prot_M-pyrifera_M_contig85742.19991.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig85742.19991.1
Unique Name	prot_M-pyrifera_M_contig85742.19991.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	130

Homology

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BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: A0A8B7ZX78_ACAPL (chloride channel protein 2-like isoform X1 n=5 Tax=Valvatida TaxID=41166 RepID=A0A8B7ZX78_ACAPL)

HSP 1 Score: 97.1 bits (240), Expect = 7.340e-21
Identity = 60/133 (45.11%), Postives = 87/133 (65.41%), Query Frame = 0

Query:    1 FVFLVVLGAIVAVVGMAMDAAAAKLQ--QIRHF-LAPSFTFADFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAALV 130
            ++FL +LG I+A++  AMD A AK Q  Q++ F L        +  W G+S+ L + S+   H  S  A GSGIP+++ IL G  L  YLS R L +KV+G+ A+LG+GL +GKEGPFVH+ASI++T L+ L+
Sbjct:   80 WIFLALLGIIMALLSFAMDYAIAKCQTAQVQLFMLLKGLPVLQYFGWVGFSIILIIFSSVFVHLVSPNAIGSGIPEMKTILRGVVLKEYLSFRTLISKVIGVAASLGSGLPIGKEGPFVHIASIVSTMLSKLI 212

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BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: A0A2H2IFV9_CAEJA (Uncharacterized protein n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2IFV9_CAEJA)

HSP 1 Score: 95.9 bits (237), Expect = 1.750e-20
Identity = 63/134 (47.01%), Postives = 90/134 (67.16%), Query Frame = 0

Query:    1 FVFLVVLGAIVAVVGMAMDAAAAKLQ--QIRHF-LAPSFTFA-DFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAALV 130
            ++FL +LG I+A +   MD A   LQ  Q++ F L  ++ F    L W G+ +AL L SA   H+ + +A GSGIP+++ IL G  L  YLSLR L +K++GL  +LG+GL +GKEGPFVHVAS++A+QL+ LV
Sbjct:   52 WIFLALLGFIMAALSFGMDYAILNLQNGQMQLFDLVKTYHFTLALLVWVGYVVALILFSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSLRTLVSKMIGLTFSLGSGLPMGKEGPFVHVASVVASQLSRLV 185

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BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: A0A2G9V5M5_TELCI (Chloride channel protein n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9V5M5_TELCI)

HSP 1 Score: 95.5 bits (236), Expect = 2.490e-20
Identity = 56/131 (42.75%), Postives = 83/131 (63.36%), Query Frame = 0

Query:    1 FVFLVVLGAIVAVVGMAMDAAAAKLQQ-----IRHFLAPSFTFADFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQL 126
            +VFL +LG I+A+  + MD   +KLQ+      RHF +       F  WT + + L   SA   H+ + +A GSGIP+++ +L G  L  YLS+R L +K++GL  +LG+GL +GKEGPFVH+AS++A QL
Sbjct:  108 WVFLALLGLIMAMFSLGMDIMISKLQEGHMAFYRHFKSDPIWVVSFFVWTLYVVILICASALCAHYIAPQAIGSGIPEMKTVLRGVILKEYLSVRTLISKMIGLTLSLGSGLPIGKEGPFVHIASVVANQL 238

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BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: A0A7R9BZS0_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BZS0_9CRUS)

HSP 1 Score: 94.4 bits (233), Expect = 2.560e-20
Identity = 62/133 (46.62%), Postives = 81/133 (60.90%), Query Frame = 0

Query:    1 FVFLVVLGAIVAVVGMAMDAAAAKLQQIRHFLAP---SFTFADFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAALV 130
            +VFL VLG I+AV+   ++       + R +L     S     F+AW  + L L L S    H  SR+A GSGIP+++ IL G  L  YL+ R L AKV+GL A LGAG+ +GKEGPFVH+ASI+AT L  LV
Sbjct:   68 WVFLAVLGLIMAVISFCVEYLVGLCNKARLWLYKDLVSHPVLQFMAWVSFPLFLILFSVGFTHIVSRQASGSGIPEMKTILRGVALKEYLTFRTLVAKVVGLTATLGAGMPLGKEGPFVHIASIVATLLGKLV 200

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BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: A0A0G4F9C3_VITBC (Chloride channel protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F9C3_VITBC)

HSP 1 Score: 95.1 bits (235), Expect = 3.500e-20
Identity = 60/128 (46.88%), Postives = 79/128 (61.72%), Query Frame = 0

Query:    7 LGAIVAVVGMAMDAAAAKLQQIRHFLAPSFTFADF-----LAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAAL 129
            LG + A++  AMD +   L ++RH+L  + T AD      +   GWSL  +  +    H  + +A GSGIP+L+ IL+G  LP YLSLR    K LGL AAL  GL VGKEGPFVH+A+I+A QLA L
Sbjct:   86 LGVLTALISWAMDMSIDLLLELRHWLCGTQTGADSPILSAVTLAGWSLGASAVAVFCCHVIAPEAMGSGIPELKTILSGVLLPRYLSLRAFVGKTLGLTAALAGGLSVGKEGPFVHIAAIIANQLAKL 213

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BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: Q9BMK9-2 (Isoform b of Chloride channel protein clh-3 n=1 Tax=Caenorhabditis elegans TaxID=6239 RepID=Q9BMK9-2)

HSP 1 Score: 94.7 bits (234), Expect = 4.700e-20
Identity = 62/134 (46.27%), Postives = 88/134 (65.67%), Query Frame = 0

Query:    1 FVFLVVLGAIVAVVGMAMDAAAAKLQ--QIRHF-LAPSFTFA-DFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAALV 130
            ++FL +LG I+A +   MD A   LQ  Q+R F L   + F   +L W G+ + L L SA   H+ + +A GSGIP+++ IL G  L  YLS+R L +K++GL  +LG+GL +GKEGPFVHVAS++A+QL  LV
Sbjct:  123 WIFLALLGFIMASLSFGMDYAILNLQNGQMRLFDLVKEYHFTLAYLVWVGYVVGLILLSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSLGSGLPMGKEGPFVHVASVVASQLTRLV 256

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BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: A0A2B4SA43_STYPI (Chloride channel protein 2 n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SA43_STYPI)

HSP 1 Score: 94.7 bits (234), Expect = 4.720e-20
Identity = 59/132 (44.70%), Postives = 82/132 (62.12%), Query Frame = 0

Query:    1 FVFLVVLGAIVAVVGMAMDAAAAKLQ--QIRHFLAPSFTFADFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAALV 130
            +VFL+ LG ++A++   +D A  K Q   I  F  PS TF  ++ WT + L L   S    H  S  A GSGIP+++ IL GT +  YLSLR L AKV+GL+ ALG+ + +GKEGPFVH+AS++A  +   V
Sbjct:   82 WVFLLFLGIVMALISFVLDLAIDKCQTAHIWLFNLPSNTFLQYIVWTSFPLCLVTFSVGFTHLVSPHAIGSGIPEMKVILRGTVMKRYLSLRTLIAKVVGLLTALGSSIPIGKEGPFVHIASMVARSMGKFV 213

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BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: UPI001454F829 (chloride channel protein 2-like isoform X1 n=4 Tax=Asteroidea TaxID=7588 RepID=UPI001454F829)

HSP 1 Score: 94.7 bits (234), Expect = 4.730e-20
Identity = 60/133 (45.11%), Postives = 87/133 (65.41%), Query Frame = 0

Query:    1 FVFLVVLGAIVAVVGMAMDAAAAKLQ--QIRHFLA-PSFTFADFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAALV 130
            ++FL +LG I+A++  AMD A AK Q  Q++ +L         +LAWTG+ +A  + S    H  S  A GSGIP+++ IL G  L  YLS R L +KV+G+  +LG+GL +GKEGPFVH+ASI++T L+ L+
Sbjct:   80 WIFLALLGIIMALLSFAMDYAIAKFQTAQVQLYLVMKGQPVLQYLAWTGFPVAFIIFSTGFVHLVSPNAIGSGIPEMKTILRGVVLKEYLSFRTLVSKVVGVATSLGSGLPIGKEGPFVHIASIVSTILSKLI 212

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BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: CLH3_CAEEL (Chloride channel protein clh-3 n=8 Tax=Caenorhabditis elegans TaxID=6239 RepID=CLH3_CAEEL)

HSP 1 Score: 94.7 bits (234), Expect = 4.780e-20
Identity = 62/134 (46.27%), Postives = 88/134 (65.67%), Query Frame = 0

Query:    1 FVFLVVLGAIVAVVGMAMDAAAAKLQ--QIRHF-LAPSFTFA-DFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAALV 130
            ++FL +LG I+A +   MD A   LQ  Q+R F L   + F   +L W G+ + L L SA   H+ + +A GSGIP+++ IL G  L  YLS+R L +K++GL  +LG+GL +GKEGPFVHVAS++A+QL  LV
Sbjct:   52 WIFLALLGFIMASLSFGMDYAILNLQNGQMRLFDLVKEYHFTLAYLVWVGYVVGLILLSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSLGSGLPMGKEGPFVHVASVVASQLTRLV 185

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BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: A9V6T5_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V6T5_MONBE)

HSP 1 Score: 94.7 bits (234), Expect = 4.790e-20
Identity = 56/124 (45.16%), Postives = 80/124 (64.52%), Query Frame = 0

Query:    7 LGAIVAVVGMAMDAAAAKLQQIRHF----LAPSFTFADFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQL 126
            LG  +A++G  +D A + L  +R      + PS+ F   +AW+ +++   + +    HW S  A GSGIPQ++ IL GT + GYLS R LAAK++GL+ A G+GL VGKEGPFVH+ASI+  QL
Sbjct:  321 LGVSIALIGFCLDFAISALHHLRDLATSGIHPSYMF---VAWSAFTVTCVIMATATTHWLSADAIGSGIPQMKTILQGTPIEGYLSGRTLAAKIVGLIFAEGSGLPVGKEGPFVHMASIVQEQL 441

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A8B7ZX78_ACAPL	7.340e-21	45.11	chloride channel protein 2-like isoform X1 n=5 Tax...	[more]
A0A2H2IFV9_CAEJA	1.750e-20	47.01	Uncharacterized protein n=1 Tax=Caenorhabditis jap...	[more]
A0A2G9V5M5_TELCI	2.490e-20	42.75	Chloride channel protein n=1 Tax=Teladorsagia circ...	[more]
A0A7R9BZS0_9CRUS	2.560e-20	46.62	Hypothetical protein n=1 Tax=Notodromas monacha Ta...	[more]
A0A0G4F9C3_VITBC	3.500e-20	46.88	Chloride channel protein n=4 Tax=Vitrella brassica...	[more]
Q9BMK9-2	4.700e-20	46.27	Isoform b of Chloride channel protein clh-3 n=1 Ta...	[more]
A0A2B4SA43_STYPI	4.720e-20	44.70	Chloride channel protein 2 n=3 Tax=Pocilloporidae ...	[more]
UPI001454F829	4.730e-20	45.11	chloride channel protein 2-like isoform X1 n=4 Tax...	[more]
CLH3_CAEEL	4.780e-20	46.27	Chloride channel protein clh-3 n=8 Tax=Caenorhabdi...	[more]
A9V6T5_MONBE	4.790e-20	45.16	Predicted protein n=1 Tax=Monosiga brevicollis Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001807	Chloride channel, voltage gated	PRINTS	PR00762	CLCHANNEL	coord: 95..114 score: 54.3 coord: 64..81 score: 47.33
IPR001807	Chloride channel, voltage gated	PFAM	PF00654	Voltage_CLC	coord: 52..127 e-value: 2.0E-15 score: 56.9
IPR014743	Chloride channel, core	GENE3D	1.10.3080.10		coord: 1..130 e-value: 7.7E-33 score: 116.0
IPR014743	Chloride channel, core	SUPERFAMILY	81340	Clc chloride channel	coord: 2..128
None	No IPR available	PANTHER	PTHR45720	FAMILY NOT NAMED	coord: 2..129
None	No IPR available	PANTHER	PTHR45720:SF10	CHLORIDE CHANNEL PROTEIN 2	coord: 2..129
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..130
None	No IPR available	TMHMM	TMhelix		coord: 2..21
None	No IPR available	TMHMM	TMhelix		coord: 41..63

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig85742	contig	M-pyrifera_M_contig85742:7..396 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig85742.19991.1	mRNA_M-pyrifera_M_contig85742.19991.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig85742 7..396 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig85742.19991.1 ID=prot_M-pyrifera_M_contig85742.19991.1|Name=mRNA_M-pyrifera_M_contig85742.19991.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp
FVFLVVLGAIVAVVGMAMDAAAAKLQQIRHFLAPSFTFADFLAWTGWSLA
LALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLV
AALGAGLRVGKEGPFVHVASILATQLAALV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001807	Cl-channel_volt-gated
IPR014743	Cl-channel_core