prot_M-pyrifera_M_contig8544.19917.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8544.19917.1
Unique Nameprot_M-pyrifera_M_contig8544.19917.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length384
Homology
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BLAST of mRNA_M-pyrifera_M_contig8544.19917.1 vs. uniprot
Match: D7FVG4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVG4_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 3.300e-32
Identity = 280/380 (73.68%), Postives = 297/380 (78.16%), Query Frame = 0 
Query:    1 NSRAPRFQQFGRVGGEGGKVAEGLYEDFGMNNVREYSAETADERKLILKRLEGEIKMRPSAVAEMMEQEPRLAEQSPEAISERFTWLKERLKLSEEQARSLVHRRPSVLCRGVKDGMEPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDARLLLRSTEVLDSKLVFFXXXXXXXXXXXXXXXXXXXXXXXXXXELMLAPRVAALKSAGVDVSFSLHWNTVAFGPRGNVFDDWVDRQAKR 380
            N+ APRFQ FGR GGEG KVAE LYEDFG+NN+++YS E  DERK +L  LEG+++M   A+A+M+EQEPR+AEQ   AIS R                      PSVLCR V D MEPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LLLRSTEVLD+K+ FF                          +LMLAPRVA LK AGV VSFS HWN +AFGPRG  FD WV RQA R
Sbjct:   72 NADAPRFQPFGRAGGEGSKVAERLYEDFGINNLKKYSPEATDERKRVLTWLEGKVRMSSRAIADMVEQEPRIAEQETGAISARLXXXXXXXXXXXXXXXXXXXXXPSVLCRSVDDSMEPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLRSTEVLDAKVAFFCQEMGATLEDVRAVLMTSPNFLLISIDLMLAPRVATLKDAGVKVSFSAHWNDLAFGPRGEAFDFWVRRQASR 451
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8544.19917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVG4_ECTSI3.300e-3273.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 247..279
e-value: 2300.0
score: 1.0
coord: 99..131
e-value: 0.16
score: 21.1
coord: 320..351
e-value: 2.3
score: 17.2
coord: 136..168
e-value: 1.5
score: 17.8
coord: 284..315
e-value: 120.0
score: 11.2
coord: 63..94
e-value: 320.0
score: 7.7
coord: 173..205
e-value: 0.23
score: 20.5
coord: 210..242
e-value: 0.63
score: 19.1
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 209..358
e-value: 2.1E-12
score: 46.6
coord: 56..200
e-value: 3.8E-16
score: 58.9
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 149..351
e-value: 4.8E-28
score: 100.1
coord: 32..148
e-value: 1.9E-15
score: 58.8
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 165..345
coord: 59..161
NoneNo IPR availablePANTHERPTHR13068:SF5TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIALcoord: 165..345
coord: 59..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8544contigM-pyrifera_M_contig8544:3192..4343 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8544.19917.1mRNA_M-pyrifera_M_contig8544.19917.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8544 3192..4343 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8544.19917.1 ID=prot_M-pyrifera_M_contig8544.19917.1|Name=mRNA_M-pyrifera_M_contig8544.19917.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=384bp
NSRAPRFQQFGRVGGEGGKVAEGLYEDFGMNNVREYSAETADERKLILKR
LEGEIKMRPSAVAEMMEQEPRLAEQSPEAISERFTWLKERLKLSEEQARS
LVHRRPSVLCRGVKDGMEPKVRWLQEELRLSDDEVASMVTSAPNILSVSV
EGGMVPKLAWLSNRLRLSHEELAVVVTTCPQLLTSSVEGALEPRLKWLQE
NLQIGGTILRERVLSFPWLLNLSEEGKLTPTYEFLKADLLLDDIEIRKTL
FRNPRMFLVPLRPALASTKKWLCQSLGMEEHEADAVLTRDARLLLRSTEV
LDSKLVFFCQEMGATLEELREVLLASPNLLLVSVELMLAPRVAALKSAGV
DVSFSLHWNTVAFGPRGNVFDDWVDRQAKRSSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf