prot_M-pyrifera_M_contig82243.19235.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig82243.19235.1
Unique Nameprot_M-pyrifera_M_contig82243.19235.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length236
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82243.19235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 64..153
e-value: 4.9E-7
score: 32.2
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 6..18
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 1..28
score: 10.58
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 186..223
score: 8.851
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 3..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82243contigM-pyrifera_M_contig82243:14..796 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82243.19235.1mRNA_M-pyrifera_M_contig82243.19235.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig82243 14..796 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig82243.19235.1 ID=prot_M-pyrifera_M_contig82243.19235.1|Name=mRNA_M-pyrifera_M_contig82243.19235.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp
ALRAVDRNGDGLLSRKDLAEGLSLAGAFLALPEVGLLVRAFAPSPDATRG
TLAVVERGFVPAEALLDALRAGEAVGEAVSFDRMVASMALEKHPDVRKGL
RTASDLAALLRRELADSEGLVTREAFEAYWKDVSVLDPSDASFVETLCGV
HGVEEHPPSSAVAKSVGAIEALLREAARKRAHGTETERSALARLFRAFDA
RGDGDGLMDMDEFAAACEHMAVPVPDGVRNAVFLAH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair