prot_M-pyrifera_M_contig82262.19241.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig82262.19241.1
Unique Nameprot_M-pyrifera_M_contig82262.19241.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length59
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82262.19241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainPFAMPF00168C2coord: 2..55
e-value: 1.4E-10
score: 41.4
IPR000008C2 domainPROSITEPS50004C2coord: 1..47
score: 9.864
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 1..59
e-value: 2.8E-12
score: 48.4
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 1..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82262contigM-pyrifera_M_contig82262:88..264 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82262.19241.1mRNA_M-pyrifera_M_contig82262.19241.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig82262 88..264 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig82262.19241.1 ID=prot_M-pyrifera_M_contig82262.19241.1|Name=mRNA_M-pyrifera_M_contig82262.19241.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=59bp
VARQSLNPVWGYSTRFEVESSLLEASLQVTVLDKDKYTADDTIGSATVHL
ESLAGSSSP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf