prot_M-pyrifera_M_contig82471.19279.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig82471.19279.1
Unique Name	prot_M-pyrifera_M_contig82471.19279.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	67

Homology

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BLAST of mRNA_M-pyrifera_M_contig82471.19279.1 vs. uniprot
Match: A0A2E7KGV7_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KGV7_9PLAN)

HSP 1 Score: 131 bits (330), Expect = 6.360e-39
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0

Query:    1 MLLLSGLRQQMKKHKDDLLVIVGGAGLFMFGFLDEGLAWFFKSSGVLMFLWGCATLYVNLKSSEQQ 66
            MLLLSGLRQQMKKHKDDLLVIVGGAGLF+FGFLDEGLAWFFKSSGVLMFLWGCATLYVNLKSSEQQ
Sbjct:    1 MLLLSGLRQQMKKHKDDLLVIVGGAGLFIFGFLDEGLAWFFKSSGVLMFLWGCATLYVNLKSSEQQ 66

[Close]

BLAST of mRNA_M-pyrifera_M_contig82471.19279.1 vs. uniprot
Match: A0A518A7B5_9PLAN (Uncharacterized protein n=6 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A7B5_9PLAN)

HSP 1 Score: 112 bits (279), Expect = 6.040e-31
Identity = 53/66 (80.30%), Postives = 60/66 (90.91%), Query Frame = 0

Query:    1 MLLLSGLRQQMKKHKDDLLVIVGGAGLFMFGFLDEGLAWFFKSSGVLMFLWGCATLYVNLKSSEQQ 66
            MLL +GLRQQMKKHK+DLLVIVGGAGLF+FGFLD GL W F++SGVL+FLWGCATLYVN+KS E Q
Sbjct:   17 MLLKTGLRQQMKKHKEDLLVIVGGAGLFLFGFLDPGLGWLFQASGVLLFLWGCATLYVNVKSEEPQ 82

[Close]

BLAST of mRNA_M-pyrifera_M_contig82471.19279.1 vs. uniprot
Match: A0A355GJ53_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355GJ53_9PLAN)

HSP 1 Score: 68.6 bits (166), Expect = 7.950e-14
Identity = 32/62 (51.61%), Postives = 46/62 (74.19%), Query Frame = 0

Query:    3 LLSGLRQQMKKHKDDLLVIVGGAGLFMFGFLDEGLAWFFKSSGVLMFLWGCATLYVNLKSSE 64
            +L+ L+  +KK+KDDL VIV GAG+  F  LD  L WF+ S+G ++ +WG ATL++NL+SSE
Sbjct:    1 MLTYLKLFIKKYKDDLFVIVAGAGMLYFATLDRELGWFWNSAGFVILIWGIATLWMNLRSSE 62

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig82471.19279.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig82471.19279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A2E7KGV7_9PLAN	6.360e-39	98.48	Uncharacterized protein n=5 Tax=Gimesia TaxID=1649...	[more]
A0A518A7B5_9PLAN	6.040e-31	80.30	Uncharacterized protein n=6 Tax=Gimesia panareensi...	[more]
A0A355GJ53_9PLAN	7.950e-14	51.61	Uncharacterized protein n=2 Tax=Planctomycetaceae ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 17..33
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 39..60
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 34..38
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..16
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 61..66
None	No IPR available	TMHMM	TMhelix		coord: 19..41

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig82471	contig	M-pyrifera_M_contig82471:398..598 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig82471.19279.1	mRNA_M-pyrifera_M_contig82471.19279.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig82471 398..598 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig82471.19279.1 ID=prot_M-pyrifera_M_contig82471.19279.1|Name=mRNA_M-pyrifera_M_contig82471.19279.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=67bp
MLLLSGLRQQMKKHKDDLLVIVGGAGLFMFGFLDEGLAWFFKSSGVLMFL
WGCATLYVNLKSSEQQ*