prot_M-pyrifera_M_contig86184.20087.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86184.20087.1
Unique Nameprot_M-pyrifera_M_contig86184.20087.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length87
Homology
BLAST of mRNA_M-pyrifera_M_contig86184.20087.1 vs. uniprot
Match: I2CPD2_NANGC (U2-associated protein SR140 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPD2_NANGC)

HSP 1 Score: 62.8 bits (151), Expect = 1.440e-9
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 0
Query:   30 DGVELSTNLQIDGLLLATTEQDLFNVFGRFGQVESVKVMVPRTDEERAKGTTRGYVAF 87
            DG   +TNL +  L   TTE+ L  VFGRFG+V SVK+M PR++EERA+G   G+V+F
Sbjct:  188 DGDPHTTNLHVGNLSPLTTEERLEAVFGRFGRVYSVKIMWPRSEEERARGRNTGFVSF 245          
BLAST of mRNA_M-pyrifera_M_contig86184.20087.1 vs. uniprot
Match: F0XVQ8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVQ8_AURAN)

HSP 1 Score: 61.6 bits (148), Expect = 1.510e-9
Identity = 32/71 (45.07%), Postives = 44/71 (61.97%), Query Frame = 0
Query:   17 AAPAPTIEAYKAADGVELSTNLQIDGLLLATTEQDLFNVFGRFGQVESVKVMVPRTDEERAKGTTRGYVAF 87
            AAP P  E      G + +TNL ++ L    TE+ L  VFG FG + SVKVM PR+++ER +G  RG+V+F
Sbjct:   29 AAP-PAYEGRTEGTGYQGTTNLCVNNLAATVTEEKLMQVFGAFGDIFSVKVMWPRSEDERRRGRNRGFVSF 98          
BLAST of mRNA_M-pyrifera_M_contig86184.20087.1 vs. uniprot
Match: A0A6L5D6C5_9INSE (Uncharacterized protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5D6C5_9INSE)

HSP 1 Score: 62.8 bits (151), Expect = 1.550e-9
Identity = 33/70 (47.14%), Postives = 44/70 (62.86%), Query Frame = 0
Query:   18 APAPTIEAYKAADGVELSTNLQIDGLLLATTEQDLFNVFGRFGQVESVKVMVPRTDEERAKGTTRGYVAF 87
            APAPT    K   G   +TNL +  L    TEQ L  VFG++G + S+K+M PR+DEE+A+G   G+VAF
Sbjct:  171 APAPTT---KGESGDPTTTNLYLGNLNPKITEQQLMEVFGKYGPLASIKIMWPRSDEEKARGRNCGFVAF 237          
BLAST of mRNA_M-pyrifera_M_contig86184.20087.1 vs. uniprot
Match: A0A7S4E426_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E426_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.550e-9
Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 0
Query:   30 DGVELSTNLQIDGLLLATTEQDLFNVFGRFGQVESVKVMVPRTDEERAKGTTRGYVAF 87
            DG   +TNL +  +  ATTE  L  +F R+GQ+ESVK+M PRTDEER +G   G+V +
Sbjct:   99 DGDRSTTNLYVGNISPATTEAQLAKIFARYGQLESVKIMWPRTDEERRRGRNCGFVQY 156          
BLAST of mRNA_M-pyrifera_M_contig86184.20087.1 vs. uniprot
Match: W7U2X6_9STRA (U2 snrnp-associated splicing factor putative n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2X6_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.570e-9
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 0
Query:   30 DGVELSTNLQIDGLLLATTEQDLFNVFGRFGQVESVKVMVPRTDEERAKGTTRGYVAF 87
            DG   +TNL +  L   TTE+ L  VFGRFG+V SVK+M PR++EERA+G   G+V+F
Sbjct:  188 DGDPHTTNLHVGNLSPLTTEERLEAVFGRFGRVYSVKIMWPRSEEERARGRNTGFVSF 245          
BLAST of mRNA_M-pyrifera_M_contig86184.20087.1 vs. uniprot
Match: A0A087UBV6_STEMI (U2 snRNP-associated SURP motif-containing protein (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087UBV6_STEMI)

HSP 1 Score: 61.6 bits (148), Expect = 3.980e-9
Identity = 37/80 (46.25%), Postives = 48/80 (60.00%), Query Frame = 0
Query:    8 VESLIQSAGAAPAPTIEAYKAADGVELSTNLQIDGLLLATTEQDLFNVFGRFGQVESVKVMVPRTDEERAKGTTRGYVAF 87
            VE+ I+ A     P+  +Y   D    +TNL +  L    TEQ L  VFGRFG + SVK+M PR+DEERA+G   G+VAF
Sbjct:  175 VETQIRLADDYRYPSYGSYDTGD--PSTTNLYLGNLNPKMTEQQLCEVFGRFGPLASVKIMWPRSDEERARGRNCGFVAF 252          
BLAST of mRNA_M-pyrifera_M_contig86184.20087.1 vs. uniprot
Match: A0A482XPZ8_LAOST (Uncharacterized protein n=2 Tax=Delphacidae TaxID=33362 RepID=A0A482XPZ8_LAOST)

HSP 1 Score: 61.6 bits (148), Expect = 3.980e-9
Identity = 35/87 (40.23%), Postives = 52/87 (59.77%), Query Frame = 0
Query:    1 GAIGGTAVESLIQSAGAAPAPTIEAYKAADGVELSTNLQIDGLLLATTEQDLFNVFGRFGQVESVKVMVPRTDEERAKGTTRGYVAF 87
            GA+ G+  +  I  AG+A    I ++   D    +TNL +  L    TEQ L  VFG++G + S+K+M PR+DEE+A+G   G+VAF
Sbjct:  159 GAVKGSPDDGQIVKAGSAIEDKIGSFDCGDPT--TTNLYLGNLNPKITEQQLMEVFGKYGPLASIKIMWPRSDEEKARGRNCGFVAF 243          
BLAST of mRNA_M-pyrifera_M_contig86184.20087.1 vs. uniprot
Match: UPI00077FB5BB (U2 snRNP-associated SURP motif-containing protein n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI00077FB5BB)

HSP 1 Score: 61.6 bits (148), Expect = 3.980e-9
Identity = 37/80 (46.25%), Postives = 48/80 (60.00%), Query Frame = 0
Query:    8 VESLIQSAGAAPAPTIEAYKAADGVELSTNLQIDGLLLATTEQDLFNVFGRFGQVESVKVMVPRTDEERAKGTTRGYVAF 87
            VE+ I+ A     P+  +Y   D    +TNL +  L    TEQ L  VFGRFG + SVK+M PR+DEERA+G   G+VAF
Sbjct:  174 VETQIRLADDYRYPSYGSYDTGD--PSTTNLYLGNLNPKMTEQQLCEVFGRFGPLASVKIMWPRSDEERARGRNCGFVAF 251          
BLAST of mRNA_M-pyrifera_M_contig86184.20087.1 vs. uniprot
Match: A0A7R9H7B9_TIMPO (Hypothetical protein (Fragment) n=1 Tax=Timema poppense TaxID=170557 RepID=A0A7R9H7B9_TIMPO)

HSP 1 Score: 59.7 bits (143), Expect = 6.540e-9
Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 0
Query:   30 DGVELSTNLQIDGLLLATTEQDLFNVFGRFGQVESVKVMVPRTDEERAKGTTRGYVAF 87
            +G   +TNL +  L    TEQ L  VFGR+G + S+K+M PR+DEE+A+G   G+VAF
Sbjct:   43 NGDPTTTNLYLGNLNPKITEQQLMEVFGRYGPLASIKIMWPRSDEEKARGRNCGFVAF 100          
BLAST of mRNA_M-pyrifera_M_contig86184.20087.1 vs. uniprot
Match: A0A4S2M2L5_OPIFE (Uncharacterized protein n=3 Tax=Opisthorchiidae TaxID=6196 RepID=A0A4S2M2L5_OPIFE)

HSP 1 Score: 60.8 bits (146), Expect = 7.490e-9
Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 0
Query:   30 DGVELSTNLQIDGLLLATTEQDLFNVFGRFGQVESVKVMVPRTDEERAKGTTRGYVAF 87
            DG   +TNL +  L    TEQ L   FGR+G + SVK+M PRTDEER++G   G+VAF
Sbjct:  220 DGDRTTTNLFLGNLNPKMTEQQLCEAFGRYGPLASVKIMWPRTDEERSRGRNCGFVAF 277          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86184.20087.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
I2CPD2_NANGC1.440e-953.45U2-associated protein SR140 (Fragment) n=1 Tax=Nan... [more]
F0XVQ8_AURAN1.510e-945.07Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A6L5D6C5_9INSE1.550e-947.14Uncharacterized protein n=1 Tax=Ephemera danica Ta... [more]
A0A7S4E426_9STRA1.550e-950.00Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
W7U2X6_9STRA1.570e-953.45U2 snrnp-associated splicing factor putative n=4 T... [more]
A0A087UBV6_STEMI3.980e-946.25U2 snRNP-associated SURP motif-containing protein ... [more]
A0A482XPZ8_LAOST3.980e-940.23Uncharacterized protein n=2 Tax=Delphacidae TaxID=... [more]
UPI00077FB5BB3.980e-946.25U2 snRNP-associated SURP motif-containing protein ... [more]
A0A7R9H7B9_TIMPO6.540e-948.28Hypothetical protein (Fragment) n=1 Tax=Timema pop... [more]
A0A4S2M2L5_OPIFE7.490e-951.72Uncharacterized protein n=3 Tax=Opisthorchiidae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 41..79
e-value: 5.2E-5
score: 23.0
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 36..87
score: 9.269
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 35..87
e-value: 2.2E-8
score: 36.2
NoneNo IPR availablePANTHERPTHR23140RNA PROCESSING PROTEIN LD23810Pcoord: 30..87
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 21..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86184contigM-pyrifera_M_contig86184:1..261 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86184.20087.1mRNA_M-pyrifera_M_contig86184.20087.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86184 1..261 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86184.20087.1 ID=prot_M-pyrifera_M_contig86184.20087.1|Name=mRNA_M-pyrifera_M_contig86184.20087.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=87bp
GAIGGTAVESLIQSAGAAPAPTIEAYKAADGVELSTNLQIDGLLLATTEQ
DLFNVFGRFGQVESVKVMVPRTDEERAKGTTRGYVAF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf