prot_M-pyrifera_M_contig8233.19255.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8233.19255.1
Unique Nameprot_M-pyrifera_M_contig8233.19255.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length286
Homology
BLAST of mRNA_M-pyrifera_M_contig8233.19255.1 vs. uniprot
Match: A0A6H5KTW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTW1_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 1.570e-42
Identity = 180/313 (57.51%), Postives = 203/313 (64.86%), Query Frame = 0
Query:    1 YLCCDLTCLTNPVAGCGMFGLPLVCKACYNGDGTPEFDADP-----EAPAAAPTPXXXXXXVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIVERTPGTPSXXXXXXXXXXXVEIV--CTACDAADKVLTTEDLVAMENDGLELVCDSECFVDAELEGCGAFGLEVECRVVDIPKTGGGGDNGEGGN-DDQIGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------CSTEEEAICADISAAQKEALANYDNGGKVIVCDPTCEAADGDPTHCN 286
            YLCCDLTC   PVAGCG+FGLPLVCKACY+GDGTP +D DP       P+  P P XXXXX  XXXXXXX          XXXXXX        XXXXXXX         P+    XXXXXXX      C+ C+ A ++LT ED +A+ENDGLELVCD +C+ ++ L+GCGAFGL+ ECR V+I    G G    GG    + G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   C+  E A+CADIS AQ+EALA YD GGKVIVCDPTC    GD +HCN
Sbjct:   46 YLCCDLTCAQTPVAGCGIFGLPLVCKACYDGDGTPAYDDDPVDGDGTTPSTTPAPAXXXXXXXXXXXXXXVMPVAAPTPEXXXXXXTLEPVMPVXXXXXXXXXXXXXXAGPTSEPEXXXXXXXXYDFDDCSPCEEATEILTMEDWIALENDGLELVCDPDCYENSMLDGCGAFGLDTECRTVEIDDGEGEGGXXXGGTTSSETGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGGGDTTSGSCTDAEIAMCADISPAQEEALAMYDGGGKVIVCDPTCLG--GDISHCN 356          
BLAST of mRNA_M-pyrifera_M_contig8233.19255.1 vs. uniprot
Match: D7G4W7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W7_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 6.480e-30
Identity = 179/378 (47.35%), Postives = 203/378 (53.70%), Query Frame = 0
Query:    1 YLCCDLTCLTNPVAGCGMFGLPLVCKACYNGDGTPEFDADPEA------------------------PAAAPTPXXXXXXVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIVERTPGTPSXXXXXXXXXXXVEIVCTACDAADKVLTTEDLVAMENDGLELVCDSECFVDAELEGCGAFGLEVECRVVDIPKTGGGGDNGEGG--------NDDQIGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------------------CSTEEEAICADISAAQKEALANYDNGGKVIVCDPTCEAADGDPTHCN 286
            YLCCDLTC   PVAGCG+FGL +VCKACY+GDGTP +D DP                          P  APTPXXXXXX  X      XXXXXXXXXXXXX                          TP XXXXXXXXXXX    C+ C+ A ++LT ED +A+ENDGLELVCD +C+ ++ L+GCGAFGL++ECR V+I       D+GEG            + G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                            C+  E A+CADIS AQ+EALA YD GGKVIVCDPTC   D   +HCN
Sbjct:   46 YLCCDLTCAETPVAGCGIFGLDVVCKACYDGDGTPAYD-DPXXXXXXXXXXXXXXXXXXXXXXXXVMPVTAPTPXXXXXXXXXEPVMPVXXXXXXXXXXXXXVAGP----------------------TPEXXXXXXXXXXXDFDDCSPCEEATEMLTMEDWIALENDGLELVCDPDCYENSMLDGCGAFGLDIECRAVEI-------DDGEGXXXXXXXXTTSSETGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCTEAEIAMCADISPAQEEALAMYDGGGKVIVCDPTCLGED--ISHCN 391          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8233.19255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTW1_9PHAE1.570e-4257.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4W7_ECTSI6.480e-3047.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8233contigM-pyrifera_M_contig8233:3682..4929 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8233.19255.1mRNA_M-pyrifera_M_contig8233.19255.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8233 3682..4929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8233.19255.1 ID=prot_M-pyrifera_M_contig8233.19255.1|Name=mRNA_M-pyrifera_M_contig8233.19255.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=286bp
YLCCDLTCLTNPVAGCGMFGLPLVCKACYNGDGTPEFDADPEAPAAAPTP
APTPAPVRAPTPAPVRAPTPAPVRAPTPAPVKAPTPAPVRAPTPAPVIVE
RTPGTPSPEVVNKGTPAPVEIVCTACDAADKVLTTEDLVAMENDGLELVC
DSECFVDAELEGCGAFGLEVECRVVDIPKTGGGGDNGEGGNDDQIGTGEG
EGEGEGGGGGSGSGGGSGSNSDENGDGSGNGSGGGGGGSCSTEEEAICAD
ISAAQKEALANYDNGGKVIVCDPTCEAADGDPTHCN
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