prot_M-pyrifera_M_contig8565.19967.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8565.19967.1
Unique Nameprot_M-pyrifera_M_contig8565.19967.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length298
Homology
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BLAST of mRNA_M-pyrifera_M_contig8565.19967.1 vs. uniprot
Match: A0A6H5KV84_9PHAE (VPS9 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV84_9PHAE)

HSP 1 Score: 452 bits (1164), Expect = 1.260e-142
Identity = 239/301 (79.40%), Postives = 261/301 (86.71%), Query Frame = 0 
Query:    1 RAYKEWPWEEDGQKQYEGSLRKVQFVSPVRNAPELSNETRVDEEQRWVSRGHSQATLEIRRKLPDLRDGKRFAVAVRWVMTFDGFCCTLAVFCGTLFFKPSSYAKEIREGCVRGYALSAKRWFAQAEKYAKTHGHVQLRSATSGGSGREG--GGVGNGLGKMSGRVSVLEAMRSSVGSSNSIRLSKCHGYLGEYIYLTREVKRVIQGEAAGDLVLEEDLQMGGGGIPMGQEGAGAGLDGL-EGKRGKGAGPYVSAGPGDLEESSAMSHISVESARTGSWSGSVVGGFGFVDYPAGIPQKQW 298
            R  +EWPWEEDGQ+QYEGSLRKV F+SPVRNAPELSNETRV+EEQRWVSRGH+QATLEIRR+LP+LRDG+RF VAVRWVM +DGF C+LAVFCGTLF+KPSSYAKEIREGCVRGYALS KRWF QAEKY K HG VQLR +  G        GG G    K SGRV VLEAMRSSVGSSNSI+LSKCH +LGEYIYLTREVKRVIQGEAAGDLVLEEDL +GG GIP+GQEGAGAGLDGL EG+R KG  PY+S   GDLEESSAMSH++VESAR+GSWSGS+VGGFGFVDYPAGIP KQW
Sbjct:    4 RGLEEWPWEEDGQRQYEGSLRKVHFMSPVRNAPELSNETRVEEEQRWVSRGHAQATLEIRRRLPELRDGRRFVVAVRWVMKYDGFGCSLAVFCGTLFYKPSSYAKEIREGCVRGYALSVKRWFVQAEKYVKAHGAVQLRQSKDGXXXXXXXEGGYGK---KTSGRVPVLEAMRSSVGSSNSIQLSKCHKFLGEYIYLTREVKRVIQGEAAGDLVLEEDLTIGGAGIPIGQEGAGAGLDGLKEGRRPKG--PYMS---GDLEESSAMSHVTVESARSGSWSGSIVGGFGFVDYPAGIPPKQW 296
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BLAST of mRNA_M-pyrifera_M_contig8565.19967.1 vs. uniprot
Match: D7FJN4_ECTSI (VPS9 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN4_ECTSI)

HSP 1 Score: 376 bits (966), Expect = 1.190e-115
Identity = 209/308 (67.86%), Postives = 231/308 (75.00%), Query Frame = 0 
Query:    1 RAYKEWPWEEDGQKQYEGSLRKVQFVSPVRNAPELSNETRVDEEQRWVSRGHSQATLEIRRKLPDLRDGKRFAVAVRWVMTFDGFCCTLAVFCGTLFFKPSSYAKEIREGCVRGYALSAKRWFAQAEKYAKTHGHVQLRSATSGGSG---------REGGGVGNGLGKMSGRVSVLEAMRSSVGSSNSIRLSKCHGYLGEYIYLTREVKRVIQGEAAGDLVLEEDLQMGGGGIPMGQEGAGAGLDGL-EGKRGKGAGPYVSAGPGDLEESSAMSHISVESARTGSWSGSVVGGFGFVDYPAGIPQKQW 298
            R  +EWPWEEDGQ+QYEGSLRKV F+SPVRNAPELSNETRV+EEQRWVSRGH+QATLEIRR+LP+LRDG+RF VAVRWVM +DGF C+LAVFCGTLF+KPSSYAKEIREGCVRGYALS KRWF QAEKY K HG VQLR +  G            R+G        KMSGRV                                  VKRVIQGEAAGDLVLEEDL++GG GIP+GQEGAGAGLDGL EG+R KG  PY+S   GDLEESSAMSH++VESAR+GSWSGS+VGGFGFVDYPAGIP KQW
Sbjct:   58 RGLEEWPWEEDGQRQYEGSLRKVHFMSPVRNAPELSNETRVEEEQRWVSRGHAQATLEIRRRLPELRDGRRFVVAVRWVMKYDGFGCSLAVFCGTLFYKPSSYAKEIREGCVRGYALSVKRWFVQAEKYVKAHGAVQLRQSKDGXXXXXXXXXXXXRDGK-------KMSGRV----------------------------------VKRVIQGEAAGDLVLEEDLKIGGAGIPIGQEGAGAGLDGLKEGRRPKG--PYMS---GDLEESSAMSHVTVESARSGSWSGSIVGGFGFVDYPAGIPPKQW 319
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8565.19967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KV84_9PHAE1.260e-14279.40VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FJN4_ECTSI1.190e-11567.86VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031968VASt domainPFAMPF16016VAStcoord: 7..111
e-value: 3.3E-6
score: 27.6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..74
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..298
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..98
NoneNo IPR availableTMHMMTMhelixcoord: 76..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8565contigM-pyrifera_M_contig8565:3169..10161 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8565.19967.1mRNA_M-pyrifera_M_contig8565.19967.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8565 3169..10161 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8565.19967.1 ID=prot_M-pyrifera_M_contig8565.19967.1|Name=mRNA_M-pyrifera_M_contig8565.19967.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=298bp
RAYKEWPWEEDGQKQYEGSLRKVQFVSPVRNAPELSNETRVDEEQRWVSR
GHSQATLEIRRKLPDLRDGKRFAVAVRWVMTFDGFCCTLAVFCGTLFFKP
SSYAKEIREGCVRGYALSAKRWFAQAEKYAKTHGHVQLRSATSGGSGREG
GGVGNGLGKMSGRVSVLEAMRSSVGSSNSIRLSKCHGYLGEYIYLTREVK
RVIQGEAAGDLVLEEDLQMGGGGIPMGQEGAGAGLDGLEGKRGKGAGPYV
SAGPGDLEESSAMSHISVESARTGSWSGSVVGGFGFVDYPAGIPQKQW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031968VASt