prot_M-pyrifera_M_contig8398.19593.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8398.19593.1
Unique Nameprot_M-pyrifera_M_contig8398.19593.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length763
Homology
BLAST of mRNA_M-pyrifera_M_contig8398.19593.1 vs. uniprot
Match: D7FXE1_ECTSI (WD repeat-containing protein 60 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXE1_ECTSI)

HSP 1 Score: 359 bits (921), Expect = 3.680e-105
Identity = 341/766 (44.52%), Postives = 400/766 (52.22%), Query Frame = 0
Query:   42 GAGGDRVRAGPNREIRRDNGAGAEASAGGGGGVARPDYLSPSGAQGKDSL--IEAAPSRSRSGAKATRRGSGRGD--------AGGEGRYQERPGRSQQREQLAEYRTTGSPPGNVDRAILDKWRTEASAANGD---RGGAARDGPSTKPNQEPPDEVVEDDN---GYDDEGFEEYSDEFEGEG-DEVPP---ATAPVVAVRSPTARRGXXXXXRDXXXXAIMAGSRLSSGPRVVSPALKMRQ-ADDVQTPDDKALQELRNSLQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVAAAEGGRESGEGGGRGVARGTFSVEGPAESKGGARTRTRSSAFKMADAKELTRALTKGDPRATRVVTIRSASRLEVESVRLFDQPPVAPIDMYYRRLRGQPPLIRQAATQTNEDARSVDTQTDEARETSFEEVQFHLGHDDTALENLMRRLRSSRGTSPAAQEAKRHEGDPSSELTRTE-------KDSAGSTTVFKGLYR-----SGSDDGGGVSRFPETAAAASAMHHARGPRSGGSXXXXXXXXVATSFSKLTLSPRPQRLGNFLRQACVVMETLCEENLLSGGPAGRRGGGKPDDP--GEASDDNGEDERPSLFRA--GTVGKGWQEVGSCAEVAGSRGASGGNTSSSATAAVAEN-----GKEEGKTGTGNGSFKSRLGLGSLLDGVDVVGVAFSKVKRSMLVTAHARTAQREPRDGSVAGLGGARG--ELHPVLEGCGVVCVWNAENV 763
            GAGG+RVR   +   RR++G          G  A PD      AQ K S+   EA  SR+R GAK  RR  G  D        A GE R+Q       QR+Q    R  G   G VDRAIL KWR++ASAA  D   R  A  DG      Q PPD  VED++   GYDDE FEEYSDEF+GEG DE PP     A   +V  P + RG                     G  VVSPALKMR+  D++Q PDDK L+ELR+SL+E                                     XXXXXXXX       G E+       VA+G FSV+  A+ K   R+R + S FKMADAK LTRAL KGDPRA RV  IR ASRLEVESVRLFDQ P+ PID+Y+RRLRGQP LIRQA TQTN+DARSV+ QTDE  + S +EVQFHLGHDDTALENLMRRLRS+R   P   +AK  EG  + + T  +            +TT FKG+Y      +G+D G     +P              PR G +        V+++    TL P P RLG FLRQA VVMETLCEENLL   P  RRGG  P DP  GE  D  G  ER +LF    G  G+GW+EV                    ATAA  E+      +E+ + G   G  + R G G+LL+G +VVGV FSKVKRSMLVTAHAR   R                 E   VLEGCGVVCVWN ENV
Sbjct:   56 GAGGERVREHGSDGPRRESG----------GLAASPDLAL---AQDKGSVRPAEAGSSRTRPGAKGVRRRIGGTDHDGGQVHAALGEERHQ-----IAQRDQPVAERELGGSGGGVDRAILQKWRSDASAAVADDVGRNPALPDGRVAP--QVPPDMEVEDEDCGGGYDDECFEEYSDEFDGEGEDEGPPPPVGKATAASVTRPGSARG-------------------EGGGAVVSPALKMRRPGDNIQAPDDKVLEELRDSLREENIAARERKVARPSPKPSEAATADVKSSSDAKAVRGAXXXXXXXXXXXXXXTGGEASAA----VAKGKFSVDASADVK---RSR-KGSGFKMADAKALTRALAKGDPRAERVRAIRGASRLEVESVRLFDQVPILPIDLYHRRLRGQPALIRQAGTQTNDDARSVEGQTDEIVQ-SHKEVQFHLGHDDTALENLMRRLRSNRRP-PERHQAKGEEGGQTQQRTVVDGGEDVPASGPGSATTTFKGIYNGNGMVAGTDPG--EQEYPA-------------PRYG-TDFDGSSGRVSSAGGSDTLPP-PLRLGKFLRQASVVMETLCEENLLHA-PVKRRGGSHPLDPARGEHEDAVGR-ERGALFSGAGGREGEGWEEVXXXXXXXX-------XXXXXATAAATEDTGSSTAEEKRRQGGDEGRVRGR-GAGALLEGSEVVGVEFSKVKRSMLVTAHARPVGRRXXXXXXXXXXXXXXTDEREAVLEGCGVVCVWNTENV 745          
BLAST of mRNA_M-pyrifera_M_contig8398.19593.1 vs. uniprot
Match: A0A835Z6D0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D0_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.040e-8
Identity = 131/446 (29.37%), Postives = 171/446 (38.34%), Query Frame = 0
Query:  187 VEDDNGYDDEGFEEYSDEFEGE--GDEVPPATAPVVAVRS--PTARRGXXXXXRDXXXXAIMAGSRL--SSGPRVVSPALK-MRQADDVQTPDDKALQELRNSLQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVAAAEGGRESGEGGGRGVARGTFSVEGPAESKGGARTRTRSSAFKMADAKELTRALTKGDPRATR------VVTIRSASRLEVESVRLFDQPPVAPIDMYYRRLRG--------QPPLIRQAATQTNEDARSVDTQTDEARETSFEEVQFHLGHDDTALENLMRRLRSSRGTSPAAQEAKRHEG-DPSSELTRTEKDSAGSTTVFKGLYRSGSDDGGGVSRFPETAAAASAMHHARGPRSGGSXXXXXXXXVATSFSKLTLSPRPQRLGNFLRQACVVMETLCEENL-LSGGPA 609
            V+DD GY DEGFE+YSDEFE E  G       AP  A  S  P     XXXXX  XXXX    GS    SS P      +K +R A D +  + K  + LR +                                                PVA  +GG E      +G   G     GP  +   A+  T+   +++A+AK +++ L     R  R        +  +A+RL  E   L+   PV P++ Y+ RLR                   QT +D R V TQT+ AR    E  QFH+G DDTALEN++ R R+            R +G DP   LT         T   +G+Y  G  +       P T  AA A   A   R                           RL +FLR    V+E LC EN+ LSGG A
Sbjct:   34 VDDDAGYGDEGFEDYSDEFEDEAAGRSAAAVQAPAQASASKRPXXXXXXXXXXXXXXXXXXXXGSSRPSSSVPHATEADMKELRSAMDQENMEAKRARALRPT-------------------------------------EPPPHASAEQQPVAEGKGGVEGAGLRAKGRKGGAGEGAGPKGAALAAQPATQQ--YRLAEAKAVSQRLGGAAARGARCGXXXXARSAAAAARLSTERFVLYSAAPVGPLERYHARLRSGGXXXXXXXXXXXXXXXXQTRDDDRDVGTQTETARAADAE-AQFHMGSDDTALENMLARARARXXXXXXXXXXHRRQGSDPGVTLTAXXXXXXXXTGEGEGVYEHGDREA------PGTVDAAEAEERAAQLR---------------XXXXXXXXXGGARLAHFLRSVAPVVEALCVENIALSGGSA 418          
BLAST of mRNA_M-pyrifera_M_contig8398.19593.1 vs. uniprot
Match: A0A7S2RRM8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRM8_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.910e-7
Identity = 51/125 (40.80%), Postives = 71/125 (56.80%), Query Frame = 0
Query:  391 DPRATRVVTIRSASRLEVESVRLFDQPPVAPIDMYYRRLRGQPPLIRQAATQTNEDARSVDTQTDEARETSFEEVQFHLGHDDTALENLMRRLRSSRGTSPAAQEAKRHEGDPSSELTRTEKDSA 515
            DPR  R+ +I+    +E      FDQ P  P+++Y+RR+RG+  LI Q  TQTN+DAR+V+ QT+E   T  +E+QF  G DDT  E   RRL S R    AA      +G P + L + + D A
Sbjct:  210 DPRLARLKSIQEKVAMEEGRFVAFDQNPQTPLEVYFRRMRGRG-LIAQTFTQTNDDARTVEVQTEETA-TQEQEIQFVFG-DDTEFE---RRLASVRHPCVAA------DGQPRAFLEQEDVDEA 322          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8398.19593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FXE1_ECTSI3.680e-10544.52WD repeat-containing protein 60 n=2 Tax=Ectocarpus... [more]
A0A835Z6D0_9STRA1.040e-829.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2RRM8_9STRA1.910e-740.80Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042505WD repeat-containing protein 60PANTHERPTHR16022FAMILY NOT NAMEDcoord: 102..457
coord: 576..759

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8398contigM-pyrifera_M_contig8398:165..10142 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8398.19593.1mRNA_M-pyrifera_M_contig8398.19593.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8398 165..10142 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8398.19593.1 ID=prot_M-pyrifera_M_contig8398.19593.1|Name=mRNA_M-pyrifera_M_contig8398.19593.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=763bp
MNSDRDRVADGKHPRRRSGGGGGSKKSSRASSSRTAAGAVDGAGGDRVRA
GPNREIRRDNGAGAEASAGGGGGVARPDYLSPSGAQGKDSLIEAAPSRSR
SGAKATRRGSGRGDAGGEGRYQERPGRSQQREQLAEYRTTGSPPGNVDRA
ILDKWRTEASAANGDRGGAARDGPSTKPNQEPPDEVVEDDNGYDDEGFEE
YSDEFEGEGDEVPPATAPVVAVRSPTARRGGGGGGRDGGGGAIMAGSRLS
SGPRVVSPALKMRQADDVQTPDDKALQELRNSLQEENTVARERQVARPLA
EASTTADTKPPGQTATRGSKGSKGSKGARGPVAAAEGGRESGEGGGRGVA
RGTFSVEGPAESKGGARTRTRSSAFKMADAKELTRALTKGDPRATRVVTI
RSASRLEVESVRLFDQPPVAPIDMYYRRLRGQPPLIRQAATQTNEDARSV
DTQTDEARETSFEEVQFHLGHDDTALENLMRRLRSSRGTSPAAQEAKRHE
GDPSSELTRTEKDSAGSTTVFKGLYRSGSDDGGGVSRFPETAAAASAMHH
ARGPRSGGSGSGSGGGGVATSFSKLTLSPRPQRLGNFLRQACVVMETLCE
ENLLSGGPAGRRGGGKPDDPGEASDDNGEDERPSLFRAGTVGKGWQEVGS
CAEVAGSRGASGGNTSSSATAAVAENGKEEGKTGTGNGSFKSRLGLGSLL
DGVDVVGVAFSKVKRSMLVTAHARTAQREPRDGSVAGLGGARGELHPVLE
GCGVVCVWNAENV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042505WDR60