prot_M-pyrifera_M_contig85874.20020.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig85874.20020.1
Unique Nameprot_M-pyrifera_M_contig85874.20020.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length49
Homology
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: A0A5C7AYG1_9FLAO (DUF1232 domain-containing protein n=2 Tax=Gelidibacter TaxID=49279 RepID=A0A5C7AYG1_9FLAO)

HSP 1 Score: 60.8 bits (146), Expect = 1.570e-10
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRDAR 42
            P+DAIPDFIP  GLIDDAAV    L+L+ KD++DY  W+D R
Sbjct:   87 PIDAIPDFIPVVGLIDDAAVFAFCLRLLSKDIEDYKNWKDNR 128          
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: A0A1G7HMV7_9PSED (DUF1232 domain-containing protein n=2 Tax=Pseudomonas seleniipraecipitans TaxID=640205 RepID=A0A1G7HMV7_9PSED)

HSP 1 Score: 59.7 bits (143), Expect = 5.880e-10
Identity = 26/44 (59.09%), Postives = 32/44 (72.73%), Query Frame = 0
Query:    1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRDARKR 44
            PLDAIPDFIPG GL+DD AV+   +K  G +LD +  WRDA+ R
Sbjct:   84 PLDAIPDFIPGLGLVDDLAVLAWVMKTWGNELDAFRVWRDAQDR 127          
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: A0A8J7VQA6_9GAMM (DUF1232 domain-containing protein n=1 Tax=Coralloluteibacterium stylophorae TaxID=1776034 RepID=A0A8J7VQA6_9GAMM)

HSP 1 Score: 59.3 bits (142), Expect = 7.090e-10
Identity = 25/41 (60.98%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRDA 41
            P+D +PDFIPG GL+DDA V+GL LK I  DL+DY  W+ A
Sbjct:   88 PIDVLPDFIPGLGLMDDAVVIGLCLKAIRSDLEDYLRWKRA 128          
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: UPI00140C6AE9 (YkvA family protein n=1 Tax=Pseudomaricurvus alcaniphilus TaxID=1166482 RepID=UPI00140C6AE9)

HSP 1 Score: 58.9 bits (141), Expect = 1.240e-9
Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRD 40
            PLDA+PDFIP AG +DDA +  L   L+GKDL+DY  WRD
Sbjct:   92 PLDAVPDFIPLAGYLDDAFIFKLVFDLVGKDLEDYKRWRD 131          
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: A0A656DB64_9BACT (Uncharacterized membrane protein YkvA, DUF1232 family n=1 Tax=Candidatus Kryptobacter tengchongensis TaxID=1643429 RepID=A0A656DB64_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 1.410e-9
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWR 39
            P DAIPDFIPG G IDDAAVVG+ +K I  DL++Y  W+
Sbjct:   89 PADAIPDFIPGIGYIDDAAVVGMVIKAIFSDLENYAQWK 127          
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: UPI000A6A4273 (DUF1232 domain-containing protein n=1 Tax=Neobacillus soli TaxID=220688 RepID=UPI000A6A4273)

HSP 1 Score: 58.5 bits (140), Expect = 1.560e-9
Identity = 24/39 (61.54%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWR 39
            PLD +PDFI G GL+DDAAV+G  +K I K+LDD+ AW+
Sbjct:   90 PLDLVPDFIIGLGLLDDAAVIGYTVKKISKELDDFSAWK 128          
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: A0A259TYX4_9BACT (DUF1232 domain-containing protein n=1 Tax=Rubricoccus marinus TaxID=716817 RepID=A0A259TYX4_9BACT)

HSP 1 Score: 57.8 bits (138), Expect = 2.650e-9
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRD 40
            P+D IPDFIP  G IDDAAV+GLAL+ + KDL+ + AW D
Sbjct:   91 PVDLIPDFIPVVGYIDDAAVIGLALRYVRKDLEAFEAWED 130          
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: A0A4R7PXS1_9FLAO (Uncharacterized membrane protein YkvA (DUF1232 family) n=1 Tax=Gelidibacter sediminis TaxID=1608710 RepID=A0A4R7PXS1_9FLAO)

HSP 1 Score: 57.4 bits (137), Expect = 3.530e-9
Identity = 22/42 (52.38%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRDAR 42
            P+DAIPDF+P  GLIDDAAV    ++L+ KD++DY  W++++
Sbjct:   87 PIDAIPDFLPVVGLIDDAAVFAFCIRLLSKDIEDYKNWKESQ 128          
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: UPI0016725663 (DUF1232 domain-containing protein n=1 Tax=Marinobacter zhanjiangensis TaxID=578215 RepID=UPI0016725663)

HSP 1 Score: 57.0 bits (136), Expect = 6.540e-9
Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRD 40
            PLD IPD I G GL+DDAAVVGL L+L+  DL  Y AW++
Sbjct:   88 PLDLIPDLIVGVGLLDDAAVVGLCLRLVESDLHRYAAWKE 127          
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: UPI00041FECEA (DUF1232 domain-containing protein n=1 Tax=Streptococcus suis TaxID=1307 RepID=UPI00041FECEA)

HSP 1 Score: 54.7 bits (130), Expect = 7.210e-9
Identity = 23/47 (48.94%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRDARKRRQD 47
            P+DA+PDFI GAGL+DDA V+   LKLI  D+DD+ +W+ ++ + ++
Sbjct:    7 PIDALPDFILGAGLLDDAFVLNACLKLIKTDVDDFRSWQASQWKAEE 53          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5C7AYG1_9FLAO1.570e-1061.90DUF1232 domain-containing protein n=2 Tax=Gelidiba... [more]
A0A1G7HMV7_9PSED5.880e-1059.09DUF1232 domain-containing protein n=2 Tax=Pseudomo... [more]
A0A8J7VQA6_9GAMM7.090e-1060.98DUF1232 domain-containing protein n=1 Tax=Corallol... [more]
UPI00140C6AE91.240e-962.50YkvA family protein n=1 Tax=Pseudomaricurvus alcan... [more]
A0A656DB64_9BACT1.410e-964.10Uncharacterized membrane protein YkvA, DUF1232 fam... [more]
UPI000A6A42731.560e-961.54DUF1232 domain-containing protein n=1 Tax=Neobacil... [more]
A0A259TYX4_9BACT2.650e-962.50DUF1232 domain-containing protein n=1 Tax=Rubricoc... [more]
A0A4R7PXS1_9FLAO3.530e-952.38Uncharacterized membrane protein YkvA (DUF1232 fam... [more]
UPI00167256636.540e-962.50DUF1232 domain-containing protein n=1 Tax=Marinoba... [more]
UPI00041FECEA7.210e-948.94DUF1232 domain-containing protein n=1 Tax=Streptoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010652Domain of unknown function DUF1232PFAMPF06803DUF1232coord: 1..23
e-value: 1.7E-7
score: 30.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85874contigM-pyrifera_M_contig85874:709..855 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85874.20020.1mRNA_M-pyrifera_M_contig85874.20020.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig85874 709..855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig85874.20020.1 ID=prot_M-pyrifera_M_contig85874.20020.1|Name=mRNA_M-pyrifera_M_contig85874.20020.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=49bp
PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRDARKRRQDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010652DUF1232