prot_M-pyrifera_M_contig86039.20049.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86039.20049.1
Unique Nameprot_M-pyrifera_M_contig86039.20049.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig86039.20049.1 vs. uniprot
Match: A0A367JSH7_RHIST (RRM domain-containing protein (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367JSH7_RHIST)

HSP 1 Score: 147 bits (372), Expect = 6.160e-43
Identity = 71/131 (54.20%), Postives = 98/131 (74.81%), Query Frame = 0 
Query:    5 EEKRAAKAAR--------GVVYVGRLPYGFFERELRGYFSQFGELTRLRLSRNKKPGKSKHYAFLEFRDPDVAEIVAETMDGYLLYRHILQCSVVAPARVHPRLFRGANRRFVPAQQRAAARILRNAVRSP 127
            ++K+AAK+A+        GV+Y+GR+P+GF+E+E+RGYFSQFG++TRLRLSRNKK GK KHYAF+EF+  +VAEIVAETMD YLL+ H+L+C VV P +VH +LF G+N  + P       R + N  ++P
Sbjct:    4 DKKKAAKSAKSTKAEEEKGVIYLGRIPHGFYEKEMRGYFSQFGDITRLRLSRNKKTGKPKHYAFIEFQSREVAEIVAETMDNYLLFSHMLKCQVVPPEKVHEKLFNGSNAVYKPFNYELRNRQIHNKRKTP 134
[Close]
BLAST of mRNA_M-pyrifera_M_contig86039.20049.1 vs. uniprot
Match: A0A4P9YU86_9FUNG (RRM domain-containing protein (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YU86_9FUNG)

HSP 1 Score: 144 bits (364), Expect = 6.610e-42
Identity = 69/113 (61.06%), Postives = 87/113 (76.99%), Query Frame = 0 
Query:   15 GVVYVGRLPYGFFERELRGYFSQFGELTRLRLSRNKKPGKSKHYAFLEFRDPDVAEIVAETMDGYLLYRHILQCSVVAPARVHPRLFRGANRRFVPAQQRAAARILRNAVRSP 127
            GVVYVGR+P+GF+E E+RGYF QFG ++RLRLSRNKK G+SKHYAF+EF D DVA++VA+TM+ YLL+ H+L+C VV   +VH RLF GANR+F P      AR   N  R+P
Sbjct:    1 GVVYVGRIPHGFYEDEMRGYFGQFGTVSRLRLSRNKKTGRSKHYAFVEFADADVADVVADTMNNYLLFGHLLKCQVVPAHKVHARLFDGANRKFKPLPLHKMAREEHNRTRTP 113
[Close]
BLAST of mRNA_M-pyrifera_M_contig86039.20049.1 vs. uniprot
Match: S3BPH9_OPHP1 (Ribosomal biogenesis protein gar2 n=1 Tax=Ophiostoma piceae (strain UAMH 11346) TaxID=1262450 RepID=S3BPH9_OPHP1)

HSP 1 Score: 147 bits (371), Expect = 2.850e-41
Identity = 70/106 (66.04%), Postives = 87/106 (82.08%), Query Frame = 0 
Query:    3 AREEKRAAKAARGVVYVGRLPYGFFERELRGYFSQFGELTRLRLSRNKKPGKSKHYAFLEFRDPDVAEIVAETMDGYLLYRHILQCSVVAPARVHPRLFRGANRRF 108
            A+ ++ A +   G+VYVGR+P+GFFE E+R YFSQFG++ RLRLSRN+K G SKHYAF+EF D DVAEIVA+TMD YLL+ HIL+CSVVA  R+ P LF+GANRRF
Sbjct:   84 AQNDESAEEQYGGIVYVGRIPHGFFENEMRSYFSQFGDIRRLRLSRNRKTGASKHYAFIEFTDRDVAEIVAKTMDNYLLFGHILRCSVVASERIPPNLFKGANRRF 189
[Close]
BLAST of mRNA_M-pyrifera_M_contig86039.20049.1 vs. uniprot
Match: A0A2H3JJ57_WOLCO (RNA-binding domain-containing protein n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3JJ57_WOLCO)

HSP 1 Score: 144 bits (362), Expect = 4.490e-41
Identity = 70/121 (57.85%), Postives = 89/121 (73.55%), Query Frame = 0 
Query:    7 KRAAKAARGVVYVGRLPYGFFERELRGYFSQFGELTRLRLSRNKKPGKSKHYAFLEFRDPDVAEIVAETMDGYLLYRHILQCSVVAPARVHPRLFRGANRRFVPAQQRAAARILRNAVRSP 127
            KR     RGV+Y+GR+P+GF+E ++R YFSQFG +TRLRLSRNKK G+SKHYAF+EF    VA+IVAETMD YLL  HILQC V+   +VHP+L+ GANR++    Q   AR+  N  R+P
Sbjct:   31 KRQPTGDRGVIYLGRIPHGFYEDQMRSYFSQFGNVTRLRLSRNKKTGRSKHYAFIEFDSASVAQIVAETMDNYLLMGHILQCKVIPKDKVHPKLWVGANRKWRAVPQDRIARVQHNKKRTP 151
[Close]
BLAST of mRNA_M-pyrifera_M_contig86039.20049.1 vs. uniprot
Match: A0A5B1QF05_9AGAM (RNA-binding domain-containing protein n=1 Tax=Dentipellis sp. KUC8613 TaxID=1883078 RepID=A0A5B1QF05_9AGAM)

HSP 1 Score: 142 bits (358), Expect = 2.090e-40
Identity = 69/120 (57.50%), Postives = 88/120 (73.33%), Query Frame = 0 
Query:    7 KRAAKAARGVVYVGRLPYGFFERELRGYFSQFGELTRLRLSRNKKPGKSKHYAFLEFRDPDVAEIVAETMDGYLLYRHILQCSVVAPARVHPRLFRGANRRFVPAQQRAAARILRNAVRS 126
            KR     RGV+Y+GR+P+GF+E++++ YFSQFGE+TRLRLSRNKK G+SKHY F+EF    VA+IVAETMD YLL  HILQC V+    VHP L+ GANR++ P  Q   AR+  N  R+
Sbjct:   32 KRKPTEDRGVIYLGRIPHGFYEKQMKAYFSQFGEVTRLRLSRNKKTGRSKHYGFVEFDSSSVAQIVAETMDNYLLMGHILQCKVIPKDEVHPELWVGANRKWRPIPQGRIARVKHNKPRT 151
[Close]
BLAST of mRNA_M-pyrifera_M_contig86039.20049.1 vs. uniprot
Match: A0A8H5MG97_9AGAR (RRM domain-containing protein n=1 Tax=Gymnopus confluens TaxID=206315 RepID=A0A8H5MG97_9AGAR)

HSP 1 Score: 144 bits (364), Expect = 2.370e-40
Identity = 74/116 (63.79%), Postives = 90/116 (77.59%), Query Frame = 0 
Query:   14 RGVVYVGRLPYGFFERELRGYFSQFGELTRLRLSRNKKPGKSKHYAFLEFRDPDVAEIVAETMDGYLLYRHILQCSVVAPARVHPRLFRGANR--RFVPAQQRAAARILRNAVRSP 127
            RGV+Y+GRLP+GF+E +L+GYFSQFG++TRLRLSRNKK GKSKHYAFLEF    VA+IVAETMD YLL  HIL+C ++    VHP L+ GANR  R VP QQ   AR+ +N  R+P
Sbjct:  126 RGVLYLGRLPHGFYEDQLKGYFSQFGDVTRLRLSRNKKTGKSKHYAFLEFESSSVAQIVAETMDNYLLMGHILRCKLIPKEEVHPELWIGANRKWRVVPRQQ--VARVAQNKPRTP 239
[Close]
BLAST of mRNA_M-pyrifera_M_contig86039.20049.1 vs. uniprot
Match: I2JYN4_DEKBR (Ribosomal biogenesis protein gar2 n=1 Tax=Brettanomyces bruxellensis AWRI1499 TaxID=1124627 RepID=I2JYN4_DEKBR)

HSP 1 Score: 142 bits (358), Expect = 3.200e-40
Identity = 65/104 (62.50%), Postives = 84/104 (80.77%), Query Frame = 0 
Query:    5 EEKRAAKAARGVVYVGRLPYGFFERELRGYFSQFGELTRLRLSRNKKPGKSKHYAFLEFRDPDVAEIVAETMDGYLLYRHILQCSVVAPARVHPRLFRGANRRF 108
            E+K+  K  RGV+Y+GR+P+GF+E ELR YFSQFGE+TRLRLSRN+K G SKHY F+EF DP+VA I AETM+ YLL+ HIL+C+V+ P ++H  LF GAN +F
Sbjct:   62 EQKKFGK--RGVIYIGRIPHGFYEDELRKYFSQFGEITRLRLSRNRKTGNSKHYGFIEFSDPEVASIAAETMNNYLLFGHILKCAVIPPEKIHDELFNGANTKF 163
[Close]
BLAST of mRNA_M-pyrifera_M_contig86039.20049.1 vs. uniprot
Match: A0A2A9NY98_9AGAR (RRM domain-containing protein n=1 Tax=Amanita thiersii Skay4041 TaxID=703135 RepID=A0A2A9NY98_9AGAR)

HSP 1 Score: 143 bits (360), Expect = 5.830e-40
Identity = 73/126 (57.94%), Postives = 89/126 (70.63%), Query Frame = 0 
Query:    1 ARAREEKRAAKAARGVVYVGRLPYGFFERELRGYFSQFGELTRLRLSRNKKPGKSKHYAFLEFRDPDVAEIVAETMDGYLLYRHILQCSVVAPARVHPRLFRGANRRFVPAQQRAAARILRNAVRS 126
            A+  + KR      G++Y+GRLP+GFFE ELRGYFSQFG +TRLRLSRNKK GKSKHYAFLEF    VA+IVAETMD YL+  HILQC V+   +VHP L+ GANR++    +    RI  N  R+
Sbjct:   96 AKLEKAKRKPTEDHGMIYIGRLPHGFFEDELRGYFSQFGNVTRLRLSRNKKTGKSKHYAFLEFDSSSVAKIVAETMDNYLIMGHILQCKVIPKDKVHPELWVGANRKWKVVPRDRVTRIAHNKKRT 221
[Close]
BLAST of mRNA_M-pyrifera_M_contig86039.20049.1 vs. uniprot
Match: A0A8H6B828_DEKBR (RRM domain-containing protein n=3 Tax=Dekkera bruxellensis TaxID=5007 RepID=A0A8H6B828_DEKBR)

HSP 1 Score: 142 bits (358), Expect = 6.360e-40
Identity = 65/104 (62.50%), Postives = 84/104 (80.77%), Query Frame = 0 
Query:    5 EEKRAAKAARGVVYVGRLPYGFFERELRGYFSQFGELTRLRLSRNKKPGKSKHYAFLEFRDPDVAEIVAETMDGYLLYRHILQCSVVAPARVHPRLFRGANRRF 108
            E+K+  K  RGV+Y+GR+P+GF+E ELR YFSQFGE+TRLRLSRN+K G SKHY F+EF DP+VA I AETM+ YLL+ HIL+C+V+ P ++H  LF GAN +F
Sbjct:  123 EQKKFGK--RGVIYIGRIPHGFYEDELRKYFSQFGEITRLRLSRNRKTGNSKHYGFIEFSDPEVASIAAETMNNYLLFGHILKCAVIPPEKIHDELFNGANTKF 224
[Close]
BLAST of mRNA_M-pyrifera_M_contig86039.20049.1 vs. uniprot
Match: A0A448YQS4_BRENA (DEKNAAC104358 n=1 Tax=Brettanomyces naardenensis TaxID=13370 RepID=A0A448YQS4_BRENA)

HSP 1 Score: 142 bits (359), Expect = 1.400e-39
Identity = 64/107 (59.81%), Postives = 86/107 (80.37%), Query Frame = 0 
Query:    4 REEKRAAKAARGVVYVGRLPYGFFERELRGYFSQFGELTRLRLSRNKKPGKSKHYAFLEFRDPDVAEIVAETMDGYLLYRHILQCSVVAPARVHPRLFRGANRRFVP 110
            +++K +    +GV+YVGR+P+GF+E ELR YFSQFGE+TRLRLSRNKK G+SKHYAF+EF   +VA+I AETM+ YLL+ H+L+CSV+ P ++H  LF GAN +F P
Sbjct:  126 KKQKGSKNEKKGVIYVGRIPHGFYEAELRKYFSQFGEITRLRLSRNKKTGQSKHYAFIEFSSNEVAKIAAETMNNYLLFSHLLRCSVIPPEKIHDELFNGANTKFKP 232
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86039.20049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A367JSH7_RHIST6.160e-4354.20RRM domain-containing protein (Fragment) n=1 Tax=R... [more]
A0A4P9YU86_9FUNG6.610e-4261.06RRM domain-containing protein (Fragment) n=1 Tax=S... [more]
S3BPH9_OPHP12.850e-4166.04Ribosomal biogenesis protein gar2 n=1 Tax=Ophiosto... [more]
A0A2H3JJ57_WOLCO4.490e-4157.85RNA-binding domain-containing protein n=1 Tax=Wolf... [more]
A0A5B1QF05_9AGAM2.090e-4057.50RNA-binding domain-containing protein n=1 Tax=Dent... [more]
A0A8H5MG97_9AGAR2.370e-4063.79RRM domain-containing protein n=1 Tax=Gymnopus con... [more]
I2JYN4_DEKBR3.200e-4062.50Ribosomal biogenesis protein gar2 n=1 Tax=Brettano... [more]
A0A2A9NY98_9AGAR5.830e-4057.94RRM domain-containing protein n=1 Tax=Amanita thie... [more]
A0A8H6B828_DEKBR6.360e-4062.50RRM domain-containing protein n=3 Tax=Dekkera brux... [more]
A0A448YQS4_BRENA1.400e-3959.81DEKNAAC104358 n=1 Tax=Brettanomyces naardenensis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 16..89
e-value: 1.6E-18
score: 77.5
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 17..84
e-value: 2.1E-14
score: 53.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 15..93
score: 14.658
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..98
e-value: 3.3E-22
score: 81.1
NoneNo IPR availablePANTHERPTHR46754FAMILY NOT NAMEDcoord: 5..119
NoneNo IPR availablePANTHERPTHR46754:SF1MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEINcoord: 5..119
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 15..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86039contigM-pyrifera_M_contig86039:427..807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86039.20049.1mRNA_M-pyrifera_M_contig86039.20049.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86039 427..807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86039.20049.1 ID=prot_M-pyrifera_M_contig86039.20049.1|Name=mRNA_M-pyrifera_M_contig86039.20049.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
ARAREEKRAAKAARGVVYVGRLPYGFFERELRGYFSQFGELTRLRLSRNK
KPGKSKHYAFLEFRDPDVAEIVAETMDGYLLYRHILQCSVVAPARVHPRL
FRGANRRFVPAQQRAAARILRNAVRSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf