = 0
Query:    6 SNRHLKTLLLGQRAVAGVGNIYADEALWMAGINPATRRLGRERADRLVVAVRDALQSGLDHGGTTLRDYVDSTGRTGANQHRLHCYGRSGEPCERCGTVLRRREVDARTTTWCPVCQAR 124
            S R +KT LL QR VAGVGNIYADEALW+A INPA R + + RA RL  A+R AL SGL HGGTTLRDY    G +G NQH L CYGR+GEPCERCGT LRRR +DAR TTWCP CQ R
Sbjct:  171 SRRRVKTQLLSQRPVAGVGNIYADEALWLAQINPAVRYVSKPRAGRLADAIRTALTSGLRHGGTTLRDYATLDGSSGRNQHHLRCYGRAGEPCERCGTELRRRIIDARGTTWCPTCQRR 289          
BLAST of mRNA_M-pyrifera_M_contig86722.20174.1 vs. uniprot
Match: A0A6N8YHF8_9ACTN (Bifunctional DNA-formamidopyrimidine glycosylase/DNA-(Apurinic or apyrimidinic site) lyase (Fragment) n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N8YHF8_9ACTN)

HSP 1 Score: 167 bits (423), Expect = 5.780e-50
Identity = 81/119 (68.07%), Postives = 91/119 (76.47%), Query Frame = 0
Query:    6 SNRHLKTLLLGQRAVAGVGNIYADEALWMAGINPATRRLGRERADRLVVAVRDALQSGLDHGGTTLRDYVDSTGRTGANQHRLHCYGRSGEPCERCGTVLRRREVDARTTTWCPVCQAR 124
            S R +KT LL QR VAGVGNIYADEALW+A INPA R + + RA RL  A+R AL+SGL HGGTTLRDY    G +G NQH L CYGR+GEPCERCG+ LRRR +DAR TTWCP CQ R
Sbjct:  107 SRRCVKTQLLSQRPVAGVGNIYADEALWLAQINPAARYVSKPRAHRLADAIRVALKSGLRHGGTTLRDYAALDGSSGRNQHHLRCYGRAGEPCERCGSELRRRIIDARGTTWCPACQRR 225          
BLAST of mRNA_M-pyrifera_M_contig86722.20174.1 vs. uniprot
Match: A0A7K2E4M9_9ACTN (Bifunctional DNA-formamidopyrimidine glycosylase/DNA-(Apurinic or apyrimidinic site) lyase n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E4M9_9ACTN)

HSP 1 Score: 169 bits (429), Expect = 6.240e-50
Identity = 82/119 (68.91%), Postives = 89/119 (74.79%), Query Frame = 0
Query:    6 SNRHLKTLLLGQRAVAGVGNIYADEALWMAGINPATRRLGRERADRLVVAVRDALQSGLDHGGTTLRDYVDSTGRTGANQHRLHCYGRSGEPCERCGTVLRRREVDARTTTWCPVCQAR 124
            S R +KT LL QR VAGVGNIYADEALW+A INPA R + R RA RL  A+R AL SGL HGGTTLRDY    G +G NQH L CYGR+GEPCERCG  LRRR +DAR TTWCP CQ R
Sbjct:  184 SRRRVKTQLLSQRPVAGVGNIYADEALWLARINPAVRYVSRPRAGRLADAIRTALTSGLRHGGTTLRDYATLDGSSGRNQHHLRCYGRAGEPCERCGAELRRRIIDARGTTWCPTCQRR 302          
BLAST of mRNA_M-pyrifera_M_contig86722.20174.1 vs. uniprot
Match: A0A6B0ZK81_9ACTN (Bifunctional DNA-formamidopyrimidine glycosylase/DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZK81_9ACTN)

HSP 1 Score: 168 bits (425), Expect = 2.310e-49
Identity = 82/119 (68.91%), Postives = 90/119 (75.63%), Query Frame = 0
Query:    6 SNRHLKTLLLGQRAVAGVGNIYADEALWMAGINPATRRLGRERADRLVVAVRDALQSGLDHGGTTLRDYVDSTGRTGANQHRLHCYGRSGEPCERCGTVLRRREVDARTTTWCPVCQAR 124
            S R +KT LL QR VAGVGNIYADEALW+A INPA R + R RA  L  A+R  L+SGL HGGTTLRDY    G +G NQH L CYGR+GEPCERCGT LRRR +DAR TTWCPVCQ R
Sbjct:  181 SRRCVKTQLLSQRPVAGVGNIYADEALWLAQINPAARYVSRPRAGWLADAIRTVLESGLRHGGTTLRDYAALDGSSGRNQHHLRCYGRAGEPCERCGTELRRRIIDARGTTWCPVCQRR 299          
BLAST of mRNA_M-pyrifera_M_contig86722.20174.1 vs. uniprot
Match: A0A7C7SC76_9ACTN (Bifunctional DNA-formamidopyrimidine glycosylase/DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7C7SC76_9ACTN)

HSP 1 Score: 165 bits (418), Expect = 1.300e-48
Identity = 76/119 (63.87%), Postives = 90/119 (75.63%), Query Frame = 0
Query:    6 SNRHLKTLLLGQRAVAGVGNIYADEALWMAGINPATRRLGRERADRLVVAVRDALQSGLDHGGTTLRDYVDSTGRTGANQHRLHCYGRSGEPCERCGTVLRRREVDARTTTWCPVCQAR 124
            S+R +KT LL QR +AG+GNIYADEALW +GI+P  RRLG ER++RL+V +R  L   LDHGGTTLRDY    G +G NQHRL CYGRSG+PC  CG +L  R +D RTTTWCP CQAR
Sbjct:  155 SSRRVKTKLLSQRPIAGIGNIYADEALWRSGIHPGARRLGPERSERLLVHLRAVLGEALDHGGTTLRDYRTPDGGSGRNQHRLDCYGRSGQPCRSCGDLLTSRSIDQRTTTWCPTCQAR 273          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86722.20174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D6UBN2_9ACTN1.970e-6278.23DNA-formamidopyrimidine glycosylase n=7 Tax=Acidim... [more]
A0A7K1Z8R1_9ACTN4.640e-6171.77Bifunctional DNA-formamidopyrimidine glycosylase/D... [more]
A0A6B1EHR6_9ACTN3.330e-5168.03Bifunctional DNA-formamidopyrimidine glycosylase/D... [more]
UPI001D0F4D3E5.090e-5166.39bifunctional DNA-formamidopyrimidine glycosylase/D... [more]
A0A7X6P2F0_9ACTN1.340e-5065.57Bifunctional DNA-formamidopyrimidine glycosylase/D... [more]
A0A7K2DCI2_9ACTN2.200e-5068.91Bifunctional DNA-formamidopyrimidine glycosylase/D... [more]
A0A6N8YHF8_9ACTN5.780e-5068.07Bifunctional DNA-formamidopyrimidine glycosylase/D... [more]
A0A7K2E4M9_9ACTN6.240e-5068.91Bifunctional DNA-formamidopyrimidine glycosylase/D... [more]
A0A6B0ZK81_9ACTN2.310e-4968.91Bifunctional DNA-formamidopyrimidine glycosylase/D... [more]
A0A7C7SC76_9ACTN1.300e-4863.87Bifunctional DNA-formamidopyrimidine glycosylase/D... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015886DNA glycosylase/AP lyase, H2TH DNA-bindingSMARTSM01232H2TH_2coord: 2..75
e-value: 1.4E-19
score: 81.1
IPR015886DNA glycosylase/AP lyase, H2TH DNA-bindingPFAMPF06831H2THcoord: 3..72
e-value: 4.6E-18
score: 65.0
IPR010663Zinc finger, FPG/IleRS-typePFAMPF06827zf-FPG_IleRScoord: 95..123
e-value: 6.8E-9
score: 35.4
NoneNo IPR availableGENE3D1.10.8.50coord: 1..123
e-value: 5.5E-40
score: 138.4
NoneNo IPR availablePANTHERPTHR42697FAMILY NOT NAMEDcoord: 3..123
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 71..122
IPR015887DNA glycosylase/AP lyase, zinc finger domain, DNA-binding sitePROSITEPS01242ZF_FPG_1coord: 98..122
IPR000214Zinc finger, DNA glycosylase/AP lyase-typePROSITEPS51066ZF_FPG_2coord: 89..123
score: 12.019
IPR010979Ribosomal protein S13-like, H2THSUPERFAMILY46946S13-like H2TH domaincoord: 3..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86722contigM-pyrifera_M_contig86722:469..843 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86722.20174.1mRNA_M-pyrifera_M_contig86722.20174.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86722 469..843 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86722.20174.1 ID=prot_M-pyrifera_M_contig86722.20174.1|Name=mRNA_M-pyrifera_M_contig86722.20174.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
AFVQRSNRHLKTLLLGQRAVAGVGNIYADEALWMAGINPATRRLGRERAD
RLVVAVRDALQSGLDHGGTTLRDYVDSTGRTGANQHRLHCYGRSGEPCER
CGTVLRRREVDARTTTWCPVCQAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015886DNA_glyclase/AP_lyase_DNA-bd
IPR010663Znf_FPG/IleRS
IPR015887DNA_glyclase_Znf_dom_DNA_BS
IPR000214Znf_DNA_glyclase/AP_lyase
IPR010979Ribosomal_S13-like_H2TH