prot_M-pyrifera_M_contig8667.20160.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8667.20160.1
Unique Nameprot_M-pyrifera_M_contig8667.20160.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length49
Homology
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BLAST of mRNA_M-pyrifera_M_contig8667.20160.1 vs. uniprot
Match: A0A6H5JH29_9PHAE (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH29_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.570e-13
Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 0 
Query:    1 MTVRILDVKGQIYKLVVRPETTVHELKTRLVEEAGVEIARQRIIYGGKV 49
            MTVR+LDV+GQ Y L V PET+V ELK  LV+ AGVE+ RQRII+GGKV
Sbjct:   83 MTVRVLDVRGQFYPLRVTPETSVRELKLMLVDAAGVEVPRQRIIHGGKV 131
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BLAST of mRNA_M-pyrifera_M_contig8667.20160.1 vs. uniprot
Match: D8LJ71_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ71_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 5.380e-12
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0 
Query:    1 MTVRILDVKGQIYKLVVRPETTVHELKTRLVEEAGVEIARQRIIYGGKV 49
            MTVR+LDV+GQ Y L V PET+V ELK  LV+ AGVE+ RQRII+GGK+
Sbjct:   84 MTVRVLDVRGQFYPLRVTPETSVRELKLMLVDAAGVEVPRQRIIHGGKM 132
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8667.20160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JH29_9PHAE1.570e-1369.39Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
D8LJ71_ECTSI5.380e-1267.35Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 2..49
e-value: 4.7E-8
score: 32.7
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 1..49
score: 12.901
NoneNo IPR availableGENE3D3.10.20.90coord: 1..49
e-value: 5.6E-10
score: 40.7
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8667contigM-pyrifera_M_contig8667:10870..11016 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8667.20160.1mRNA_M-pyrifera_M_contig8667.20160.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8667 10846..11016 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8667.20160.1 ID=prot_M-pyrifera_M_contig8667.20160.1|Name=mRNA_M-pyrifera_M_contig8667.20160.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=49bp
MTVRILDVKGQIYKLVVRPETTVHELKTRLVEEAGVEIARQRIIYGGKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-like_domsf