prot_M-pyrifera_M_contig86720.20172.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86720.20172.1
Unique Nameprot_M-pyrifera_M_contig86720.20172.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length108
Homology
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BLAST of mRNA_M-pyrifera_M_contig86720.20172.1 vs. uniprot
Match: A0A482UN69_9ARCH (START domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UN69_9ARCH)

HSP 1 Score: 94.0 bits (232), Expect = 4.020e-21
Identity = 51/107 (47.66%), Postives = 59/107 (55.14%), Query Frame = 0 
Query:    1 ADQVADAITDLELYASWDRSWEQVQPVR-LLDHHNQILRFVADQPPPPVSNILTQRDFVMSRDFRRDPDTGTFVVLFRNVQHRRSPPLPDKIRANTLGVIGFVVRSV 106
            A    DAIT LE Y  WDR+W  VQP+   LD  N    F+AD PPPP S ++  RDFVM R   RDP  G  V + RN  HR  P  P  IR  TL  +GF+V  V
Sbjct:   66 AQDAFDAITRLEKYRRWDRTWHLVQPIGDPLDAFNAAYYFIADSPPPPYSYLIVARDFVMLRFTYRDPYAGINVDVLRNACHRAKPADPVYIRGETLSCVGFMVTPV 172
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86720.20172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A482UN69_9ARCH4.020e-2147.66START domain-containing protein (Fragment) n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002913START domainPFAMPF01852STARTcoord: 2..96
e-value: 4.7E-6
score: 26.1
IPR002913START domainPROSITEPS50848STARTcoord: 1..108
score: 17.767
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 1..108
e-value: 7.3E-17
score: 63.8
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 1..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86720contigM-pyrifera_M_contig86720:9..332 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86720.20172.1mRNA_M-pyrifera_M_contig86720.20172.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86720 9..332 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86720.20172.1 ID=prot_M-pyrifera_M_contig86720.20172.1|Name=mRNA_M-pyrifera_M_contig86720.20172.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp
ADQVADAITDLELYASWDRSWEQVQPVRLLDHHNQILRFVADQPPPPVSN
ILTQRDFVMSRDFRRDPDTGTFVVLFRNVQHRRSPPLPDKIRANTLGVIG
FVVRSVPS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002913START_lipid-bd_dom
IPR023393START-like_dom_sf