prot_M-pyrifera_M_contig8293.19375.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8293.19375.1
Unique Nameprot_M-pyrifera_M_contig8293.19375.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length333
Homology
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BLAST of mRNA_M-pyrifera_M_contig8293.19375.1 vs. uniprot
Match: D7FQ63_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ63_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 2.430e-85
Identity = 224/333 (67.27%), Postives = 245/333 (73.57%), Query Frame = 0 
Query:    1 MDD-EGEAAARIQAIHRGRLARLSLDRRRRSFVLREATARWEREQAVIKIQAACRGTRGRAETAHYREQQAXXXXXXXXXXXXXARKDVCRTAPRGLPLDRADIKKGLHTLGRSLHDMRQCYVGLMAANAGVSNIDAIVDFPLLQTADLSGNCISSAKPLSSLXXXXXXXXXXXXXTSVLDYELFEGEDFSWKATEDWLHDWRSDVVRSSSMLHRANLSYNSIETMTDMAHHRNLQELDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLPLVELHLDHNSIRKVENVGHGKLPNLRVLQLGYNKLQNLSNLKDSLSLATLDVRFNR 332
            MD+ EG+AAARIQA+ RGRLAR S DRRRRS V REATARWEREQAVIKIQAACRGTRGR ETA YR    XXXXXXXXXXXXX RKD  R +P GLPLDRADIKKGLHTLGR+ HD+R CY+GLMAANAGVSNI++I +FPLLQT DLSGNCISS KPL   XXXXXXXXXXXXX                                              I+++ D++HHRN     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GLPLVELHLDHN I K ENVG GKL +LR+L+LG+N + NLSNLK  LSL TLDVRFN+
Sbjct:    1 MDEMEGQAAARIQAVQRGRLARFSADRRRRSLVRREATARWEREQAVIKIQAACRGTRGREETALYRXXXXXXXXXXXXXXXXXXRKDFNRKSPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIAEFPLLQTVDLSGNCISSTKPLXXXXXXXXXXXXXXXXXX--------------------------------------------IDSLRDLSHHRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPLVELHLDHNYIEKAENVGSGKLASLRILRLGFNDIGNLSNLKTCLSLVTLDVRFNK 289
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BLAST of mRNA_M-pyrifera_M_contig8293.19375.1 vs. uniprot
Match: A0A6H5KB11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB11_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 2.340e-68
Identity = 122/167 (73.05%), Postives = 132/167 (79.04%), Query Frame = 0 
Query:    1 MDD-EGEAAARIQAIHRGRLARLSLDRRRRSFVLREATARWEREQAVIKIQ------AACRGTRGRAETAHYREQQAXXXXXXXXXXXXXARKDVCRTAPRGLPLDRADIKKGLHTLGRSLHDMRQCYVGLMAANAGVSNIDAIVDFPLLQTADLSGNCISSAKPLS 160
            MD+ EG+AAARIQA+ RGRLAR S DRRRRS V REATARWEREQAVIKIQ      AACRGTRGR ETA YREQQA             ARKD  R +P GLPLDRADIKKGLHTLGR+ HD+R CY+GLMAANAGVSNI++IV+FPLLQT DLSGNCISS KPLS
Sbjct:    1 MDEVEGQAAARIQAVQRGRLARFSADRRRRSLVRREATARWEREQAVIKIQLCLAFQAACRGTRGREETALYREQQAAASKIQARIRGDKARKDFNRKSPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIVEFPLLQTVDLSGNCISSTKPLS 167
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BLAST of mRNA_M-pyrifera_M_contig8293.19375.1 vs. uniprot
Match: A0A835YJY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJY7_9STRA)

HSP 1 Score: 114 bits (286), Expect = 9.350e-25
Identity = 122/275 (44.36%), Postives = 149/275 (54.18%), Query Frame = 0 
Query:   84 ARKDVCRTAPRGLPLDRADIKKGLHTLGRSLHDMRQCYVGLMAANAGVSNIDAIVDFPLLQTADLSGNCISSAKPLSSLXXXXXXXXXXXXXTSVLDYELFEGED------------------FSWKATEDW--LHDWRSDVVRSSSMLHRANLSYNSIETMTDMAHHRNLQELDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLPLVELHLDHNSIRK-----VENVGHGKLPNL--RVLQLGYNKLQNLSNLKDSLSLATLDVRFN 331
            A+K V   A  G  LDRA +K+GLHTLGR+ H +R C  G      G+ ++ A+ D+PLLQT D+S N ++   PL +L             T VLD+E+  G D                   +  A   W  L DWRS  VR+ S L  A+LS N+I  M D++ HRNL  L   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+GLPLVEL L                G+G  P L  R L L  N +  LS L+   SL TLD+  N
Sbjct:  126 AQKRVAALADGGTTLDRAAVKRGLHTLGRAPHSLRHCLTGCDLRGLGLRDVAALSDWPLLQTLDVSDNALTELAPLCALPFLCELHAARNGVTEVLDFEVLRGRDQTIALNAYPHVLCAANGTHARSADMPWEDLLDWRSSAVRAESALALADLSENAIAAMRDLSPHRNLHTLLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLPLVELDLXXXXXXXXXXXAAPESGNGCAPPLLLRRLNLADNFIIELSGLQRCASLVTLDLSGN 400
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8293.19375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQ63_ECTSI2.430e-8567.27Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KB11_9PHAE2.340e-6873.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJY7_9STRA9.350e-2544.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 234..247
score: 53.16
coord: 298..311
score: 49.06
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 253..274
e-value: 21.0
score: 13.0
coord: 231..252
e-value: 0.22
score: 20.6
coord: 275..295
e-value: 85.0
score: 8.0
coord: 298..319
e-value: 57.0
score: 9.4
NoneNo IPR availableGENE3D1.20.5.190coord: 41..88
e-value: 1.3E-6
score: 30.1
NoneNo IPR availablePANTHERPTHR23117GUANYLATE KINASE-RELATEDcoord: 212..331
coord: 68..182
NoneNo IPR availablePANTHERPTHR23117:SF18LEUCINE-RICH REPEAT AND GUANYLATE KINASE DOMAIN-CONTAINING PROTEINcoord: 68..182
NoneNo IPR availablePANTHERPTHR23117:SF18LEUCINE-RICH REPEAT AND GUANYLATE KINASE DOMAIN-CONTAINING PROTEINcoord: 212..331
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 128..331
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 232..253
e-value: 52.0
score: 7.4
coord: 298..323
e-value: 22.0
score: 10.5
coord: 162..186
e-value: 35.0
score: 8.8
coord: 275..296
e-value: 410.0
score: 0.1
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 67..89
e-value: 1.5
score: 17.9
coord: 41..63
e-value: 2.2
score: 17.3
coord: 3..25
e-value: 50.0
score: 7.9
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 44..59
e-value: 0.013
score: 15.2
coord: 70..87
e-value: 0.054
score: 13.3
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 68..94
score: 7.876
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 4..31
score: 8.425
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 42..71
score: 7.95
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 107..187
e-value: 2.2E-8
score: 35.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 194..332
e-value: 3.4E-25
score: 90.2
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 277..332
e-value: 1.9E-6
score: 27.5
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 255..276
score: 7.835
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 300..321
score: 7.951
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 142..163
score: 7.181
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 164..185
score: 6.58
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 233..254
score: 9.36
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 277..297
score: 6.488
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 211..232
score: 5.202
IPR025875Leucine rich repeat 4PFAMPF12799LRR_4coord: 233..273
e-value: 2.6E-7
score: 30.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8293contigM-pyrifera_M_contig8293:418..6721 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8293.19375.1mRNA_M-pyrifera_M_contig8293.19375.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8293 418..6721 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8293.19375.1 ID=prot_M-pyrifera_M_contig8293.19375.1|Name=mRNA_M-pyrifera_M_contig8293.19375.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=333bp
MDDEGEAAARIQAIHRGRLARLSLDRRRRSFVLREATARWEREQAVIKIQ
AACRGTRGRAETAHYREQQAAASKIQARIRGDKARKDVCRTAPRGLPLDR
ADIKKGLHTLGRSLHDMRQCYVGLMAANAGVSNIDAIVDFPLLQTADLSG
NCISSAKPLSSLPFLHDLDISHNCLTSVLDYELFEGEDFSWKATEDWLHD
WRSDVVRSSSMLHRANLSYNSIETMTDMAHHRNLQELDLSHNALEVLQGL
SSLKYLRILKMDHNKIRRITGLDGLPLVELHLDHNSIRKVENVGHGKLPN
LRVLQLGYNKLQNLSNLKDSLSLATLDVRFNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR000048IQ_motif_EF-hand-BS
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR025875Leu-rich_rpt_4
IPR027417P-loop_NTPase