prot_M-pyrifera_M_contig86170.20083.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86170.20083.1
Unique Nameprot_M-pyrifera_M_contig86170.20083.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length155
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig86170.20083.1 vs. uniprot
Match: A0A7C8ZY55_OPUST (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZY55_OPUST)

HSP 1 Score: 171 bits (434), Expect = 5.540e-51
Identity = 77/152 (50.66%), Postives = 104/152 (68.42%), Query Frame = 0 
Query:    1 DHRWCLTGTPLHNGIGDIHTLLRFLQHDPWADQAWWRKMVSDPFDQGDPSAMPLLQAILHPILLRRTKAMAGEDGKPIVALPPRRVRTKVISMDPLESRFYRALFRHSKREFDGLVAQGRLSHSYTVILTLLLRLRQACDHPRLALGVGKTE 152
            D RWCLTGTP+ N + DI++LLRFL+ +PW + AWW K++  PF++GD   + L+Q+IL PI+LRRTK     +G+PI+ LPP  V+     +   E  FY ALF+ SK +FD  VA+GR+ H+Y  IL LLLRLRQ CDHP L +  G T+
Sbjct:   37 DCRWCLTGTPIQNNLEDIYSLLRFLKVEPWGNWAWWNKLIQKPFEEGDERGLKLVQSILRPIMLRRTKHSVDREGRPILVLPPANVQVIYCELTEAERDFYEALFKKSKVKFDKFVAEGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQ 188
[Close]
BLAST of mRNA_M-pyrifera_M_contig86170.20083.1 vs. uniprot
Match: UPI001FB06E7A (DNA repair protein RAD5A isoform X1 n=4 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB06E7A)

HSP 1 Score: 178 bits (451), Expect = 6.950e-49
Identity = 81/152 (53.29%), Postives = 105/152 (69.08%), Query Frame = 0 
Query:    1 DHRWCLTGTPLHNGIGDIHTLLRFLQHDPWADQAWWRKMVSDPFDQGDPSAMPLLQAILHPILLRRTKAMAGEDGKPIVALPPRRVRTKVISMDPLESRFYRALFRHSKREFDGLVAQGRLSHSYTVILTLLLRLRQACDHPRLALGVGKTE 152
            D RWCLTGTP+ N + DI++LLRFL+ +PW + AWW K+V  PFD+GD   + L+Q+IL PI+LRRTK+    DG+PI+ LPP  V+T    +   E  FY ALF+ SK +FD  V QGR+ H+Y  IL LLLRLRQ CDHP L +  G T+
Sbjct:  585 DRRWCLTGTPIQNNLEDIYSLLRFLRIEPWGNWAWWNKLVQKPFDEGDERGLKLVQSILKPIMLRRTKSSTDRDGRPILVLPPADVQTIYCELTEAEKDFYEALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQ 736
[Close]
BLAST of mRNA_M-pyrifera_M_contig86170.20083.1 vs. uniprot
Match: A0A5A8D5B7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D5B7_CAFRO)

HSP 1 Score: 176 bits (446), Expect = 1.790e-48
Identity = 76/146 (52.05%), Postives = 104/146 (71.23%), Query Frame = 0 
Query:    2 HRWCLTGTPLHNGIGDIHTLLRFLQHDPWADQAWWRKMVSDPFDQGDPSAMPLLQAILHPILLRRTKAMAGEDGKPIVALPPRRVRTKVISMDPLESRFYRALFRHSKREFDGLVAQGRLSHSYTVILTLLLRLRQACDHPRLALG 147
            HRW LTGTP+ N + D+H+L+RF++H PW + AWWR++++ PF+ GDP A+P LQA+L P+LLRRTK M   DG+PIV LPP+      +++   E  FY A++  SK  F+G  A G + + Y VIL+LL+RLRQACDHP L LG
Sbjct:  258 HRWALTGTPVQNSLKDLHSLVRFMRHQPWDEPAWWRRVIAQPFEAGDPRALPTLQALLRPLLLRRTKGMRDVDGRPIVVLPPKSEELVWLALSESERAFYDAIYSRSKATFEGFEAAGTVLNQYAVILSLLVRLRQACDHPFLVLG 403
[Close]
BLAST of mRNA_M-pyrifera_M_contig86170.20083.1 vs. uniprot
Match: A0A5A8CW93_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CW93_CAFRO)

HSP 1 Score: 176 bits (446), Expect = 2.170e-48
Identity = 76/146 (52.05%), Postives = 104/146 (71.23%), Query Frame = 0 
Query:    2 HRWCLTGTPLHNGIGDIHTLLRFLQHDPWADQAWWRKMVSDPFDQGDPSAMPLLQAILHPILLRRTKAMAGEDGKPIVALPPRRVRTKVISMDPLESRFYRALFRHSKREFDGLVAQGRLSHSYTVILTLLLRLRQACDHPRLALG 147
            HRW LTGTP+ N + D+H+L+RF++H PW + AWWR++++ PF+ GDP A+P LQA+L P+LLRRTK M   DG+PIV LPP+      +++   E  FY A++  SK  F+G  A G + + Y VIL+LL+RLRQACDHP L LG
Sbjct:   89 HRWALTGTPVQNSLKDLHSLVRFMRHQPWDEPAWWRRVIAQPFEAGDPRALPTLQALLRPLLLRRTKGMRDVDGRPIVVLPPKSEELVWLALSESERAFYDAIYSRSKATFEGFEAAGTVLNQYAVILSLLVRLRQACDHPFLVLG 234
[Close]
BLAST of mRNA_M-pyrifera_M_contig86170.20083.1 vs. uniprot
Match: A0A5A8CAC5_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CAC5_CAFRO)

HSP 1 Score: 176 bits (446), Expect = 3.400e-48
Identity = 76/146 (52.05%), Postives = 104/146 (71.23%), Query Frame = 0 
Query:    2 HRWCLTGTPLHNGIGDIHTLLRFLQHDPWADQAWWRKMVSDPFDQGDPSAMPLLQAILHPILLRRTKAMAGEDGKPIVALPPRRVRTKVISMDPLESRFYRALFRHSKREFDGLVAQGRLSHSYTVILTLLLRLRQACDHPRLALG 147
            HRW LTGTP+ N + D+H+L+RF++H PW + AWWR++++ PF+ GDP A+P LQA+L P+LLRRTK M   DG+PIV LPP+      +++   E  FY A++  SK  F+G  A G + + Y VIL+LL+RLRQACDHP L LG
Sbjct:  292 HRWALTGTPVQNSLKDLHSLVRFMRHQPWDEPAWWRRVIAQPFEAGDPRALPTLQALLRPLLLRRTKGMRDVDGRPIVVLPPKSEELVWLALSESERAFYDAIYSRSKATFEGFEAAGTVLNQYAVILSLLVRLRQACDHPFLVLG 437
[Close]
BLAST of mRNA_M-pyrifera_M_contig86170.20083.1 vs. uniprot
Match: UPI0012630830 (DNA repair protein RAD5A isoform X1 n=3 Tax=Pistacia vera TaxID=55513 RepID=UPI0012630830)

HSP 1 Score: 175 bits (443), Expect = 8.500e-48
Identity = 78/152 (51.32%), Postives = 105/152 (69.08%), Query Frame = 0 
Query:    1 DHRWCLTGTPLHNGIGDIHTLLRFLQHDPWADQAWWRKMVSDPFDQGDPSAMPLLQAILHPILLRRTKAMAGEDGKPIVALPPRRVRTKVISMDPLESRFYRALFRHSKREFDGLVAQGRLSHSYTVILTLLLRLRQACDHPRLALGVGKTE 152
            D RWCLTGTP+ N +GDI++LLRFL+ +PW   AWW K+V  PF++GD   + L+Q+IL PI+LRRTK+    +G+PI+ LPP  ++     +  +E  FY ALF+ SK +FD  V QGR+ H+Y  IL LLLRLRQ CDHP L +  G T+
Sbjct:  599 DCRWCLTGTPIQNNLGDIYSLLRFLRVEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRTKSSTDREGRPILVLPPADIQVIYCELTDVEKDFYEALFKRSKVKFDKFVEQGRVLHNYASILELLLRLRQCCDHPYLVMSRGDTQ 750
[Close]
BLAST of mRNA_M-pyrifera_M_contig86170.20083.1 vs. uniprot
Match: A0A6J0PEI4_ELAGV (DNA repair protein RAD5A isoform X3 n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6J0PEI4_ELAGV)

HSP 1 Score: 174 bits (440), Expect = 9.420e-48
Identity = 79/152 (51.97%), Postives = 102/152 (67.11%), Query Frame = 0 
Query:    1 DHRWCLTGTPLHNGIGDIHTLLRFLQHDPWADQAWWRKMVSDPFDQGDPSAMPLLQAILHPILLRRTKAMAGEDGKPIVALPPRRVRTKVISMDPLESRFYRALFRHSKREFDGLVAQGRLSHSYTVILTLLLRLRQACDHPRLALGVGKTE 152
            D RWCLTGTP+ N + DI++LLRFL+ +PWAD   W K++  P+++GD   + L+Q+IL PI+LRRTK+    DG+PI+ LPP  V      M   E  FY ALFR SK +FD  V QGR+ H+Y  IL LLLRLRQ CDHP L +  G T+
Sbjct:  328 DRRWCLTGTPIQNNLEDIYSLLRFLKVEPWADWGLWHKLIQKPYEEGDERGLKLVQSILKPIMLRRTKSSTDRDGRPILVLPPANVEVHYCEMSAAEKDFYEALFRRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQ 479
[Close]
BLAST of mRNA_M-pyrifera_M_contig86170.20083.1 vs. uniprot
Match: UPI00053FB0FE (putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FB0FE)

HSP 1 Score: 174 bits (442), Expect = 1.160e-47
Identity = 77/152 (50.66%), Postives = 104/152 (68.42%), Query Frame = 0 
Query:    1 DHRWCLTGTPLHNGIGDIHTLLRFLQHDPWADQAWWRKMVSDPFDQGDPSAMPLLQAILHPILLRRTKAMAGEDGKPIVALPPRRVRTKVISMDPLESRFYRALFRHSKREFDGLVAQGRLSHSYTVILTLLLRLRQACDHPRLALGVGKTE 152
            D+RWCLTGTP+ N + DI++LLRFL+ +PW + AWW K+V  PF++GD   + L+Q+IL PI+LRRTK     +G+PI+ LPP  ++     +   E  FY ALF+ SK +FD  V QGR+ H+Y  IL LLLRLRQ CDHP L +  G T+
Sbjct:  597 DYRWCLTGTPIQNNLTDIYSLLRFLKVEPWGNWAWWNKLVQKPFEEGDERGLKLVQSILRPIMLRRTKCSVDREGRPILVLPPANIQVVYCELSEAEKDFYEALFKKSKVKFDRFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQ 748
[Close]
BLAST of mRNA_M-pyrifera_M_contig86170.20083.1 vs. uniprot
Match: UPI0010A469F5 (DNA repair protein RAD5A n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A469F5)

HSP 1 Score: 174 bits (442), Expect = 1.170e-47
Identity = 79/152 (51.97%), Postives = 102/152 (67.11%), Query Frame = 0 
Query:    1 DHRWCLTGTPLHNGIGDIHTLLRFLQHDPWADQAWWRKMVSDPFDQGDPSAMPLLQAILHPILLRRTKAMAGEDGKPIVALPPRRVRTKVISMDPLESRFYRALFRHSKREFDGLVAQGRLSHSYTVILTLLLRLRQACDHPRLALGVGKTE 152
            D RWCLTGTP+ N + D+++LLRFL+ +PW   AWW K+V  PF++GD   + L+Q+IL PI+LRRTK     DGKPI+ LPP  V+     +   E  FY ALF+ SK +FD  V QGR+ H+Y  IL LLLRLRQ CDHP L +  G T+
Sbjct:  613 DRRWCLTGTPIQNNLEDVYSLLRFLRIEPWGHWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRTKHSMDRDGKPIIVLPPAEVQIIYCELTEAEKDFYEALFKRSKVKFDQFVEQGRILHNYASILELLLRLRQCCDHPFLVMSRGDTQ 764
[Close]
BLAST of mRNA_M-pyrifera_M_contig86170.20083.1 vs. uniprot
Match: A0A6I9QMJ6_ELAGV (DNA repair protein RAD5A isoform X1 n=3 Tax=Cocoseae TaxID=169705 RepID=A0A6I9QMJ6_ELAGV)

HSP 1 Score: 174 bits (440), Expect = 2.160e-47
Identity = 79/152 (51.97%), Postives = 102/152 (67.11%), Query Frame = 0 
Query:    1 DHRWCLTGTPLHNGIGDIHTLLRFLQHDPWADQAWWRKMVSDPFDQGDPSAMPLLQAILHPILLRRTKAMAGEDGKPIVALPPRRVRTKVISMDPLESRFYRALFRHSKREFDGLVAQGRLSHSYTVILTLLLRLRQACDHPRLALGVGKTE 152
            D RWCLTGTP+ N + DI++LLRFL+ +PWAD   W K++  P+++GD   + L+Q+IL PI+LRRTK+    DG+PI+ LPP  V      M   E  FY ALFR SK +FD  V QGR+ H+Y  IL LLLRLRQ CDHP L +  G T+
Sbjct:  597 DRRWCLTGTPIQNNLEDIYSLLRFLKVEPWADWGLWHKLIQKPYEEGDERGLKLVQSILKPIMLRRTKSSTDRDGRPILVLPPANVEVHYCEMSAAEKDFYEALFRRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQ 748
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86170.20083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C8ZY55_OPUST5.540e-5150.66Helicase ATP-binding domain-containing protein (Fr... [more]
UPI001FB06E7A6.950e-4953.29DNA repair protein RAD5A isoform X1 n=4 Tax=Impati... [more]
A0A5A8D5B7_CAFRO1.790e-4852.05Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8CW93_CAFRO2.170e-4852.05Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8CAC5_CAFRO3.400e-4852.05Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
UPI00126308308.500e-4851.32DNA repair protein RAD5A isoform X1 n=3 Tax=Pistac... [more]
A0A6J0PEI4_ELAGV9.420e-4851.97DNA repair protein RAD5A isoform X3 n=1 Tax=Elaeis... [more]
UPI00053FB0FE1.160e-4750.66putative SWI/SNF-related matrix-associated actin-d... [more]
UPI0010A469F51.170e-4751.97DNA repair protein RAD5A n=1 Tax=Prosopis alba Tax... [more]
A0A6I9QMJ6_ELAGV2.160e-4751.97DNA repair protein RAD5A isoform X1 n=3 Tax=Cocose... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 81..93
e-value: 2.7E-5
score: 25.7
NoneNo IPR availableGENE3D1.20.120.850coord: 94..147
e-value: 2.7E-5
score: 25.7
NoneNo IPR availablePANTHERPTHR45626FAMILY NOT NAMEDcoord: 1..146
NoneNo IPR availablePANTHERPTHR45626:SF22DNA REPAIR PROTEIN RAD5coord: 1..146
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..67
e-value: 3.0E-14
score: 54.6
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 1..144
e-value: 4.0E-26
score: 91.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 77..144
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86170contigM-pyrifera_M_contig86170:5..469 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86170.20083.1mRNA_M-pyrifera_M_contig86170.20083.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86170 5..469 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86170.20083.1 ID=prot_M-pyrifera_M_contig86170.20083.1|Name=mRNA_M-pyrifera_M_contig86170.20083.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp
DHRWCLTGTPLHNGIGDIHTLLRFLQHDPWADQAWWRKMVSDPFDQGDPS
AMPLLQAILHPILLRRTKAMAGEDGKPIVALPPRRVRTKVISMDPLESRF
YRALFRHSKREFDGLVAQGRLSHSYTVILTLLLRLRQACDHPRLALGVGK
TERDA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038718SNF2-like_sf
IPR000330SNF2_N
IPR027417P-loop_NTPase