prot_M-pyrifera_M_contig85507.19934.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig85507.19934.1
Unique Name	prot_M-pyrifera_M_contig85507.19934.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	107

Homology

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BLAST of mRNA_M-pyrifera_M_contig85507.19934.1 vs. uniprot
Match: A0A1V9ZCL7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCL7_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.830e-6
Identity = 35/104 (33.65%), Postives = 59/104 (56.73%), Query Frame = 0

Query:    5 KVHHVDSLAVGSFGVLGLASWISANTVFTHLPELAQN-PEGFALASTLNVALQAANVAPAIHAFVSARYLSTFVVDAWTIKGLLSLGMVTMTLMALFWRETSLI 107
            KVH      +   G  GL SW+ ++ VF     L Q  PEG+++ + + V+LQ+AN+ P ++  +++R    ++     I GLL LGM+  +L+A+FW  T+ I
Sbjct:    5 KVHSTRKTYIAFVG-FGLGSWVVSDFVFAQFAALMQQTPEGYSIGAYVIVSLQSANIFPMLYMLLNSR--QHYISIPTMIWGLLVLGMIACSLLAVFWNSTTTI 105

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BLAST of mRNA_M-pyrifera_M_contig85507.19934.1 vs. uniprot
Match: A0A8C5CPD7_GADMO (Riboflavin transporter n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5CPD7_GADMO)

HSP 1 Score: 51.2 bits (121), Expect = 3.490e-5
Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = 0

Query:   19 VLGLASWISANTVFTHLPELA-QNPEGFALASTLNVALQAANVAPA----IHAFVSARYLSTFVVDAWTIKGLLSLGMVTMTLMALFWRETSLI 107
            +LG+ SW+S N ++  LP L  Q PEG+ L S L+V +Q ANV P     +H F   +   T V     I  ++ LG     L+ALFW+ET+++
Sbjct:   11 LLGMGSWVSINGLWVELPLLVPQIPEGWYLPSYLSVLIQMANVGPLFVTLMHRFQPGKLNETAV-----IYFIIGLGTAASLLLALFWKETTVV 99

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BLAST of mRNA_M-pyrifera_M_contig85507.19934.1 vs. uniprot
Match: UPI001C360310 (Uncharacterized protein n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI001C360310)

HSP 1 Score: 50.4 bits (119), Expect = 6.530e-5
Identity = 31/88 (35.23%), Postives = 55/88 (62.50%), Query Frame = 0

Query:   21 GLASWISANTVFTHLPELAQN-PEGFALASTLNVALQAANVAPAIHAFVSARYLSTFVVDAWTIKGLLSLGMVTMTLMALFWRETSLI 107
            G+ +W+  N ++  LP L +  PEG+AL S++ +A+Q ANV   ++ F+  + L    +D++ I GLL+LG + + L A  + +TS+I
Sbjct:   85 GMGTWLGVNGIYVQLPLLVERLPEGWALPSSMVLAVQLANVGLLVYGFL--QRLRPNSLDSYYIYGLLTLGTLALVLNAFLYDQTSVI 170

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BLAST of mRNA_M-pyrifera_M_contig85507.19934.1 vs. uniprot
Match: UPI0011822097 (Uncharacterized protein n=6 Tax=Manduca sexta TaxID=7130 RepID=UPI0011822097)

HSP 1 Score: 50.4 bits (119), Expect = 6.550e-5
Identity = 31/88 (35.23%), Postives = 55/88 (62.50%), Query Frame = 0

Query:   21 GLASWISANTVFTHLPELAQN-PEGFALASTLNVALQAANVAPAIHAFVSARYLSTFVVDAWTIKGLLSLGMVTMTLMALFWRETSLI 107
            G+ +W+  N ++  LP L +  PEG+AL S++ +A+Q ANV   ++ F+  + L    +D++ I GLL+LG + + L A  + +TS+I
Sbjct:   85 GMGTWLGVNGIYVQLPLLVERLPEGWALPSSMVLAVQLANVGLLVYGFL--QRLRPNSLDSYYIYGLLTLGTLALVLNAFLYDQTSVI 170

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig85507.19934.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig85507.19934.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A1V9ZCL7_9STRA	2.830e-6	33.65	Uncharacterized protein n=1 Tax=Thraustotheca clav...	[more]
A0A8C5CPD7_GADMO	3.490e-5	38.30	Riboflavin transporter n=1 Tax=Gadus morhua TaxID=...	[more]
UPI001C360310	6.530e-5	35.23	Uncharacterized protein n=1 Tax=Manduca sexta TaxI...	[more]
UPI0011822097	6.550e-5	35.23	Uncharacterized protein n=6 Tax=Manduca sexta TaxI...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12929:SF10	RIBOFLAVIN TRANSPORTER RFT-2	coord: 19..106
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..32
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 80..101
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 102..107
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 44..68
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 33..43
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 69..79
None	No IPR available	TMHMM	TMhelix		coord: 80..102
None	No IPR available	TMHMM	TMhelix		coord: 13..35
None	No IPR available	TMHMM	TMhelix		coord: 45..67
IPR009357	Solute carrier family 52, riboflavin transporter	PANTHER	PTHR12929	PERV-A RECEPTOR	coord: 19..106

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig85507	contig	M-pyrifera_M_contig85507:463..861 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig85507.19934.1	mRNA_M-pyrifera_M_contig85507.19934.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig85507 463..861 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig85507.19934.1 ID=prot_M-pyrifera_M_contig85507.19934.1|Name=mRNA_M-pyrifera_M_contig85507.19934.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
RVSEKVHHVDSLAVGSFGVLGLASWISANTVFTHLPELAQNPEGFALAST
LNVALQAANVAPAIHAFVSARYLSTFVVDAWTIKGLLSLGMVTMTLMALF
WRETSLI

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009357	Riboflavin_transptr