prot_M-pyrifera_M_contig84567.19716.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig84567.19716.1
Unique Nameprot_M-pyrifera_M_contig84567.19716.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length124
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig84567.19716.1 vs. uniprot
Match: A0A024TZN8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZN8_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 3.070e-9
Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 0 
Query:    7 VALGFSTVENFEYVMASPNIVVAIVESLIRSAISMPLHATAAGFTAVEFGFRDMRFRDGEDIPWWDLLRVIAPAVLVHGTFDACAFLIPIFVQ-DQLVASGIELGVAVAVLAISLFFLN 124
            V  GFST+EN  Y   +P++ + +  + IRSA++ PLH   A  T +    + +R         WD+LR IAPA+L+HG +D  AFL   +++ D    S + L  +V  L +   +LN
Sbjct:  514 VGCGFSTMENALYAFLAPSLAMQLWTAAIRSALATPLHMICASLTGMHLVLQ-LRQNPPTTRSRWDVLRAIAPAMLLHGVYDLQAFLFTFWLEVDD--GSVMSLSASVLCLVVGGLYLN 629
[Close]
BLAST of mRNA_M-pyrifera_M_contig84567.19716.1 vs. uniprot
Match: A0A3R6VBL1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VBL1_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.900e-8
Identity = 40/119 (33.61%), Postives = 63/119 (52.94%), Query Frame = 0 
Query:    7 VALGFSTVENFEYVMASPNIVVAIVESLIRSAISMPLHATAAGFTAVEFGFRDMRFRDGEDIPWWDLLRVIAPAVLVHGTFDACAFLIPIFVQ-DQLVASGIELGVAVAVLAISLFFLN 124
            V  GFST+EN  Y   +P++ + +  + IRSA++ PLH   A  T +    + +          WD+LR IAPA+L+HG +D  AFL   +++ D    S + L  +V  L +   +LN
Sbjct:  337 VGCGFSTMENALYAFLAPSLAMQLWTAAIRSAVATPLHMICASLTGMHLVLQ-LPQNPPTTRSRWDVLRAIAPAMLLHGVYDLQAFLFTFWLEVDD--GSVMSLSASVLCLVVGGLYLN 452
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84567.19716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A024TZN8_9STRA3.070e-934.45Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A3R6VBL1_9STRA1.900e-833.61Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026898Intramembrane metalloprotease PrsWPFAMPF13367PrsW-proteasecoord: 7..109
e-value: 1.0E-8
score: 34.9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..123
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..102
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..72
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 124..124
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..53
NoneNo IPR availableTMHMMTMhelixcoord: 101..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84567contigM-pyrifera_M_contig84567:115..486 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84567.19716.1mRNA_M-pyrifera_M_contig84567.19716.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig84567 85..486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig84567.19716.1 ID=prot_M-pyrifera_M_contig84567.19716.1|Name=mRNA_M-pyrifera_M_contig84567.19716.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp
MAMLLGVALGFSTVENFEYVMASPNIVVAIVESLIRSAISMPLHATAAGF
TAVEFGFRDMRFRDGEDIPWWDLLRVIAPAVLVHGTFDACAFLIPIFVQD
QLVASGIELGVAVAVLAISLFFLN
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026898PrsW