prot_M-pyrifera_M_contig85589.19950.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig85589.19950.1
Unique Nameprot_M-pyrifera_M_contig85589.19950.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length66
Homology
BLAST of mRNA_M-pyrifera_M_contig85589.19950.1 vs. uniprot
Match: UPI00177E4018 (ATP-dependent zinc protease n=1 Tax=Pseudomonas sp. PDM14 TaxID=2769288 RepID=UPI00177E4018)

HSP 1 Score: 61.2 bits (147), Expect = 8.450e-10
Identity = 28/62 (45.16%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    5 LTGRPFTGALLGFVVAIVFVSPPAFALQKQRLGWIEWAWLQPGHIKVKTKLDTGAKTSSIHA 66
            LT +P T       +A++  +PP  A +K+  GW+E   +QP +I VK KLDTGA+TSS+HA
Sbjct:   35 LTVKPITALTSALSLALLCAAPPLLAAEKKVFGWVEEGLIQPDNIAVKMKLDTGARTSSLHA 96          
BLAST of mRNA_M-pyrifera_M_contig85589.19950.1 vs. uniprot
Match: UPI001CE0FBFA (ATP-dependent zinc protease n=1 Tax=Pseudomonas sp. PDM14 TaxID=2769288 RepID=UPI001CE0FBFA)

HSP 1 Score: 56.2 bits (134), Expect = 3.490e-8
Identity = 24/48 (50.00%), Postives = 35/48 (72.92%), Query Frame = 0
Query:   19 VAIVFVSPPAFALQKQRLGWIEWAWLQPGHIKVKTKLDTGAKTSSIHA 66
            +A++  +PP  A +K+  GW+E   +QP +I VK KLDTGA+TSS+HA
Sbjct:    3 LALLCAAPPLLAAEKKVFGWVEEGLIQPDNIAVKMKLDTGARTSSLHA 50          
BLAST of mRNA_M-pyrifera_M_contig85589.19950.1 vs. uniprot
Match: A0A3F2V958_9GAMM (ATP-dependent zinc protease n=2 Tax=unclassified Ketobacter TaxID=2639109 RepID=A0A3F2V958_9GAMM)

HSP 1 Score: 55.8 bits (133), Expect = 1.140e-7
Identity = 31/69 (44.93%), Postives = 40/69 (57.97%), Query Frame = 0
Query:    8 RPFTGALLGFVVAIVFVSPPAFA----------LQKQRLGWIEWAWLQPGHIKVKTKLDTGAKTSSIHA 66
            R   G +L   ++I+    PA+A           +K  LGW+E+ WL+P  IK K KLDTGAKTSSIHA
Sbjct:    6 RTIVGCIL---LSIIATHSPAYADGKSHDNHEIKEKVILGWLEFMWLKPWQIKTKAKLDTGAKTSSIHA 71          
BLAST of mRNA_M-pyrifera_M_contig85589.19950.1 vs. uniprot
Match: A0A521REV8_9GAMM (Zn_protease domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521REV8_9GAMM)

HSP 1 Score: 53.5 bits (127), Expect = 4.930e-7
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0
Query:    8 RPFTGALLGFVVAIVFVSPPAFALQKQRLGWIEWAWLQPGHIKVKTKLDTGAKTSSIHA 66
            R     LL  ++ I  V P   + +  R+GW+E A+LQP  ++V+ KLDTGAKTS+IHA
Sbjct:    5 RSMKHGLLAILLTIYGVLP--LSAEPARVGWLEGAYLQPWGVRVRAKLDTGAKTSAIHA 61          
BLAST of mRNA_M-pyrifera_M_contig85589.19950.1 vs. uniprot
Match: A0A1G0JPU3_9GAMM (Zn_protease domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_56_15 TaxID=1798298 RepID=A0A1G0JPU3_9GAMM)

HSP 1 Score: 52.8 bits (125), Expect = 8.120e-7
Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0
Query:   21 IVFVSPPAFALQKQRLGWIEWAWLQPGHIKVKTKLDTGAKTSSIHA 66
            I+  S    A + Q +GW+E A+LQP  ++V+ KLDTGAKTS+IHA
Sbjct:    3 IMVCSTLPLAAEPQTVGWLEGAYLQPWGVRVRAKLDTGAKTSTIHA 48          
BLAST of mRNA_M-pyrifera_M_contig85589.19950.1 vs. uniprot
Match: A0A1G0JYJ4_9GAMM (Zn_protease domain-containing protein n=2 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A1G0JYJ4_9GAMM)

HSP 1 Score: 52.8 bits (125), Expect = 1.110e-6
Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 0
Query:   15 LGFVVAIVFVSPPAFALQKQRL-GWIEWAWLQPGHIKVKTKLDTGAKTSSIHA 66
            + F+VA++ +     A  K  + GW+E A+LQP  ++VK KLDTGAKTS+IHA
Sbjct:   19 VAFLVALLLMVTAMPATSKPEIVGWLEGAYLQPWGVRVKAKLDTGAKTSTIHA 71          
BLAST of mRNA_M-pyrifera_M_contig85589.19950.1 vs. uniprot
Match: A0A2K9LPP6_9GAMM (Zn_protease domain-containing protein n=2 Tax=Ketobacter alkanivorans TaxID=1917421 RepID=A0A2K9LPP6_9GAMM)

HSP 1 Score: 51.6 bits (122), Expect = 4.640e-6
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0
Query:    8 RPFTGALLGFVVAIVFVSPPAFAL--------QKQRLGWIEWAWLQPGHIKVKTKLDTGAKTSSIHA 66
            +P T  LL   VA++F++              +K  LGWIE   LQP ++K K KLDTGAKTSSIHA
Sbjct:   37 KPLTRCLL---VALMFMATSQLQAADNSKELSEKVILGWIENVHLQPSNLKAKAKLDTGAKTSSIHA 100          
BLAST of mRNA_M-pyrifera_M_contig85589.19950.1 vs. uniprot
Match: UPI001B3D083C (Uncharacterized protein n=3 Tax=unclassified Methylocaldum TaxID=2622260 RepID=UPI001B3D083C)

HSP 1 Score: 50.4 bits (119), Expect = 7.860e-6
Identity = 23/53 (43.40%), Postives = 35/53 (66.04%), Query Frame = 0
Query:   14 LLGFVVAIVFVSPPAFALQKQRLGWIEWAWLQPGHIKVKTKLDTGAKTSSIHA 66
            LL   +AI+     +   +K  +GW+E  +L+P +I++  KLDTGAKTSS+HA
Sbjct:   17 LLTLSIAILAAEAQSAVREKAVMGWLESVFLKPWNIRITAKLDTGAKTSSLHA 69          
BLAST of mRNA_M-pyrifera_M_contig85589.19950.1 vs. uniprot
Match: A0A3L8C8P1_9GAMM (ATP-dependent zinc protease n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A3L8C8P1_9GAMM)

HSP 1 Score: 50.4 bits (119), Expect = 9.530e-6
Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = 0
Query:   32 QKQRLGWIEWAWLQPGHIKVKTKLDTGAKTSSIHA 66
            +K  LGWIE  +LQP  +K K KLDTGAKTSSIHA
Sbjct:   37 EKLILGWIENIYLQPSGMKTKAKLDTGAKTSSIHA 71          
BLAST of mRNA_M-pyrifera_M_contig85589.19950.1 vs. uniprot
Match: A0A2G2LUX9_9GAMM (Zn_protease domain-containing protein n=1 Tax=Methylophaga sp. TaxID=2024840 RepID=A0A2G2LUX9_9GAMM)

HSP 1 Score: 49.7 bits (117), Expect = 1.530e-5
Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 0
Query:   23 FVSPPAFA-LQKQRL---GWIEWAWLQPGHIKVKTKLDTGAKTSSIHA 66
            F+   AFA  Q Q L   GW+E   LQPG+I+++ KLDTGAKTSS+HA
Sbjct:   27 FIYKLAFADEQTQHLITAGWLEGVLLQPGNIRMRAKLDTGAKTSSLHA 74          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85589.19950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
UPI00177E40188.450e-1045.16ATP-dependent zinc protease n=1 Tax=Pseudomonas sp... [more]
UPI001CE0FBFA3.490e-850.00ATP-dependent zinc protease n=1 Tax=Pseudomonas sp... [more]
A0A3F2V958_9GAMM1.140e-744.93ATP-dependent zinc protease n=2 Tax=unclassified K... [more]
A0A521REV8_9GAMM4.930e-745.76Zn_protease domain-containing protein n=1 Tax=Gamm... [more]
A0A1G0JPU3_9GAMM8.120e-752.17Zn_protease domain-containing protein n=1 Tax=Gamm... [more]
A0A1G0JYJ4_9GAMM1.110e-649.06Zn_protease domain-containing protein n=2 Tax=uncl... [more]
A0A2K9LPP6_9GAMM4.640e-646.27Zn_protease domain-containing protein n=2 Tax=Keto... [more]
UPI001B3D083C7.860e-643.40Uncharacterized protein n=3 Tax=unclassified Methy... [more]
A0A3L8C8P1_9GAMM9.530e-668.57ATP-dependent zinc protease n=2 Tax=Gammaproteobac... [more]
A0A2G2LUX9_9GAMM1.530e-556.25Zn_protease domain-containing protein n=1 Tax=Meth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10coord: 33..66
e-value: 3.0E-9
score: 39.0
IPR021109Aspartic peptidase domain superfamilySUPERFAMILY50630Acid proteasescoord: 36..66
NoneNo IPR availablePFAMPF05618Zn_proteasecoord: 36..66
e-value: 6.9E-7
score: 29.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..66
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..30
NoneNo IPR availableTMHMMTMhelixcoord: 12..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85589contigM-pyrifera_M_contig85589:2..199 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85589.19950.1mRNA_M-pyrifera_M_contig85589.19950.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig85589 2..199 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig85589.19950.1 ID=prot_M-pyrifera_M_contig85589.19950.1|Name=mRNA_M-pyrifera_M_contig85589.19950.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=66bp
MRRLLTGRPFTGALLGFVVAIVFVSPPAFALQKQRLGWIEWAWLQPGHIK
VKTKLDTGAKTSSIHA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom_sf