prot_M-pyrifera_M_contig85006.19812.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig85006.19812.1
Unique Nameprot_M-pyrifera_M_contig85006.19812.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length84
Homology
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BLAST of mRNA_M-pyrifera_M_contig85006.19812.1 vs. uniprot
Match: D7FJE6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJE6_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 1.730e-15
Identity = 38/57 (66.67%), Postives = 48/57 (84.21%), Query Frame = 0 
Query:    1 MTLEEYDEMKQQRKPSDRNPDVSLETRLKISARLKEKWKDPTYRERRKGCMPNRQGI 57
            MTLEEY+EMK+++    R+P V+ ETR KISARLK KW+DP+YRERRK CMPNR+G+
Sbjct:   89 MTLEEYEEMKRRKPAGKRDPTVTEETRKKISARLKAKWQDPSYRERRKQCMPNRKGV 145
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BLAST of mRNA_M-pyrifera_M_contig85006.19812.1 vs. uniprot
Match: A0A836CNQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ5_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.300e-6
Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 0 
Query:    1 MTLEEYDEMKQQRKPSDRNPD---VSLETRLKISARLKEKWKDPTYRERRKGCMPNRQGIAHS 60
            MT+EEYD  K++    D       +S ET+ KISARLKEKWKDP +R+ R   +P R+G  HS
Sbjct:  194 MTVEEYDASKRRTPKRDTKGGQVKLSEETKAKISARLKEKWKDPAFRKERLANIPTRKGRGHS 256
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85006.19812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJE6_ECTSI1.730e-1566.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CNQ5_9STRA1.300e-649.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003611Nuclease associated modular domain 3PFAMPF07460NUMOD3coord: 58..72
e-value: 0.17
score: 12.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85006contigM-pyrifera_M_contig85006:378..629 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85006.19812.1mRNA_M-pyrifera_M_contig85006.19812.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig85006 378..632 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig85006.19812.1 ID=prot_M-pyrifera_M_contig85006.19812.1|Name=mRNA_M-pyrifera_M_contig85006.19812.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=84bp
MTLEEYDEMKQQRKPSDRNPDVSLETRLKISARLKEKWKDPTYRERRKGC
MPNRQGIAHSEETKARIAAAVKARWQDPAYREKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003611NUMOD3