prot_M-pyrifera_M_contig84883.19778.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig84883.19778.1
Unique Name	prot_M-pyrifera_M_contig84883.19778.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	68

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19778.1 vs. uniprot
Match: A0A434AE27_9BACT (30S ribosomal protein S2 n=4 Tax=cellular organisms TaxID=131567 RepID=A0A434AE27_9BACT)

HSP 1 Score: 133 bits (335), Expect = 1.020e-38
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0

Query:    1 QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRNS 67
            QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIR ILNKLVFAICEGRSSYI+NS
Sbjct:   74 QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRFILNKLVFAICEGRSSYIQNS 140

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19778.1 vs. uniprot
Match: B9RL72_RICCO (30S ribosomal protein S2, putative n=2 Tax=Ricinus communis TaxID=3988 RepID=B9RL72_RICCO)

HSP 1 Score: 132 bits (332), Expect = 1.340e-38
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 0

Query:    1 QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRN 66
            QQE+YTALRECITLGIPTICLIDTNCDPDLADISIPANDD IASIRLILNKLVFAICEGRSSYIRN
Sbjct:   48 QQEDYTALRECITLGIPTICLIDTNCDPDLADISIPANDDTIASIRLILNKLVFAICEGRSSYIRN 113

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19778.1 vs. uniprot
Match: A0A822ZV14_NELNU (Uncharacterized protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822ZV14_NELNU)

HSP 1 Score: 131 bits (329), Expect = 1.870e-38
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 0

Query:    1 QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRN 66
            QQEEYTALREC+TLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKL+ AICEGRSSYIRN
Sbjct:   24 QQEEYTALRECVTLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLISAICEGRSSYIRN 89

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19778.1 vs. uniprot
Match: A0A835HK12_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835HK12_9MAGN)

HSP 1 Score: 131 bits (330), Expect = 2.400e-38
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 0

Query:    1 QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRN 66
            QQEEYTALREC+TLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLV AICEGRSSYIRN
Sbjct:   44 QQEEYTALRECVTLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEGRSSYIRN 109

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19778.1 vs. uniprot
Match: A0A7T6Y6M7_9ROSI (30S ribosomal protein S2, chloroplastic n=4 Tax=Malpighiales TaxID=3646 RepID=A0A7T6Y6M7_9ROSI)

HSP 1 Score: 135 bits (340), Expect = 2.730e-38
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0

Query:    1 QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRNS 67
            QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRN+
Sbjct:  170 QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRNA 236

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19778.1 vs. uniprot
Match: RR2_SOYBN (30S ribosomal protein S2, chloroplastic n=54 Tax=Pentapetalae TaxID=1437201 RepID=RR2_SOYBN)

HSP 1 Score: 133 bits (335), Expect = 1.550e-37
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0

Query:    1 QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRNS 67
            QQEEYTALRECITL IPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRNS
Sbjct:  170 QQEEYTALRECITLEIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRNS 236

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19778.1 vs. uniprot
Match: A0A0M4MSJ2_LARTR (30S ribosomal protein S2, chloroplastic n=1 Tax=Larrea tridentata TaxID=66636 RepID=A0A0M4MSJ2_LARTR)

HSP 1 Score: 133 bits (335), Expect = 1.550e-37
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0

Query:    1 QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRN 66
            QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLI NKLVFAICEGRSSYIRN
Sbjct:  170 QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLIFNKLVFAICEGRSSYIRN 235

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19778.1 vs. uniprot
Match: A0A7S9H4L4_9ROSI (30S ribosomal protein S2, chloroplastic n=28 Tax=Malpighiales TaxID=3646 RepID=A0A7S9H4L4_9ROSI)

HSP 1 Score: 133 bits (335), Expect = 1.640e-37
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0

Query:    1 QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRN 66
            QQEEYTALRECITLGIPTICLIDTNCDPDL DISIPANDDAIASIRLILNKLVFAICEGRSSYIRN
Sbjct:  172 QQEEYTALRECITLGIPTICLIDTNCDPDLTDISIPANDDAIASIRLILNKLVFAICEGRSSYIRN 237

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19778.1 vs. uniprot
Match: K4K843_9ROSI (Rps2 (Fragment) n=1 Tax=Centroplacus glaucinus TaxID=289629 RepID=K4K843_9ROSI)

HSP 1 Score: 133 bits (335), Expect = 1.860e-37
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0

Query:    1 QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRN 66
            QQEEYTALRECITLGIPTICLIDTNCDPDL DISIPANDDAIASIRLILNKLVFAICEGRSSYIRN
Sbjct:  177 QQEEYTALRECITLGIPTICLIDTNCDPDLTDISIPANDDAIASIRLILNKLVFAICEGRSSYIRN 242

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19778.1 vs. uniprot
Match: A0A410P9V6_9ROSI (30S ribosomal protein S2, chloroplastic n=1 Tax=Commiphora foliacea TaxID=1173001 RepID=A0A410P9V6_9ROSI)

HSP 1 Score: 133 bits (334), Expect = 2.200e-37
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0

Query:    1 QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRN 66
            QQEEYTALREC TLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRN
Sbjct:  170 QQEEYTALRECTTLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRN 235

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig84883.19778.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig84883.19778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A434AE27_9BACT	1.020e-38	97.01	30S ribosomal protein S2 n=4 Tax=cellular organism...	[more]
B9RL72_RICCO	1.340e-38	96.97	30S ribosomal protein S2, putative n=2 Tax=Ricinus...	[more]
A0A822ZV14_NELNU	1.870e-38	95.45	Uncharacterized protein n=1 Tax=Nelumbo nucifera T...	[more]
A0A835HK12_9MAGN	2.400e-38	96.97	Uncharacterized protein n=1 Tax=Coptis chinensis T...	[more]
A0A7T6Y6M7_9ROSI	2.730e-38	98.51	30S ribosomal protein S2, chloroplastic n=4 Tax=Ma...	[more]
RR2_SOYBN	1.550e-37	98.51	30S ribosomal protein S2, chloroplastic n=54 Tax=P...	[more]
A0A0M4MSJ2_LARTR	1.550e-37	98.48	30S ribosomal protein S2, chloroplastic n=1 Tax=La...	[more]
A0A7S9H4L4_9ROSI	1.640e-37	98.48	30S ribosomal protein S2, chloroplastic n=28 Tax=M...	[more]
K4K843_9ROSI	1.860e-37	98.48	Rps2 (Fragment) n=1 Tax=Centroplacus glaucinus Tax...	[more]
A0A410P9V6_9ROSI	2.200e-37	98.48	30S ribosomal protein S2, chloroplastic n=1 Tax=Co...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001865	Ribosomal protein S2	PRINTS	PR00395	RIBOSOMALS2	coord: 31..45 score: 55.28 coord: 10..21 score: 50.51
IPR001865	Ribosomal protein S2	PFAM	PF00318	Ribosomal_S2	coord: 2..59 e-value: 1.3E-19 score: 70.3
None	No IPR available	GENE3D	3.40.50.10490		coord: 1..62 e-value: 2.0E-22 score: 81.1
None	No IPR available	PANTHER	PTHR12534:SF0	28S RIBOSOMAL PROTEIN S2, MITOCHONDRIAL	coord: 1..60
IPR005706	Ribosomal protein S2, bacteria/mitochondria/plastid	PANTHER	PTHR12534	30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR	coord: 1..60
IPR023591	Ribosomal protein S2, flavodoxin-like domain superfamily	SUPERFAMILY	52313	Ribosomal protein S2	coord: 2..64

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig84883	contig	M-pyrifera_M_contig84883:3..206 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig84883.19778.1	mRNA_M-pyrifera_M_contig84883.19778.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig84883 3..206 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig84883.19778.1 ID=prot_M-pyrifera_M_contig84883.19778.1|Name=mRNA_M-pyrifera_M_contig84883.19778.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=68bp
QQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILN
KLVFAICEGRSSYIRNS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001865	Ribosomal_S2
IPR005706	Ribosomal_S2_bac/mit/plastid
IPR023591	Ribosomal_S2_flav_dom_sf