prot_M-pyrifera_M_contig85723.19983.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig85723.19983.1
Unique Nameprot_M-pyrifera_M_contig85723.19983.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length111
Homology
BLAST of mRNA_M-pyrifera_M_contig85723.19983.1 vs. uniprot
Match: A0A0G4HFR4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HFR4_9ALVE)

HSP 1 Score: 106 bits (265), Expect = 5.350e-27
Identity = 53/112 (47.32%), Postives = 75/112 (66.96%), Query Frame = 0
Query:    2 ASIIVRGVTISALGELVSGLGQAFVDAL----SAGTFSVSQPHTGAVWITAVEGRWGSYNGQVVSCYYHPSKEHTATTVGKVGTKKSTAGAGHWAISTQTKALAGNKALYNT 109
            A  I++G+ I A  +L   L     D L    +A  F +SQPH GAVWI+ ++G+WG++ GQ++S YYHP K H+AT+VG++G KKS   AG WA+S Q +A+ GNKA Y+T
Sbjct:   50 AGTIIKGIAIPAAEKLAEKLADGAWDWLKDNANADLFQLSQPHPGAVWISVLDGQWGTWKGQLMSAYYHPEKGHSATSVGRLGKKKSVEAAGVWAVSLQPRAMFGNKAFYDT 161          
BLAST of mRNA_M-pyrifera_M_contig85723.19983.1 vs. uniprot
Match: A0E1Z8_PARTE (Uncharacterized protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0E1Z8_PARTE)

HSP 1 Score: 95.5 bits (236), Expect = 2.740e-23
Identity = 52/107 (48.60%), Postives = 67/107 (62.62%), Query Frame = 0
Query:    4 IIVRGVTISALGELVSGLGQAFVDALSAGTFSVSQPHTGAVWITAVEGRWGSYNGQVVSCYYHPSKEHTATTVGKVGTKKSTAGAGHWAISTQTKALAGNKALYNTL 110
            IIV  VT + + + +  + Q       A  +S+SQP  G+VWI  ++G     NGQV+S +YHP+K HTATTVGK+G K+S AG G WA S QTK   GNKA YN L
Sbjct:    5 IIVAQVTEALIEDGIKLMRQIIGSYFDATCYSISQPAEGSVWIMYLDGNHYLQNGQVLSMFYHPTKRHTATTVGKLGQKQSVAGPGQWAYSNQTKGAYGNKAYYNIL 111          
BLAST of mRNA_M-pyrifera_M_contig85723.19983.1 vs. uniprot
Match: UPI0015EFE8D4 (lactococcin 972 family bacteriocin n=1 Tax=Streptomyces sp. WELS2 TaxID=2749435 RepID=UPI0015EFE8D4)

HSP 1 Score: 48.1 bits (113), Expect = 6.270e-5
Identity = 29/69 (42.03%), Postives = 39/69 (56.52%), Query Frame = 0
Query:   43 AVWITAVEGRW--GSYNGQVVSCYYHPSKEHTATTVGKVGTKKSTAGAGHWAISTQTKALAGNKALYNT 109
            A  ++   G W  G+    V S YYHPSK H +T+VGK   +  TA +G W+I+    AL+GNK  Y T
Sbjct:   26 ATTVSVGGGTWDYGAGTATVWSDYYHPSKCHGSTSVGKT-IQSDTAPSGDWSITQVEAALSGNKTYYKT 93          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85723.19983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0G4HFR4_9ALVE5.350e-2747.32Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0E1Z8_PARTE2.740e-2348.60Uncharacterized protein n=1 Tax=Paramecium tetraur... [more]
UPI0015EFE8D46.270e-542.03lactococcin 972 family bacteriocin n=1 Tax=Strepto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006540Bacteriocin, lactococcin 972PFAMPF09683Lactococcin_972coord: 53..107
e-value: 4.7E-9
score: 36.7
NoneNo IPR availableGENE3D2.60.40.2850coord: 50..109
e-value: 2.6E-6
score: 30.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85723contigM-pyrifera_M_contig85723:196..528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85723.19983.1mRNA_M-pyrifera_M_contig85723.19983.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig85723 196..546 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig85723.19983.1 ID=prot_M-pyrifera_M_contig85723.19983.1|Name=mRNA_M-pyrifera_M_contig85723.19983.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp
MASIIVRGVTISALGELVSGLGQAFVDALSAGTFSVSQPHTGAVWITAVE
GRWGSYNGQVVSCYYHPSKEHTATTVGKVGTKKSTAGAGHWAISTQTKAL
AGNKALYNTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006540Lactococcin_972