prot_M-pyrifera_M_contig8420.19646.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig8420.19646.1
Unique Name	prot_M-pyrifera_M_contig8420.19646.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	217

Homology

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BLAST of mRNA_M-pyrifera_M_contig8420.19646.1 vs. uniprot
Match: D8LPT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT5_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 1.400e-59
Identity = 151/191 (79.06%), Postives = 156/191 (81.68%), Query Frame = 0

Query:    1 RDGYDFDGHRLRVEMSRGKREFGAGGGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGPPRXXXXXXXXXRQTEYRTVVTGLPQSASWQDLKDHMRKAGDVNYADVDHRGGGVVHFSNREGMDYALRKLDGSEFSNRYDNAIIQVLPHRDSVQSRSXXXXXSPPRRER 191
            RDGYDFDG+RLRVEMSRGKREFG  GGFGXXXXXXXXXXXXXXXXXXXXXXXX  XXX XXXXXXXXXX          MGPPR         RQTEYR VVTGLPQSASWQDLKDHMRKAGDVNYADVDH+GGGVVHF+N+EGMDYALRKLDGSEFSNRYD A I VLPHRDSV+  S     SPPRRER
Sbjct:  112 RDGYDFDGYRLRVEMSRGKREFG--GGFGXXXXXXXXXXXXXXXXXXXXXXXXYGXXXGXXXXXXXXXX----------MGPPRGGFGGG---RQTEYRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDHKGGGVVHFNNKEGMDYALRKLDGSEFSNRYDTATISVLPHRDSVRD-SRSRSRSPPRRER 286

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BLAST of mRNA_M-pyrifera_M_contig8420.19646.1 vs. uniprot
Match: A0A6H5KN34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN34_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 5.650e-48
Identity = 137/168 (81.55%), Postives = 140/168 (83.33%), Query Frame = 0

Query:    1 RDGYDFDGHRLRVEMSRGKREFGAGGGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGPPRXXXXXXXXXRQTEYRTVVTGLPQSASWQDLKDHMRKAGDVNYADVDHRGGGVVHFSNREGMDYALRKLDGSEFSNRYDNAIIQV 168
            RDGYDFDG+RLRVEMSRGKREFG  GGFGXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX                  RQTEYR VVTGLPQSASWQDLKDHMRKAGDVNYADVDH+GGGVVHF+NREGMDYALRKLDGSEFSNRYD AII V
Sbjct:  120 RDGYDFDGYRLRVEMSRGKREFG--GGFGXXXXXXXXXXGGGGXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXG-----------------RQTEYRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDHKGGGVVHFNNREGMDYALRKLDGSEFSNRYDTAIISV 268

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BLAST of mRNA_M-pyrifera_M_contig8420.19646.1 vs. uniprot
Match: A0A836CC30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC30_9STRA)

HSP 1 Score: 141 bits (355), Expect = 5.250e-37
Identity = 89/172 (51.74%), Postives = 100/172 (58.14%), Query Frame = 0

Query:    1 RDGYDFDGHRLRVEMSRGKREFGAGGGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGPPRXXXXXXXXXRQTEYRTVVTGLPQSASWQDLKDHMRKAGDVNYADVDHRGGGVVHFSNREGMDYALRKLDGSEFSNRYDNAIIQVLPHR 172
            RDGY+ DG RLRVE++RG RE G GG                             XXXXX               XXXX GPP          RQTE+R +VTGLP SASWQDLKDHMRKAGDV Y DVDHRGGG+VH++ R  MDYALRKLD SEF N +D + I+VLPHR
Sbjct:   60 RDGYEMDGQRLRVELARGARERGFGG-----------------------------XXXXXFDERGGGRGFGAGRGXXXXXGPPMGGG------RQTEWRVIVTGLPPSASWQDLKDHMRKAGDVVYTDVDHRGGGIVHYATRSDMDYALRKLDDSEFRNPFDKSYIRVLPHR 196

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BLAST of mRNA_M-pyrifera_M_contig8420.19646.1 vs. uniprot
Match: D8LB97_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB97_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 7.820e-37
Identity = 91/197 (46.19%), Postives = 105/197 (53.30%), Query Frame = 0

Query:    1 RDGYDFDGHRLRVEMSRGKRE-FGAGGGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGPPRXXXXXXXXX--RQTEYRTVVTGLPQSASWQDLKDHMRKAGDVNYADVDHRGGGVVHFSNREGMDYALRKLDGSEFSNRYDNAIIQVLPHRDSVQSRSXXXXXSPPRREREXR 194
            RDGYD DG RLRVE+SRG+R+ FG GGG                                                    MG  RXXXXXX     +QTEYR +VTGLP SASWQDLKDHMRKAG+  Y DVDH+GGG+VHF  R+ MDYALRKLDGS+F N ++ + I VLPHR     R        P+R R  R
Sbjct:   60 RDGYDMDGSRLRVEISRGRRDPFGMGGG-------------------------------------------GHGGRMGMPMGGGRXXXXXXGGAGFQQTEYRVIVTGLPPSASWQDLKDHMRKAGEPTYTDVDHKGGGIVHFRTRDDMDYALRKLDGSDFRNPFEKSRISVLPHRGVGGGRDSRSRSRSPKRSRRAR 213

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BLAST of mRNA_M-pyrifera_M_contig8420.19646.1 vs. uniprot
Match: A0A835YQ88_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ88_9STRA)

HSP 1 Score: 131 bits (329), Expect = 9.880e-34
Identity = 58/79 (73.42%), Postives = 69/79 (87.34%), Query Frame = 0

Query:   94 RQTEYRTVVTGLPQSASWQDLKDHMRKAGDVNYADVDHRGGGVVHFSNREGMDYALRKLDGSEFSNRYDNAIIQVLPHR 172
            RQTE+R +VTGLP SASWQDLKDHMRKAGDV Y DVDHRGGG+VH++ R+ M+YALRKLD SEF N +D++ I+VLPHR
Sbjct:   99 RQTEWRVIVTGLPPSASWQDLKDHMRKAGDVVYTDVDHRGGGIVHYNTRDDMEYALRKLDDSEFRNPFDHSFIRVLPHR 177

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BLAST of mRNA_M-pyrifera_M_contig8420.19646.1 vs. uniprot
Match: A0A7S0I1L9_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I1L9_9CRYP)

HSP 1 Score: 105 bits (262), Expect = 5.410e-24
Identity = 43/84 (51.19%), Postives = 65/84 (77.38%), Query Frame = 0

Query:   94 RQTEYRTVVTGLPQSASWQDLKDHMRKAGDVNYADVDHRGGGVVHFSNREGMDYALRKLDGSEFSNRYDNAIIQVLPHRDSVQS 177
            R+++YR +++GLP+SASWQDLKD+ R+AG++ Y DVD +GGG+V F+N +  DYA++K D +EFSN +D   I+V+  RD + S
Sbjct:  102 RRSDYRVIISGLPKSASWQDLKDYFRQAGEIVYTDVDRQGGGIVEFANEDDRDYAIKKFDDTEFSNPFDRGYIRVMKPRDQMTS 185

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BLAST of mRNA_M-pyrifera_M_contig8420.19646.1 vs. uniprot
Match: A0A6U2EED2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2EED2_HEMAN)

HSP 1 Score: 104 bits (259), Expect = 1.160e-23
Identity = 82/182 (45.05%), Postives = 102/182 (56.04%), Query Frame = 0

Query:    1 RDGYDFDGHRLRVEMSRGKREFGAGGGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGPPRXXXXXXXXXRQTEYRTVVTGLPQSASWQDLKDHMRKAGDVNYADVDHRGGGVVHFSNREGMDYALRKLDGSEFSNRY--DNAIIQV-LPHRDSVQSRS 179
            RDG DF+G RLRVEMSR      +GGGFG   XXXXXXXXXXXXXX                                  GPPR         R++++R +++GLP S SWQDLKD MR+AGDV Y DVD +GGGVV FSN+   +YA++KLD +EF +R+  D   ++V  P      SRS
Sbjct:   60 RDGVDFEGQRLRVEMSRA-----SGGGFGDRGXXXXXXXXXXXXXXRGGYDDR---------------------------GPPRGGPARDL--RRSDFRVIISGLPTSCSWQDLKDFMRQAGDVIYTDVDRQGGGVVEFSNKSDQEYAVKKLDDTEFKDRFGGDRTYVRVKFPKDQQPASRS 207

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BLAST of mRNA_M-pyrifera_M_contig8420.19646.1 vs. uniprot
Match: A0A7S4PAY9_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PAY9_GUITH)

HSP 1 Score: 104 bits (259), Expect = 1.260e-23
Identity = 43/84 (51.19%), Postives = 64/84 (76.19%), Query Frame = 0

Query:   94 RQTEYRTVVTGLPQSASWQDLKDHMRKAGDVNYADVDHRGGGVVHFSNREGMDYALRKLDGSEFSNRYDNAIIQVLPHRDSVQS 177
            R+++YR +++GLP+SASWQDLKD  R+AG++ Y DVD +GGG+V F+N +  DYA++K D +EFSN +D   I+V+  RD + S
Sbjct:   98 RRSDYRVIISGLPKSASWQDLKDFFRQAGEIVYTDVDRQGGGIVEFANEDDRDYAIKKFDDTEFSNPFDRGYIRVMKPRDQMTS 181

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BLAST of mRNA_M-pyrifera_M_contig8420.19646.1 vs. uniprot
Match: A0A4Z2AXR0_9TELE (Uncharacterized protein n=1 Tax=Takifugu bimaculatus TaxID=433685 RepID=A0A4Z2AXR0_9TELE)

HSP 1 Score: 102 bits (253), Expect = 1.480e-23
Identity = 65/157 (41.40%), Postives = 76/157 (48.41%), Query Frame = 0

Query:    1 RDGYDFDGHRLRVEMSRGKREFGAGGGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGPPRXXXXXXXXXRQTEYRTVVTGLPQSASWQDLKDHMRKAGDVNYADVDHRGGGVVHFSNREGMDYALRKLDGSEF 157
            RDGYD+DG+RLRVE  RG R    GGG G                                                  MGPPR         R+++YR VV+GLPQS SWQDLKDHMR+AGDV Y DV   G GVV F  +E M YA+RKLD ++F
Sbjct:   73 RDGYDYDGYRLRVEFPRGGR---GGGGRG--------------------------------------------------MGPPRTRYGPPS--RRSDYRVVVSGLPQSGSWQDLKDHMREAGDVCYTDVYRDGTGVVEFVRKEDMTYAVRKLDNTKF 174

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BLAST of mRNA_M-pyrifera_M_contig8420.19646.1 vs. uniprot
Match: H2V3B7_TAKRU (Uncharacterized protein n=3 Tax=Tetraodontiformes TaxID=31022 RepID=H2V3B7_TAKRU)

HSP 1 Score: 103 bits (257), Expect = 1.500e-23
Identity = 69/169 (40.83%), Postives = 83/169 (49.11%), Query Frame = 0

Query:    1 RDGYDFDGHRLRVEMSRGKREFGAGGGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGPPRXXXXXXXXXRQTEYRTVVTGLPQSASWQDLKDHMRKAGDVNYADVDHRGGGVVHFSNREGMDYALRKLDGSEF-SNRYDNAIIQV 168
            RDGYD+DG+RLRVE  RG R    GGG G                                                  MGPPR         R+++YR VV+GLPQS SWQDLKDHMR+AGDV Y DV   G GVV F  +E M YA+RKLD ++F S+  + A I+V
Sbjct:   73 RDGYDYDGYRLRVEFPRGGR---GGGGRG--------------------------------------------------MGPPRTRYGPPS--RRSDYRVVVSGLPQSGSWQDLKDHMREAGDVCYTDVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV 186

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig8420.19646.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig8420.19646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LPT5_ECTSI	1.400e-59	79.06	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KN34_9PHAE	5.650e-48	81.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CC30_9STRA	5.250e-37	51.74	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LB97_ECTSI	7.820e-37	46.19	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YQ88_9STRA	9.880e-34	73.42	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S0I1L9_9CRYP	5.410e-24	51.19	Hypothetical protein n=1 Tax=Hanusia phi TaxID=303...	[more]
A0A6U2EED2_HEMAN	1.160e-23	45.05	Hypothetical protein n=1 Tax=Hemiselmis andersenii...	[more]
A0A7S4PAY9_GUITH	1.260e-23	51.19	Hypothetical protein n=1 Tax=Guillardia theta TaxI...	[more]
A0A4Z2AXR0_9TELE	1.480e-23	41.40	Uncharacterized protein n=1 Tax=Takifugu bimaculat...	[more]
H2V3B7_TAKRU	1.500e-23	40.83	Uncharacterized protein n=3 Tax=Tetraodontiformes ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 99..165 e-value: 6.6E-6 score: 35.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 101..160 e-value: 1.0E-10 score: 41.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 98..173 score: 10.65
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 97..172 e-value: 6.3E-21 score: 76.1
None	No IPR available	PANTHER	PTHR23003:SF27	NUCLEOLAR PROTEIN 3	coord: 1..214
None	No IPR available	PANTHER	PTHR23003	RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN	coord: 1..214
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 91..182

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig8420	contig	M-pyrifera_M_contig8420:247..8876 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig8420.19646.1	mRNA_M-pyrifera_M_contig8420.19646.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig8420 247..8876 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig8420.19646.1 ID=prot_M-pyrifera_M_contig8420.19646.1|Name=mRNA_M-pyrifera_M_contig8420.19646.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp
RDGYDFDGHRLRVEMSRGKREFGAGGGFGGGGYGGGGGGYGGGGGGYGGG
GGGYGGGGGSYGGGGGGYGGGGGGFGGGGMGPPRGGGGGFGGGRQTEYRT
VVTGLPQSASWQDLKDHMRKAGDVNYADVDHRGGGVVHFSNREGMDYALR
KLDGSEFSNRYDNAIIQVLPHRDSVQSRSRSRSRSPPRRERERRRSRSRS
PPPRDSYRGRSRSRSR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf