prot_M-pyrifera_M_contig85665.19968.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig85665.19968.1
Unique Name	prot_M-pyrifera_M_contig85665.19968.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	281

Homology

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BLAST of mRNA_M-pyrifera_M_contig85665.19968.1 vs. uniprot
Match: A0A5Q0UYQ1_9FABA (DNA-directed RNA polymerase (Fragment) n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A5Q0UYQ1_9FABA)

HSP 1 Score: 529 bits (1363), Expect = 6.100e-184
Identity = 266/281 (94.66%), Postives = 273/281 (97.15%), Query Frame = 0

Query:    1 GGRLELKIARKAMIRARLKRKKKISILLLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 281
            GGRLEL+I RKA I AR+ RK+KISIL+L SAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPV SESLCKELQKKFFQQRCELGR+GRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQ GLALVRLENMV+GTICGAI+HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI
Sbjct:  155 GGRLELEIDRKARIWARVSRKQKISILVLLSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVKGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 435

[Close]

BLAST of mRNA_M-pyrifera_M_contig85665.19968.1 vs. uniprot
Match: A0A4S4EXE5_CAMSI (DNA-directed RNA polymerase n=1 Tax=Camellia sinensis var. sinensis TaxID=542762 RepID=A0A4S4EXE5_CAMSI)

HSP 1 Score: 519 bits (1337), Expect = 3.060e-183
Identity = 262/281 (93.24%), Postives = 270/281 (96.09%), Query Frame = 0

Query:    1 GGRLELKIARKAMIRARLKRKKKISILLLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 281
            GGR EL+I RKA I AR+ RK+KISIL+LSSAMGSNLR+ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGG+PV SESLCKELQKKFFQQRCELG +GRRNMNRRL LDIPQNNTFLLPRDILAA DHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLEN VRGTICGAI+HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI
Sbjct:   49 GGRSELEIDRKARIWARVSRKQKISILVLSSAMGSNLRKILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGNPVFSESLCKELQKKFFQQRCELGSIGRRNMNRRLTLDIPQNNTFLLPRDILAAVDHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENGVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 329

[Close]

BLAST of mRNA_M-pyrifera_M_contig85665.19968.1 vs. uniprot
Match: A0A1P8LDQ9_CITLA (DNA-directed RNA polymerase n=2 Tax=fabids TaxID=91835 RepID=A0A1P8LDQ9_CITLA)

HSP 1 Score: 523 bits (1347), Expect = 5.330e-183
Identity = 261/281 (92.88%), Postives = 273/281 (97.15%), Query Frame = 0

Query:    1 GGRLELKIARKAMIRARLKRKKKISILLLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 281
            GGRLEL+I RKA I AR+ RK+KISIL+LSSAMGSNLREILENVCYPEIFLSFLNDKEK KIGSKENAILEFYQQF+CVGGDPV SESLCKELQKKFFQQRCELGR+GRRN+N+RLNLDIP+NNTFLLPRDILAAADHLIG+KFGMGTLDDMNHLKNKRIRSVADLLQDQ GLALVRLENMVRGTICGAI+HKLIPTPQNLVTSTPLTTT+ESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI
Sbjct:  155 GGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVCYPEIFLSFLNDKEKNKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 435

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BLAST of mRNA_M-pyrifera_M_contig85665.19968.1 vs. uniprot
Match: E3W0I5_PRUPE (DNA-directed RNA polymerase subunit beta n=315 Tax=rosids TaxID=71275 RepID=E3W0I5_PRUPE)

HSP 1 Score: 540 bits (1391), Expect = 9.700e-183
Identity = 273/281 (97.15%), Postives = 277/281 (98.58%), Query Frame = 0

Query:    1 GGRLELKIARKAMIRARLKRKKKISILLLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 281
            GGRLEL+I RKA I AR+ RK+KISIL+LSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI
Sbjct:  155 GGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 435

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BLAST of mRNA_M-pyrifera_M_contig85665.19968.1 vs. uniprot
Match: U5INN4_LAMAM (DNA-directed RNA polymerase (Fragment) n=9 Tax=Lamium TaxID=53158 RepID=U5INN4_LAMAM)

HSP 1 Score: 516 bits (1330), Expect = 3.200e-182
Identity = 259/281 (92.17%), Postives = 271/281 (96.44%), Query Frame = 0

Query:    1 GGRLELKIARKAMIRARLKRKKKISILLLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 281
            GGR EL+I RKA I AR+ RK+KISIL+LSSAMGSNLREIL+NV YPEIFLSFLNDKE+KKIGSKENAILEFYQQFACVGGDPV SESLCKELQKKFFQQRCELG++GRRNMNRRLNLDIP NNTFLLPRDILAAADHLIG+KFGMGTLDDMNHLKNKRIRSVADLLQDQ GL+LVRLEN+VRGTICGAI+HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI
Sbjct:  131 GGRSELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILDNVYYPEIFLSFLNDKERKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGKIGRRNMNRRLNLDIPPNNTFLLPRDILAAADHLIGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLSLVRLENVVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 411

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BLAST of mRNA_M-pyrifera_M_contig85665.19968.1 vs. uniprot
Match: U5IP56_9LAMI (DNA-directed RNA polymerase (Fragment) n=17 Tax=lamiids TaxID=91888 RepID=U5IP56_9LAMI)

HSP 1 Score: 516 bits (1329), Expect = 4.540e-182
Identity = 259/281 (92.17%), Postives = 270/281 (96.09%), Query Frame = 0

Query:    1 GGRLELKIARKAMIRARLKRKKKISILLLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 281
            GGR EL+I RKA I AR+ RK+KISIL+LSSAMGSNLREIL+NV YPEIFLSFLNDKE+KKIGSKENAILEFYQQFACVGGDPV SESLCKELQKKFFQQRCELGR+GRRNMNRRLNLDIP NNTFLLPRDILAAADHLIG+KFGMGTLDDMNHLKNKRIRSVADLLQDQ GL+L RLEN+VRGTICGAI+HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI
Sbjct:  131 GGRSELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILDNVYYPEIFLSFLNDKERKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNLDIPPNNTFLLPRDILAAADHLIGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLSLARLENVVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 411

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BLAST of mRNA_M-pyrifera_M_contig85665.19968.1 vs. uniprot
Match: V9Z7T2_9MAGN (DNA-directed RNA polymerase (Fragment) n=1 Tax=Exbucklandia populnea TaxID=54453 RepID=V9Z7T2_9MAGN)

HSP 1 Score: 528 bits (1361), Expect = 1.090e-181
Identity = 266/281 (94.66%), Postives = 273/281 (97.15%), Query Frame = 0

Query:    1 GGRLELKIARKAMIRARLKRKKKISILLLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 281
            GGRLEL+I RKA I AR+ RK+KISIL+LSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPV SESLCKELQKKFFQQRCELGR+GRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTL+DMNHLKNKRIRSVADLLQDQ G ALVRLEN VRGTICGAI+HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI
Sbjct:  136 GGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLNDMNHLKNKRIRSVADLLQDQFGSALVRLENAVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 416

[Close]

BLAST of mRNA_M-pyrifera_M_contig85665.19968.1 vs. uniprot
Match: A0A1V0J717_9ROSA (DNA-directed RNA polymerase subunit beta n=69 Tax=Maleae TaxID=721813 RepID=A0A1V0J717_9ROSA)

HSP 1 Score: 536 bits (1381), Expect = 2.890e-181
Identity = 271/281 (96.44%), Postives = 275/281 (97.86%), Query Frame = 0

Query:    1 GGRLELKIARKAMIRARLKRKKKISILLLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 281
            GGRLEL+I RKA I AR+ RK+KISIL+L SAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQ GLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI
Sbjct:  155 GGRLELEIDRKARIWARVSRKQKISILVLLSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 435

[Close]

BLAST of mRNA_M-pyrifera_M_contig85665.19968.1 vs. uniprot
Match: A0A1V0IQ30_9ROSA (DNA-directed RNA polymerase subunit beta n=11 Tax=Maleae TaxID=721813 RepID=A0A1V0IQ30_9ROSA)

HSP 1 Score: 536 bits (1381), Expect = 2.890e-181
Identity = 271/281 (96.44%), Postives = 275/281 (97.86%), Query Frame = 0

Query:    1 GGRLELKIARKAMIRARLKRKKKISILLLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 281
            GGRLEL+I RKA I AR+ RK+KISIL+L SAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQ GLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI
Sbjct:  155 GGRLELEIDRKARIWARVSRKQKISILVLLSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 435

[Close]

BLAST of mRNA_M-pyrifera_M_contig85665.19968.1 vs. uniprot
Match: A0A1V0INB1_9ROSA (DNA-directed RNA polymerase subunit beta n=8 Tax=Photinia TaxID=23199 RepID=A0A1V0INB1_9ROSA)

HSP 1 Score: 536 bits (1381), Expect = 2.890e-181
Identity = 271/281 (96.44%), Postives = 275/281 (97.86%), Query Frame = 0

Query:    1 GGRLELKIARKAMIRARLKRKKKISILLLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 281
            GGRLEL+I RKA I AR+ RK+KISIL+L SAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQ GLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI
Sbjct:  155 GGRLELEIDRKARIWARVSRKQKISILVLLSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQRCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLI 435

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig85665.19968.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig85665.19968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A5Q0UYQ1_9FABA	6.100e-184	94.66	DNA-directed RNA polymerase (Fragment) n=3 Tax=Mes...	[more]
A0A4S4EXE5_CAMSI	3.060e-183	93.24	DNA-directed RNA polymerase n=1 Tax=Camellia sinen...	[more]
A0A1P8LDQ9_CITLA	5.330e-183	92.88	DNA-directed RNA polymerase n=2 Tax=fabids TaxID=9...	[more]
E3W0I5_PRUPE	9.700e-183	97.15	DNA-directed RNA polymerase subunit beta n=315 Tax...	[more]
U5INN4_LAMAM	3.200e-182	92.17	DNA-directed RNA polymerase (Fragment) n=9 Tax=Lam...	[more]
U5IP56_9LAMI	4.540e-182	92.17	DNA-directed RNA polymerase (Fragment) n=17 Tax=la...	[more]
V9Z7T2_9MAGN	1.090e-181	94.66	DNA-directed RNA polymerase (Fragment) n=1 Tax=Exb...	[more]
A0A1V0J717_9ROSA	2.890e-181	96.44	DNA-directed RNA polymerase subunit beta n=69 Tax=...	[more]
A0A1V0IQ30_9ROSA	2.890e-181	96.44	DNA-directed RNA polymerase subunit beta n=11 Tax=...	[more]
A0A1V0INB1_9ROSA	2.890e-181	96.44	DNA-directed RNA polymerase subunit beta n=8 Tax=P...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037034	RNA polymerase Rpb2, domain 2 superfamily	GENE3D	3.90.1110.10		coord: 1..147 e-value: 1.2E-27 score: 98.8
None	No IPR available	GENE3D	3.90.1100.10		coord: 148..281 e-value: 1.3E-43 score: 151.4
None	No IPR available	PANTHER	PTHR20856:SF25	DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA	coord: 1..281
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 30..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 24..29
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..23
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 35..281
None	No IPR available	SUPERFAMILY	64484	beta and beta-prime subunits of DNA dependent RNA-polymerase	coord: 3..281
IPR007642	RNA polymerase Rpb2, domain 2	PFAM	PF04561	RNA_pol_Rpb2_2	coord: 3..161 e-value: 4.0E-40 score: 137.5
IPR007645	RNA polymerase Rpb2, domain 3	PFAM	PF04565	RNA_pol_Rpb2_3	coord: 222..281 e-value: 3.0E-20 score: 72.2
IPR015712	DNA-directed RNA polymerase, subunit 2	PANTHER	PTHR20856	DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2	coord: 1..281

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig85665	contig	M-pyrifera_M_contig85665:1..843 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig85665.19968.1	mRNA_M-pyrifera_M_contig85665.19968.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig85665 1..843 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig85665.19968.1 ID=prot_M-pyrifera_M_contig85665.19968.1|Name=mRNA_M-pyrifera_M_contig85665.19968.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=281bp
GGRLELKIARKAMIRARLKRKKKISILLLSSAMGSNLREILENVCYPEIF
LSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVVSESLCKELQKKFFQQ
RCELGRVGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLD
DMNHLKNKRIRSVADLLQDQLGLALVRLENMVRGTICGAIKHKLIPTPQN
LVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGR
TASFRIRDIHPSHYGRICPIDTSEGINVGLI

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR037034	RNA_pol_Rpb2_2_sf
IPR007642	RNA_pol_Rpb2_2
IPR007645	RNA_pol_Rpb2_3
IPR015712	DNA-dir_RNA_pol_su2