prot_M-pyrifera_M_contig82516.19284.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig82516.19284.1
Unique Nameprot_M-pyrifera_M_contig82516.19284.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length78
Homology
BLAST of mRNA_M-pyrifera_M_contig82516.19284.1 vs. uniprot
Match: D8LSC2_ECTSI (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC2_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 1.350e-38
Identity = 69/77 (89.61%), Postives = 72/77 (93.51%), Query Frame = 0
Query:    2 GLEERPLSQALRAFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEAVHGLVSREDSGYADRSFLLHTPEQV 78
            GL+ER LS  LR+FYSSLFTLVMPDFERLRRPGTRADARRSTA+LVAEAHE VH LVSREDSGYADRSFLLHTPEQV
Sbjct:  283 GLQERSLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAHETVHRLVSREDSGYADRSFLLHTPEQV 359          
BLAST of mRNA_M-pyrifera_M_contig82516.19284.1 vs. uniprot
Match: A0A836CBI3_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI3_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 4.970e-14
Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    2 GLEERPLSQALRAFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEAVHGLVSREDSGYADR-SFLLHTPEQV 78
            GLE   ++ A+ AFYS+LF+L MP+ ER+R P  +  AR+ ++  +A+AH  +HG++S   +GY D  SFL HTP+QV
Sbjct:  588 GLEAHTVASAMAAFYSALFSLTMPELERVRAPLVKGRARQLSSRQIADAHAHLHGVLSAPAAGYRDAASFLSHTPDQV 665          
BLAST of mRNA_M-pyrifera_M_contig82516.19284.1 vs. uniprot
Match: A0A7S2S2C7_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2C7_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 7.340e-12
Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 0
Query:    2 GLEERPLSQALRAFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEAVHGLVSREDSGYADRSFLLHTPEQV 78
            GL+   + +A+  FYS++F L +P FERL     R  AR+  A  +A AH++V+ LV    + Y D SFL HTPEQV
Sbjct:  646 GLDAASVERAMLDFYSTIFALAVPSFERLAPLEVREAARKGVAERIANAHQSVYNLVKDPANKYGDSSFLQHTPEQV 722          
BLAST of mRNA_M-pyrifera_M_contig82516.19284.1 vs. uniprot
Match: A0A7S2SLV6_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SLV6_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 3.480e-11
Identity = 37/81 (45.68%), Postives = 51/81 (62.96%), Query Frame = 0
Query:    2 GLEERPLSQALRAFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEAVHGLV-SREDSGYADRSF---LLHTPEQV 78
            G++   L  AL +FY SLF+LVMP+F+RL  P  RA AR +TA  +A ++EA +  V  +E SG  + S    LLH P+QV
Sbjct:  555 GMDIESLRSALDSFYKSLFSLVMPEFDRLTSPRLRASARNATAQTIANSYEAFYNAVMDKERSGIDEASLKGILLHNPQQV 635          
BLAST of mRNA_M-pyrifera_M_contig82516.19284.1 vs. uniprot
Match: A0A7R9UAD7_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAD7_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.590e-10
Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   14 AFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEAVHGLVSREDSGYADRSFLLHTPEQV 78
            AF  +LFT+ +PDFER+  P  +  AR  T   VA+ +  +  +V  E  GYADRSFL+H PEQV
Sbjct:  343 AFNGALFTIFVPDFERITDPDEKNTARVDTMTKVADGYATIWEMVMDEKQGYADRSFLVHAPEQV 407          
BLAST of mRNA_M-pyrifera_M_contig82516.19284.1 vs. uniprot
Match: A0A7S3LLI7_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LLI7_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.080e-10
Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = 0
Query:    2 GLEERPLSQALRAFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEAVHGLVSREDSGYADRSF---LLHTPEQV 78
            G++   L  A   FY S+F++VMP+F+RL  P  R  AR STA  +A  +  ++  +S  +SGY+       L+H PEQV
Sbjct:  333 GMDPASLQAAFSKFYQSMFSMVMPEFDRLNNPRLRTTARNSTARSIAMGYVRLYNALSNPESGYSKEELERILVHAPEQV 412          
BLAST of mRNA_M-pyrifera_M_contig82516.19284.1 vs. uniprot
Match: A0A2R5GVE9_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVE9_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.170e-7
Identity = 33/81 (40.74%), Postives = 46/81 (56.79%), Query Frame = 0
Query:    2 GLEERPLSQALRAFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEAVHG-LVSREDSGYADR---SFLLHTPEQV 78
            G+    L + L +FY S+F+LVMP+F+RL  P  RA AR +TA  +A  +E  +  L     SGY      + LLH P+QV
Sbjct:  601 GMTLDALREVLDSFYKSMFSLVMPEFDRLSSPRLRASARNATAGAIAATYEQFYATLQDLSRSGYQPAQLSNILLHDPQQV 681          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82516.19284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LSC2_ECTSI1.350e-3889.61Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A836CBI3_9STRA4.970e-1446.15Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A7S2S2C7_9STRA7.340e-1244.16Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A7S2SLV6_9STRA3.480e-1145.68Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A7R9UAD7_9STRA1.590e-1047.69Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A7S3LLI7_9STRA4.080e-1038.75Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A2R5GVE9_9STRA1.170e-740.74Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82516contigM-pyrifera_M_contig82516:201..434 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82516.19284.1mRNA_M-pyrifera_M_contig82516.19284.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig82516 201..434 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig82516.19284.1 ID=prot_M-pyrifera_M_contig82516.19284.1|Name=mRNA_M-pyrifera_M_contig82516.19284.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp
SGLEERPLSQALRAFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEA
HEAVHGLVSREDSGYADRSFLLHTPEQV
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