prot_M-pyrifera_M_contig85096.19832.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig85096.19832.1
Unique Nameprot_M-pyrifera_M_contig85096.19832.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length223
Homology
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A7V3I7B5_9BACT (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V3I7B5_9BACT)

HSP 1 Score: 135 bits (340), Expect = 2.670e-34
Identity = 93/225 (41.33%), Postives = 122/225 (54.22%), Query Frame = 0
Query:    1 MLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQ---AWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGA------RMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQ--LDLVAVEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAAR 214
            +LA  +P  LL APR   R+ + LA  AGVS  S  R+++ LE D ++  G   L LVRI  LL    AWR   Q    +WLV+      DP     +AL     + A+ VG   A      R+CLG FAA+ ALG GFV G P H+Y E   P + ++  L +   EH  +A   +  P  PE+VFR  V ++GVP AD LQ W+DVS H +RG+ QA EIA R
Sbjct:  168 LLAESIPVNLLSAPRARYRNPTELARAAGVSVMSAFRLVRQLENDGFVDPGEESLELVRIPELLSRWSAWREPIQEFPVRWLVKR-----DPA--AVAALLSSYSAGAASVGDSAAERRRRPRVCLGLFAAADALGFGFVHGVPPHIYMERFDPGVLQRFGLSVEGAEHSPDA--FIRIPPNPEAVFRAAVIKDGVPCADVLQVWLDVSDHPSRGKAQADEIARR 383          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A2V9AEK4_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9AEK4_9BACT)

HSP 1 Score: 130 bits (327), Expect = 9.620e-34
Identity = 89/220 (40.45%), Postives = 120/220 (54.55%), Query Frame = 0
Query:    1 MLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPL--DHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVA-VEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARIWS 217
            +LA  +P   L APRG  + AS LAE AGVS  S  R ++    + +L  G   LRLVR+  LL  W  ++Q  + +  +R  L  G     + V S  +  A + A  +     R+CLG FAA+ ALG+GFV G   +LY E    A+ + L L    E  +EA+  V  P   ES FRG V ++GVPV+D LQ W+DVS H +RG+EQA  I  RI S
Sbjct:   20 LLAPRIPEVYLSAPRGRYQGASQLAEAAGVSVMSAFRFVEEFSKEGFLEPGGGVLRLVRVRELLNRWVAASQPRILEIPMRWVLHRGKKALWNAVRSYQSDEAIASADQLSSPRPRLCLGLFAAAEALGIGFVHGVKPYLYLERLNAAVLKDLGLSGNAEEEEEADLYVRIPGNRESAFRGVVRKDGVPVSDILQVWLDVSQHPSRGKEQADLIWRRILS 239          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A2V9GCF2_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9GCF2_9BACT)

HSP 1 Score: 129 bits (324), Expect = 2.040e-32
Identity = 90/222 (40.54%), Postives = 121/222 (54.50%), Query Frame = 0
Query:    1 MLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPL--DHVHSALARRARSHASPVGPEGA---RMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARIWS 217
            +LA  +P   L APRG    AS LAE AGVS  S  R ++    + +L  G   L+LVR+  LL  W  ++QR + +  +R  L  G       V S  +  A S A+PV    +   R+CLG F A+ ALG+GFV GA  +LY E     + + L L      + A+  V  P   ESVFRG V+++GVPV+D LQ W+DVS H +RG+EQA  I  RI S
Sbjct:  108 LLAPRIPDVYLSAPRGHYHGASQLAEAAGVSVMSAFRFVEEFSKESFLESGTGVLQLVRLRELLNRWVAASQRRVLEIPMRWVLQRGKKALWSAVGSYQSDEAMSSANPVDQLSSPRPRLCLGLFEAAEALGIGFVHGAKPYLYLERLNAEVLKDLGLSGNAEEEIADLYVRIPRNRESVFRGVVQKDGVPVSDILQVWLDVSQHPSRGKEQADLIWRRILS 329          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: Q01P64_SOLUE (Uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) TaxID=234267 RepID=Q01P64_SOLUE)

HSP 1 Score: 125 bits (315), Expect = 1.330e-30
Identity = 84/229 (36.68%), Postives = 118/229 (51.53%), Query Frame = 0
Query:    1 MLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQ-----WLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGAR---------MCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARI 215
            +L + +P  LL  PR  +R+ S LA++A VS  S SR++K L  + Y+      L +VR + LL  W  SA RP  +     W+++      D    + S     A S   P      R          C+G FAA+ ALGLGFVRG P +LY E   P L ++L L   +  +  +  +  P+  ES+FR  V R+G+PV+D LQ W+D S H ARG EQ+ EI  RI
Sbjct:  172 LLGQHLPESLLSIPRERIRNTSQLADVARVSMMSASRLVKQLITEGYIDEHEDHLHVVRADDLLDRWI-SANRPRSRDVPAHWIIKK-----DERQFLASVGQYAAESRTDPKPKSRVRNRLVKAQPRCCIGLFAAADALGLGFVRGVPPYLYLEGLDPNLLQRLGLSIEDSGRRPDVYIRVPSNKESIFRAAVIRDGLPVSDVLQVWLDTSTHPARGREQSDEIRRRI 394          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A2V9FI27_9BACT (Uncharacterized protein n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9FI27_9BACT)

HSP 1 Score: 124 bits (312), Expect = 3.640e-30
Identity = 83/221 (37.56%), Postives = 123/221 (55.66%), Query Frame = 0
Query:    1 MLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPL--DHVHSALARRAR----SHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARI 215
            +LA  +P   L APRG+ + AS LA  AGVS  S  R ++    + +L  G   LRLVR   L+  WR ++QR + +  ++  L  G+      + S L++ ++    S+  P  P   R+CL  F A+ ALG+GFVRGA  ++Y E     + + L L      ++A+  V  P   ESVFRG VE++G+PV+D +Q W+DV  H ARG+EQA  I  +I
Sbjct:  175 LLAPRIPESYLSAPRGQYQGASQLAAAAGVSVMSGFRFIEEFSKEGFLESGQGPLRLVRWRELMNRWRAASQRRVVEVPMQWVLHKGEKALRSALRSYLSKESKPSRDSNEHPPSPR-PRICLALFEAAEALGIGFVRGAKPYIYVERLNGDVLKDLGLSENAEEQDADIYVRLPGNRESVFRGVVEKSGLPVSDIIQVWLDVGQHPARGKEQADIIWRKI 394          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A446C646_9BURK (Uncharacterized protein n=2 Tax=Achromobacter veterisilvae TaxID=2069367 RepID=A0A446C646_9BURK)

HSP 1 Score: 122 bits (306), Expect = 1.820e-29
Identity = 86/218 (39.45%), Postives = 118/218 (54.13%), Query Frame = 0
Query:    1 MLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQR-----PLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYC-EAPLPALFEQLDLVAVEHPKEAEWIVVRPA-FPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEI 211
            +LAR++P  LL APR + R+ S LAE A VS+ S SR L+ L ++ YL   +  L+LVR EAL + W  +  R     P    L  P LP    L   H+  A                 CLG FAA+  L +G V G P ++Y  + P P   +  +L+A  HP E   +++R A FP+S FRG ++RNGV V+D +Q W+DV  H ARG EQA+ I
Sbjct:  170 LLARELPEGLLNAPRKKFRNGSELAEAARVSAMSASRFLQQLRSEGYLSDSSPYLKLVRREALFRRWSAATMRSCPEMPCRFLLRMPVLPQIQGLLGGHTEDA-----------------CLGLFAAADELDIGHVSGVPPYVYVHKLPRPGSPDWPELIA--HPSERPDLILRQAVFPQSTFRGAIDRNGVMVSDVIQIWLDVMHHPARGAEQATLI 368          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: UPI001E3B0505 (hypothetical protein n=1 Tax=Luteimonas sp. XNQY3 TaxID=2878686 RepID=UPI001E3B0505)

HSP 1 Score: 120 bits (301), Expect = 9.730e-29
Identity = 79/219 (36.07%), Postives = 116/219 (52.97%), Query Frame = 0
Query:    1 MLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPA-FPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARIWSE 218
            +LA ++PA LL APRGE R  S LA  A VS+ S SR ++ L+ + +L      LRLVR   L + W+ +A R   +  +   +PGG          AR+     S +       C+G FAA+  LG+G V G   +LY     P   +    +    P E   +++R A  PES+FRG V+  G+PV+D LQ W+D S H +RG EQAS + +++ S+
Sbjct:  171 LLAPEIPANLLTAPRGEYRGGSELASAAQVSAMSASRFVRRLQEEGFLDDSGRALRLVRRRELFRRWQSAAMRSSPELPMSFLIPGG----------ARQLNKVVSRL-----EACVGVFAAADMLGIGHVSGVAPYLYVRRLRPPSEDSWPGLVPSPPGEPPQVILRQANAPESLFRGAVQVEGMPVSDVLQIWLDASAHPSRGAEQASLLRSKMLSD 374          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A5P2HAR0_9BURK (RpiR family transcriptional regulator n=1 Tax=Cupriavidus pauculus TaxID=82633 RepID=A0A5P2HAR0_9BURK)

HSP 1 Score: 120 bits (300), Expect = 1.340e-28
Identity = 85/218 (38.99%), Postives = 114/218 (52.29%), Query Frame = 0
Query:    1 MLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAE---WIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARI 215
            +LA ++PA LL APR E +S + LAE A VS  SVSR L AL  D +L  G   LRLVR EAL + W+ SA R      V P  P    +  V     ++       +G   +  C+G FAA+ A GLG V G P H+Y    + +  +      +   +E E    I+ +P FPESVFRG V  + V   DA+Q W+DV  H +RG EQA  I  ++
Sbjct:  167 LLAPEIPASLLTAPRKEFKSGTELAEAAKVSPMSVSRFLGALRRDGFLSSG-RTLRLVRREALFERWKSSAVR------VGPEQPSRYLISDVDGGQLKKF------MGRYRSEACIGLFAAADAYGLGHVSGVPPHVYVRK-IGSSIDGDQWKGIRPAREGEKPSLILRQPLFPESVFRGAVHSDQVSATDAIQVWLDVFLHPSRGREQAKLIEEKL 370          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A7V8WC54_9BACT (RpiR family transcriptional regulator n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V8WC54_9BACT)

HSP 1 Score: 120 bits (301), Expect = 1.510e-28
Identity = 83/216 (38.43%), Postives = 111/216 (51.39%), Query Frame = 0
Query:    1 MLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPA-FPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARI 215
            +LA ++PA LL APRG   +AS LA  A VS  S  R ++ L  + YL   +  L LVR + L   W+ +  R + +  ++  LPG              AR+    V   G R CLG FAA+ AL LGFV G P H+Y E   P+       +      E   +V+R A  P+SVFRG V  +G  VAD +Q W+DV+ H ARG EQA  I  R+
Sbjct:  175 LLAPELPAHLLSAPRGRYGNASQLARAAHVSVMSAFRFVQQLREEGYLHESSSSLELVRRQDLFARWQAAGDRAVRELPMKFRLPGD-------------ARAQLRKVLSSG-RACLGLFAAADALRLGFVDGVPPHVYVERLQPSSLVAWKSLRPSEAGELPDVVLRQAPSPQSVFRGMVRADGAAVADVIQVWLDVASHPARGREQADLIRQRV 376          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: UPI000C9E5E22 (hypothetical protein n=1 Tax=Stenotrophomonas sp. VV52 TaxID=2066958 RepID=UPI000C9E5E22)

HSP 1 Score: 117 bits (292), Expect = 8.300e-28
Identity = 81/218 (37.16%), Postives = 110/218 (50.46%), Query Frame = 0
Query:    1 MLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPAF-PESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARIWS 217
            +LA ++P +LL APR + RS SALA  A VS  S SR ++ L  D +L       RLVR   L + W+ +A R   +  +   +PG            R+ +  AS +       C+G FAA+  L LG V G P HLY     P+       +    P E   I++R A  PES+FRG V  + VPVAD LQ W+D S H ARG EQA  +  ++ S
Sbjct:  119 LLAPELPEDLLNAPRADYRSVSALAGAADVSLMSASRFVQRLREDGFLDDSGDAFRLVRRHELFKLWQSAALRSSPELRMSYVIPGSG---------IRQLQKSASRL-----NACIGLFAAADLLNLGHVSGVPPHLYVRRLAPSSKADWPGLVPSGPGEHPQIILRQASAPESMFRGAVRVDDVPVADVLQIWLDASAHPARGAEQADLLRRKVLS 322          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V3I7B5_9BACT2.670e-3441.33Uncharacterized protein n=1 Tax=Armatimonadetes ba... [more]
A0A2V9AEK4_9BACT9.620e-3440.45Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A2V9GCF2_9BACT2.040e-3240.54Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
Q01P64_SOLUE1.330e-3036.68Uncharacterized protein n=1 Tax=Solibacter usitatu... [more]
A0A2V9FI27_9BACT3.640e-3037.56Uncharacterized protein n=3 Tax=Acidobacteria bact... [more]
A0A446C646_9BURK1.820e-2939.45Uncharacterized protein n=2 Tax=Achromobacter vete... [more]
UPI001E3B05059.730e-2936.07hypothetical protein n=1 Tax=Luteimonas sp. XNQY3 ... [more]
A0A5P2HAR0_9BURK1.340e-2838.99RpiR family transcriptional regulator n=1 Tax=Cupr... [more]
A0A7V8WC54_9BACT1.510e-2838.43RpiR family transcriptional regulator n=1 Tax=Acid... [more]
UPI000C9E5E228.300e-2837.16hypothetical protein n=1 Tax=Stenotrophomonas sp. ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 9..61
e-value: 4.3E-6
score: 28.6
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 11..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85096contigM-pyrifera_M_contig85096:14..682 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85096.19832.1mRNA_M-pyrifera_M_contig85096.19832.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig85096 2..867 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig85096.19832.1 ID=prot_M-pyrifera_M_contig85096.19832.1|Name=mRNA_M-pyrifera_M_contig85096.19832.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=223bp
MLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVR
GAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARR
ARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQ
LDLVAVEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFH
AARGEEQASEIAARIWSERWSH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf