prot_M-pyrifera_M_contig8245.19275.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8245.19275.1
Unique Nameprot_M-pyrifera_M_contig8245.19275.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length291
Homology
BLAST of mRNA_M-pyrifera_M_contig8245.19275.1 vs. uniprot
Match: D8LR75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR75_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 5.880e-81
Identity = 180/298 (60.40%), Postives = 207/298 (69.46%), Query Frame = 0
Query:    1 SWSNLCVSRWRLCPEERHAEVWR--DD-----KALHEARALVSPPAPPPSWRQIYGRLHEELRVPKGAFSSSHMVIGKSCQKGLAVWIALSRRSNGMTGRSMMGNGSTGLRTTEVIGLRAVVQRVEEGPAARLHPGGFTVRRVKGLRACLLANAHGGCSRYSGGXXXXXXIGPYSSAVTTTAVFPSLPLVDERTWPRYTVNKGAAGGXXXXXXXXXXXXXXXXHHGSMGTGSGSGPWQICSRSAMAATAATPPPPLALNEFASVDFFIETPGCHTEADFLRLEACVDIRFSDARARSA 291
            +WS LCVSRWRL PE+RHAEVWR  DD     K    AR+ VSPPAPPP+W+ IYGRLH ++  P G F  SHMVIG+S Q+G+AVWIAL+RRSNGMTGRS+M  GSTGLRTTEVI LRAVVQRVEEGPA R+HP  F VRRV GLRA L  N H      SG XXXXXX             FP +   ++R  P++T+N+GAA  XXXXXXXXXXXXXXXX     G G  S  W   + +A A+ AA   PPLAL E+A+VDFFIE  GC TEADFLRLEACVD+  S A A +A
Sbjct:  386 NWSTLCVSRWRLGPEQRHAEVWRVPDDADGKGKXXXVARSAVSPPAPPPTWQSIYGRLHGDVHAPSGTFCPSHMVIGRSVQEGVAVWIALTRRSNGMTGRSVMTQGSTGLRTTEVIELRAVVQRVEEGPAVRVHPHAFKVRRVSGLRALL--NDH------SGXXXXXXXXXXXXXXXXXXGFFPPVSQGEDRFSPKFTINRGAAESXXXXXXXXXXXXXXXXXXRGAGAGVRSS-WSGTA-AATASPAAEATPPLALYEYAAVDFFIEAAGCPTEADFLRLEACVDVAVSGATASAA 673          
BLAST of mRNA_M-pyrifera_M_contig8245.19275.1 vs. uniprot
Match: A0A6H5JYB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB8_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 1.030e-76
Identity = 171/302 (56.62%), Postives = 200/302 (66.23%), Query Frame = 0
Query:    1 SWSNLCVSRWRLCPEERHAEVWR--DDK---------ALHEARALVSPPAPPPSWRQIYGRLHEELRVPKGAFSSSHMVIGKSCQKGLAVWIALSRRSNGMTGRSMMGNGSTGLRTTEVIGLRAVVQRVEEGPAARLHPGGFTVRRVKGLRACLLANAHGGCSRYSGGXXXXXXIGPYSSAVTTTAVFPSLPLVDERTWPRYTVNKGAAGGXXXXXXXXXXXXXXXXHHGSMGTGSGSGPWQICSRSAMAATAATPPPPLALNEFASVDFFIETPGCHTEADFLRLEACVDIRFSDARARSA 291
            +WS LCVSRWRL PE+RHAEVWR  DD              AR+++SPPAPPP+W+ IYGRLH ++  P G F  SHMVIG+S Q+G+AVWIAL+RRSNGMTGRS+M  GSTGLRTTEVI LRAVVQRVEEGPA R+HP  F VRRV GLRA L  ++ G        XXXXXX             FP +    +R  P++T+N+GA   XXXXXXXXXXXXXXXX             W   + +A A+ AA   PPLAL E+A VDFFIE  GC TEADFLRLEACVD+  S A A +A
Sbjct:  241 NWSTLCVSRWRLGPEQRHAEVWRVPDDADGTGKXXXXXKGVARSVLSPPAPPPTWQSIYGRLHRDVHAPSGTFCPSHMVIGRSVQEGVAVWIALNRRSNGMTGRSVMTQGSTGLRTTEVIELRAVVQRVEEGPAVRVHPHAFKVRRVSGLRALLKDHSDGXXXXXX--XXXXXXXXXXXXXXXXXGFFPPVSQGKDRFSPKFTINRGAVESXXXXXXXXXXXXXXXXXXXXXXGAGVRSSWSGTAAAA-ASLAAEATPPLALYEYAVVDFFIEAAGCPTEADFLRLEACVDVAVSGAAASAA 539          
BLAST of mRNA_M-pyrifera_M_contig8245.19275.1 vs. uniprot
Match: A0A835YLV5_9STRA (BHLH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV5_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.090e-10
Identity = 53/144 (36.81%), Postives = 69/144 (47.92%), Query Frame = 0
Query:    3 SNLCVSRWRLC-PEERHAEVWRDDKALH--------EARALVSPPAPPPSWRQIYGRLHEELRVPKGAFSSSHM----------------VIGKSCQKGLAVWIALSRRSNGMTGRSMMGNGSTGLRTTEVIGLRAVVQRVEEG 121
            SN    R R C PE R   + R  +  H        +  AL +PP    SWR++Y  LH ELR+P GA   S                  VIG++   G  VW+AL RRSNGMT RS++   S  +R  EV+ LR V+Q +  G
Sbjct:  358 SNAQRLRRRDCAPETRAGALLRAGERCHAQLEQYYRDPEALAAPPV---SWREVYCALHRELRLPDGALCVSAAAXXXXXAPHALGRGEDVIGRAAGGGACVWVALCRRSNGMTARSVV-TPSGAMRAAEVVELRIVLQNIGVG 497          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8245.19275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LR75_ECTSI5.880e-8160.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYB8_9PHAE1.030e-7656.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLV5_9STRA1.090e-1036.81BHLH domain-containing protein n=1 Tax=Tribonema m... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8245contigM-pyrifera_M_contig8245:9103..11972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8245.19275.1mRNA_M-pyrifera_M_contig8245.19275.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8245 9103..11972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8245.19275.1 ID=prot_M-pyrifera_M_contig8245.19275.1|Name=mRNA_M-pyrifera_M_contig8245.19275.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=291bp
SWSNLCVSRWRLCPEERHAEVWRDDKALHEARALVSPPAPPPSWRQIYGR
LHEELRVPKGAFSSSHMVIGKSCQKGLAVWIALSRRSNGMTGRSMMGNGS
TGLRTTEVIGLRAVVQRVEEGPAARLHPGGFTVRRVKGLRACLLANAHGG
CSRYSGGGGGGGGIGPYSSAVTTTAVFPSLPLVDERTWPRYTVNKGAAGG
GSGTGSGGGGVVAPPPHHGSMGTGSGSGPWQICSRSAMAATAATPPPPLA
LNEFASVDFFIETPGCHTEADFLRLEACVDIRFSDARARSA
back to top