prot_M-pyrifera_M_contig86048.20054.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86048.20054.1
Unique Nameprot_M-pyrifera_M_contig86048.20054.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length280
Homology
BLAST of mRNA_M-pyrifera_M_contig86048.20054.1 vs. uniprot
Match: A0A7T0FYP0_9BACT (Histidine kinase n=1 Tax=Candidatus Nitronauta litoralis TaxID=2705533 RepID=A0A7T0FYP0_9BACT)

HSP 1 Score: 112 bits (281), Expect = 2.710e-24
Identity = 87/298 (29.19%), Postives = 142/298 (47.65%), Query Frame = 0
Query:    1 YAFDSEARFLSPSRFEDRLVEQGVL--DGSSVLALDVSVPGAG-VDA----------PLTQMAQSAVAGGRGVDAEGYTGYLGNTVVGAWEWNANLGFGIATEQSAEEAYTVLDGSHSIMDVLASIALLLIGGLFFLFSRFRRRLTASQAV--VGEVADRLGTVVDQTSDGIIVTDEAGSILLFNKAATALFGYQPDEVLGRSVDLLVPPDFRTGHEARVSGFVGGATAQQRLMAPD----RSHVLALRSDTSVFPAAITLTSVSLSDGNRVAIAAIRDQTSELAYQDRLVRSNRDLE 279
            Y F  + + L+ SRFE  L++ G+L     ++L +D+  PG   VD           PLTQMA SA+    G + EGY  Y G  VVG W W++ LG G+ TE   +EA+     +  +  V+ ++AL+L+  L F  ++ R R  A Q    + E  +++  V+D   D I+  D  GSI  FN AA  +FGY+ +EV+G    +L+       H+   S               D    R  +  +R+D S+FP  +  + V+  +   + I  +RD +  +  +  +  +  +LE
Sbjct:  254 YGFGGDGKLLTESRFEQHLIQTGLLRPGQGAILNVDIRDPGGSLVDGFRPTVSREKQPLTQMAVSALDHESGANMEGYRDYRGTPVVGVWLWDSELGLGLTTEMDVDEAFESFRSTRFL--VVNTLALILVFFLAFSVAQTRGRTRALQLAHQIRERENQITAVLDNVVDAILTIDSEGSIESFNNAAERIFGYKDNEVIGSQFKILI------AHQDDNSEIESDEEPSDSFTDFDALSTRKELSGIRADGSIFPMELNYSQVAF-ENRSLTIVIVRDISERIRAEKEIQDAKDELE 542          
BLAST of mRNA_M-pyrifera_M_contig86048.20054.1 vs. uniprot
Match: L0H338_9GAMM (Histidine kinase n=1 Tax=Thioflavicoccus mobilis 8321 TaxID=765912 RepID=L0H338_9GAMM)

HSP 1 Score: 110 bits (274), Expect = 2.280e-23
Identity = 90/293 (30.72%), Postives = 134/293 (45.73%), Query Frame = 0
Query:    1 YAFDSEARFLSPSRFEDRLVEQGVL-DGSSVLALDVSVPGA----------------GVDAPLTQMAQSAVAGGRGVDAEGYTGYLGNTVVGAWEWNANLGFGIATEQSAEEAYTVLDGSHSIMDVLASIALLLIGGLFFLFSRFRRRLTASQAVVGEVADRLGTVVDQTSDGIIVTDEAGSILLFNKAATALFGYQPDEVLGRSVDLLVPPDFRTGHEARVSGFVGGATAQQRLMAPDRSHVLALRSDTSVFPAAITLTSVSLSDGNRVAIAAIRDQTSELAYQDRLVRSNR 276
            YAFD   R L      D L   G L +G S   +    PGA                   +P T+MA +A AG  G+D  GY G  G  VVGAW WN  LG G+A EQ   EAY V     +++ +  +                RRRL A+++       RL  +V+   DG+I+ D  G I   N A   +FGY  +++LG+SV++L+P   R+ H+  +  ++   T   +++  +R   LA R+D S FP  +++  + L  G   A   IRD +     ++RL    R
Sbjct:  236 YAFDRNGRLLIDGHAGDDLHHAGRLGNGHSAGHVHRIDPGAKPKAPPRQASGEPAPTAAPSPPTRMAANAAAGRSGIDIAGYRGSRGTPVVGAWTWNEALGIGLAIEQERTEAYGVFVLVRTLVYIAGAAXXXXXXXXXXXXXXXRRRLRAAES-------RLAAIVETAIDGMILIDARGRIENVNPALGQIFGYSAEQLLGQSVNMLMPEPHRSRHDDYIQRYL--ETGITQIIGTNR-ETLAQRADGSRFPIELSVNRLDLDSGPHFA-GVIRDISQRRLAEERLAAEQR 517          
BLAST of mRNA_M-pyrifera_M_contig86048.20054.1 vs. uniprot
Match: UPI001C65A35E (transporter substrate-binding domain-containing protein n=1 Tax=Shewanella sp. FJAT-51860 TaxID=2864212 RepID=UPI001C65A35E)

HSP 1 Score: 105 bits (262), Expect = 9.150e-22
Identity = 86/300 (28.67%), Postives = 138/300 (46.00%), Query Frame = 0
Query:    1 YAFDSEARFLSPSRFEDRLVEQGVLDGSSVLALDVSVPGAGV---------DAPLTQMAQSAVAGGRGVDAEGYTGYLGNTVVGAWEWNANLGFGIATEQSAEEAYTVLDGSHSIMDVLASIALLLIGGLF----FLFSRFRRRL--------TASQAVVGEVA---DRLGTVVDQTSDGIIVTDEAGSILLFNKAATALFGYQPDEVLGRSVDLLVPPDFRTGHEARVSGFVGGA--TAQQRLMAPDRSHVLALRSDTSVFPAAITLTSVSLSDGNRVAIAAIRDQTSELAYQDRLVRS 274
            Y  +     LS SRF D L ++G++    + +L+  +   G          D  L Q  Q  ++G  GV  EG  GY+G  V+ AW W++  GFGI T+ + +E+    + S + M  + ++ L L   L     +L  R  R L        T  +A   E+    D+   +++   D ++VTD  G+I++ N  A  LFGY   +++G S+D LVP       EAR+     GA   ++  L    R   LAL S   V P  I+++ ++   G  +A  ++RD T   A +  L  S
Sbjct:  915 YIVNESGSLLSESRFIDTLRDKGMISKYDISSLNFRLDKVGTAGQEDNLSADKTLIQTVQEVISGSSGVQIEGTPGYIGTDVLSAWVWDSEYGFGIITDMTEDESLESYNISRNTMYSVLAVTLFLSFSLMATNAWLSRRANRSLIRARDELETKVEARTEELRKSKDQFSNLLESAPDPMVVTDTEGNIIMLNARAQGLFGYSSAQLIGESIDKLVP------EEARIHYHYDGADQVSEGGLQGERRIESLALTSQHQVIPVEISISPIASEKGTLIA-TSLRDITDRRAAEKALSES 1207          
BLAST of mRNA_M-pyrifera_M_contig86048.20054.1 vs. uniprot
Match: A0A418YFU2_9GAMM (Histidine kinase n=1 Tax=Motilimonas pumila TaxID=2303987 RepID=A0A418YFU2_9GAMM)

HSP 1 Score: 100 bits (250), Expect = 3.410e-20
Identity = 77/226 (34.07%), Postives = 109/226 (48.23%), Query Frame = 0
Query:    1 YAFDSEARFLSPSRFEDRLVEQGVLDGSSVLALDVSVPGAGVDA-------------PLTQMAQSAVAGGRGVDAEGYTGYLGNTVVGAWEWNANLGFGIATEQSAEEAYTVL-DGSHSIMDVLASIALLLIGGLFFLFS---RFRRRLTASQAVVGEVAD-----------RLGTVVDQTSDGIIVTDEAGSILLFNKAATALFGYQPDEVLGRSVDLLVPPDFR 198
            YA D     LS  RFE  L + G+L      +L+V +   GV+              PLT+MAQS V    G D  GY  Y G  VVG+W W+  LG G+A E    E+  +L    ++I  VL    LL  G  FF  S   R  R L+ S A +  +             R+ T++D  SDGIIVTD+ G+I  F+ AA  +FGY  ++++G ++  L+   F+
Sbjct:  698 YAIDQSGLLLSNVRFEHHLRDIGLLPVDRRASLNVRIADPGVNLLEQPEHSTPDPNWPLTRMAQSIVNKISGSDMSGYRDYRGVEVVGSWLWDDVLGVGLAAEVDVAESMALLVTFKYAIWSVLFISLLLFFGSTFFTLSVGTRATRALSRSHAELEVLVKDRTQKLNINMKRIRTIIDNASDGIIVTDKNGTIQEFSPAAELIFGYPSEDIVGENISKLMNEPFQ 923          
BLAST of mRNA_M-pyrifera_M_contig86048.20054.1 vs. uniprot
Match: I3Y8B1_THIV6 (Histidine kinase n=3 Tax=Thiocystis TaxID=13724 RepID=I3Y8B1_THIV6)

HSP 1 Score: 98.6 bits (244), Expect = 2.100e-19
Identity = 79/217 (36.41%), Postives = 103/217 (47.47%), Query Frame = 0
Query:    1 YAFDSEARFLSPSRFEDRLVEQGVL--DGSSVLALDVSVPGAGV-----------DAPLTQMAQSAVAGGRGVDAEGYTGYLGNTVVGAWEWNANLGFGIATEQSAEEAYTVLDGSHS-IMDVLASIALLLIGG---LFFLFSRFRRRLTASQAVVGEVADRLGTVVDQTSDGIIVTDEAGSILLFNKAATALFGYQPDEVLGRSVDLL----VPPD 196
            YAFD +AR L+PSRF D L        D +S+L L    PG  +             PLT+MA  A++G  GVD +GY  Y G  V+GAW W+A LG G+ATE    EA          ++  L  IALL +G    L +L  R R RL            +L   V+Q    I++TD  G I   N   T L GY  DE +G++  LL     PP+
Sbjct:  554 YAFDRDARLLTPSRFADALAPVAAYYRDETSLLGLRARDPGGDLLQGYRPPALRAQWPLTRMAHVALSGRDGVDTDGYRDYRGVEVIGAWTWSAPLGIGLATEIDLTEALAHYRTMRLLVLGSLFGIALLALGLTALLIWLGERTRARLEVLVEARTNELRKLAQAVEQNPLCIVITDVEGRIEHVNPMFTTLTGYTADEAIGQNPRLLKSGLTPPE 770          
BLAST of mRNA_M-pyrifera_M_contig86048.20054.1 vs. uniprot
Match: UPI001908AAF7 (PAS domain S-box protein n=1 Tax=Thiocystis violacea TaxID=13725 RepID=UPI001908AAF7)

HSP 1 Score: 98.2 bits (243), Expect = 2.910e-19
Identity = 77/217 (35.48%), Postives = 104/217 (47.93%), Query Frame = 0
Query:    1 YAFDSEARFLSPSRFEDRLVEQGVL--DGSSVLALDVSVPGAGV-----------DAPLTQMAQSAVAGGRGVDAEGYTGYLGNTVVGAWEWNANLGFGIATEQSAEEAYTVLDGSHS-IMDVLASIALLLIGG---LFFLFSRFRRRLTASQAVVGEVADRLGTVVDQTSDGIIVTDEAGSILLFNKAATALFGYQPDEVLGRSVDLL----VPPD 196
            YAFD EAR L+PSRF D L     L    +++L      PG  +             PLT+MA  A +G  G+D +GY  Y G  V+GAW W+  LG G+ATE    EA        S ++  L  IALL +G    + +L  R R RL            R+   V+Q    I++TD  G I   N   T + GY+PDEV+G++  LL     PP+
Sbjct:  562 YAFDQEARLLTPSRFADALAPFPELYRGETTLLGRRARDPGGNLLEGYRPRTERAQWPLTRMAGEASSGRGGLDTQGYRDYRGVPVLGAWRWSERLGIGVATEIDLAEALAPYHAMRSLVLGSLLGIALLALGLTALIVWLGERTRGRLQVLVEARTSELRRIAQAVEQNPLCILITDADGRIEHVNPTFTKVTGYEPDEVIGQTPRLLKGDQTPPE 778          
BLAST of mRNA_M-pyrifera_M_contig86048.20054.1 vs. uniprot
Match: A0A8J7PLD0_9BACT (PAS domain S-box protein n=1 Tax=Zavarzinella sp. TaxID=1914240 RepID=A0A8J7PLD0_9BACT)

HSP 1 Score: 96.3 bits (238), Expect = 5.330e-19
Identity = 58/146 (39.73%), Postives = 85/146 (58.22%), Query Frame = 0
Query:  134 ASQAVVGEVADRLGTVVDQTSDGIIVTDEAGSILLFNKAATALFGYQPDEVLGRSVDLLVPPDFRTGHEARVSGFVGGATAQQRLMAPDRSHVLALRSDTSVFPAAITLTSVSLSDGNRVAIAAIRDQTSELAYQDRLVRSNRDLE 279
            AS AV G   DRL  ++D   DGI+  +    I+LFN+ A  +FGY P+E+LGR ++ L+PP +R  H A+V  F  G     R+M  +R  V   R D + FPA +T++ +  S G  +  A +RD T+   Y+D LV+ N+DLE
Sbjct:   14 ASSAVPG---DRLADILDIAEDGILTVNLRREIVLFNRGAAKIFGYAPEEILGRPLEDLLPPAYRPAHPAQVESFARGPVVS-RIMG-ERRVVAGRRKDGTEFPAEVTISKLE-SGGEPLLTAIVRDGTARKKYEDALVKLNQDLE 153          
BLAST of mRNA_M-pyrifera_M_contig86048.20054.1 vs. uniprot
Match: UPI001ADDB7F1 (response regulator n=1 Tax=Marinobacterium alkalitolerans TaxID=1542925 RepID=UPI001ADDB7F1)

HSP 1 Score: 96.7 bits (239), Expect = 9.320e-19
Identity = 87/305 (28.52%), Postives = 146/305 (47.87%), Query Frame = 0
Query:    1 YAFDSEARFLSPSRFEDRLVEQGVL-DG-SSVLALDVSVPGAGVDAP-----------LTQMAQSAVAGGRGVDAEGYTGYLGNTVVGAWEWNANLGFGIATEQSAEEA---YTVLDGS-HSIMDVLASIALLLIGGLFFLFSRFRRRLTASQ-----------AVVGEVADRLGTVVDQTSDGIIVTDEAGSILLFNKAATALFGYQPDEVLGRSVDLLVPPDFRTGHEARVSGFVGGATAQQRLMAPDRSHVLALRSDT---SVFPAAITLTSVSLSDGNRVAIAAIRDQTSELAYQDRLVRS 274
            YA +++   +S +RF   L   G+L DG SS+L L ++ P   VD             LT++ Q+   GG G+   G   Y G  V+ AW W+A+LG G+ TE    EA   Y V   + +S++ V   + + L+    ++  R  R L  S+             + +  ++   +++   D +IVT E+G IL+ N+ A  LFGY+ +E++G+ V++L+P + R  H      F G + A      P       L+++T   ++ P  I+L+ +   DG  V IA +RD T     +  L R+
Sbjct:  520 YALNAQGYMISETRFGKALERAGLLEDGQSSILNLRLANPAFLVDGESGYSGRQESVVLTRVGQALATGGTGMLLSGSESYRGVPVLSAWRWDADLGLGLITEMDEAEALAGYRVSRNTLYSVVGVTLFLTIWLMAFSAWIGDRANRALARSRDELESKVEARTCELKKSREQFHALMESAPDAMIVTSESGEILMINREAERLFGYERNEMIGQPVEMLLPSEVRYKHVIHRHKFSGESRASPSGQTP------VLKAETKNGTLVPVEISLSPIETDDGLVVDIA-LRDVTKRHKAEMELARA 817          
BLAST of mRNA_M-pyrifera_M_contig86048.20054.1 vs. uniprot
Match: A0A3C0QCY7_9GAMM (Histidine kinase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0QCY7_9GAMM)

HSP 1 Score: 94.7 bits (234), Expect = 4.050e-18
Identity = 74/212 (34.91%), Postives = 103/212 (48.58%), Query Frame = 0
Query:    1 YAFDSEARFLSPSRFEDRLVEQGVLD----GSSVLA-----------LDVSVPGAG-VDAPLTQMAQSAVAGGRGVDAEGYTGYLGNTVVGAWEWNANLGFGIATEQSAEEAYTVLDGSHSI----MDVLASIALLLIGGLFFLFSRFRRRLTASQAVVGEVADRLGTVVDQTSDGIIVTDEAGSILLFNKAATALFGYQPDEVLGRSVDLL 192
            YA D   R L+ SRFE  L++ G++     G + L            L   VPG+G  + PLT MA  A  G  G+D  GY  Y G  V+GAW W+  LG G+ TE  A+EA        ++    + V A +AL L G   +L  R + RL            +L   V+Q+   +++TD  G+I   N A T + GYQ DEVLG++  LL
Sbjct:  547 YAIDKNGRLLTVSRFEQSLLDAGIVTTTGTGDTSLQSFRIADPGGNLLSGHVPGSGRPEWPLTLMASEATHGRSGMDVAGYRDYRGVPVLGAWLWSRELGVGLTTEIDADEALAPYLALRNLVIGALGVTALLALALTGLSVWLGDRAKARLERLVEERTRELKKLVQAVEQSPLSVVITDVDGNIEHVNPAFTRITGYQSDEVLGKNPRLL 758          
BLAST of mRNA_M-pyrifera_M_contig86048.20054.1 vs. uniprot
Match: UPI0013D878F4 (PAS domain S-box protein n=1 Tax=Desulfopila sp. IMCC35008 TaxID=2653858 RepID=UPI0013D878F4)

HSP 1 Score: 94.7 bits (234), Expect = 4.350e-18
Identity = 62/211 (29.38%), Postives = 112/211 (53.08%), Query Frame = 0
Query:    1 YAFDSEARFLSPSRFEDRLVEQGVLDG-SSVLALDVSVPGAGV-----------DAPLTQMAQSAVAGGRGVDAEGYTGYLGNTVVGAWEWNANLGFGIATEQSAEEAYTVLDGSHSIMDVLASIALLLIGGLFFLFSRFRRRLTASQAVVGEVADRLGTVVDQTSDGIIVTDEAGSILLFNKAATALFGYQPDEVLGRSVDLLVPPDFRT 199
            Y F+  A  L+  R++ ++VE G++D  +S+L + +  PG  +           +  LT++A++AVA   G+D  GY  +LG  VVG+WEW+    FG+  E +  EAY+    + +I+ ++A+I  +L   LF    + +  L  S+ ++    ++   V +  +D +++ D    I  +N +ATA+FGY   +VL R +  LV  +  T
Sbjct:  240 YLFNKRAYLLTSGRYDQQMVETGLIDTEASLLNVRLLDPGGDLTSGYQPNRPREEMELTRLAKAAVAEKSGLDVAGYRNFLGVRVVGSWEWDNEYHFGLGYEINVSEAYSPYRTTQAIIILVAAIISILSMFLFLNAIKKQHALARSREILAASEEKFRKVSEAIADAVVLLDPQQRIRFWNSSATAIFGYPEQDVLQRKLLPLVTSEATT 450          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86048.20054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7T0FYP0_9BACT2.710e-2429.19Histidine kinase n=1 Tax=Candidatus Nitronauta lit... [more]
L0H338_9GAMM2.280e-2330.72Histidine kinase n=1 Tax=Thioflavicoccus mobilis 8... [more]
UPI001C65A35E9.150e-2228.67transporter substrate-binding domain-containing pr... [more]
A0A418YFU2_9GAMM3.410e-2034.07Histidine kinase n=1 Tax=Motilimonas pumila TaxID=... [more]
I3Y8B1_THIV62.100e-1936.41Histidine kinase n=3 Tax=Thiocystis TaxID=13724 Re... [more]
UPI001908AAF72.910e-1935.48PAS domain S-box protein n=1 Tax=Thiocystis violac... [more]
A0A8J7PLD0_9BACT5.330e-1939.73PAS domain S-box protein n=1 Tax=Zavarzinella sp. ... [more]
UPI001ADDB7F19.320e-1928.52response regulator n=1 Tax=Marinobacterium alkalit... [more]
A0A3C0QCY7_9GAMM4.050e-1834.91Histidine kinase (Fragment) n=1 Tax=Gammaproteobac... [more]
UPI0013D878F44.350e-1829.38PAS domain S-box protein n=1 Tax=Desulfopila sp. I... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000014PAS domainSMARTSM00091pas_2coord: 144..209
e-value: 2.2E-10
score: 50.5
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 144..269
e-value: 4.4E-16
score: 57.1
IPR000014PAS domainPROSITEPS50112PAScoord: 142..196
score: 17.411
IPR013767PAS foldPFAMPF00989PAScoord: 148..204
e-value: 2.3E-11
score: 43.7
NoneNo IPR availableGENE3D3.30.450.20coord: 141..264
e-value: 4.3E-23
score: 83.6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..125
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 126..280
NoneNo IPR availableTMHMMTMhelixcoord: 106..128
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 155..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86048contigM-pyrifera_M_contig86048:10..849 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86048.20054.1mRNA_M-pyrifera_M_contig86048.20054.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86048 10..849 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86048.20054.1 ID=prot_M-pyrifera_M_contig86048.20054.1|Name=mRNA_M-pyrifera_M_contig86048.20054.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=280bp
YAFDSEARFLSPSRFEDRLVEQGVLDGSSVLALDVSVPGAGVDAPLTQMA
QSAVAGGRGVDAEGYTGYLGNTVVGAWEWNANLGFGIATEQSAEEAYTVL
DGSHSIMDVLASIALLLIGGLFFLFSRFRRRLTASQAVVGEVADRLGTVV
DQTSDGIIVTDEAGSILLFNKAATALFGYQPDEVLGRSVDLLVPPDFRTG
HEARVSGFVGGATAQQRLMAPDRSHVLALRSDTSVFPAAITLTSVSLSDG
NRVAIAAIRDQTSELAYQDRLVRSNRDLER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR013767PAS_fold
IPR035965PAS-like_dom_sf