prot_M-pyrifera_M_contig82240.19233.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig82240.19233.1
Unique Nameprot_M-pyrifera_M_contig82240.19233.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length112
Homology
BLAST of mRNA_M-pyrifera_M_contig82240.19233.1 vs. uniprot
Match: A0A1R2ANM7_9CILI (RING-type domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2ANM7_9CILI)

HSP 1 Score: 85.5 bits (210), Expect = 3.310e-17
Identity = 39/96 (40.62%), Postives = 45/96 (46.88%), Query Frame = 0
Query:   10 PRAKCPACRQEFCFFCLQEWHGVQKTCQEFAEELEKRMDGKLNETLAMNEWFATGCVKKCPGCLTPTMKNGGCRHMTCKACAFEYCWVCLDVWRPN 105
            P   CP C  E CF C + WH   KTC E              + +    W     VK CP C     KN GC HMTC  C +E+CW+CLDVWR N
Sbjct:  230 PHIICPECNFEICFLCGKAWHD-DKTCDEI-------------QKIEYEIWAQDKDVKDCPNCKYKIEKNKGCDHMTCVICNYEFCWICLDVWRDN 311          
BLAST of mRNA_M-pyrifera_M_contig82240.19233.1 vs. uniprot
Match: L8GRR7_ACACA (IBR domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRR7_ACACA)

HSP 1 Score: 79.0 bits (193), Expect = 8.060e-15
Identity = 35/91 (38.46%), Postives = 47/91 (51.65%), Query Frame = 0
Query:   17 CRQEFCFFCLQEWHGVQKTCQEFAE--ELEKRMDGKLNETLAMNEWFATGCVKKCPGCLTPTMKNGGCRHMTCKACAFEYCWVCLDVWRPN 105
            CR  FC+ C +EWH    TC+++ +        D K +E +  N        K CP C  P  KNGGC HMTCK C +E+CW+C   +  N
Sbjct:  514 CRFSFCYKCKEEWHA-DATCEQYQQWRRENSEADAKYDEWVKAN-------AKMCPNCQAPIEKNGGCNHMTCKNCKYEFCWLCNAQYNKN 596          
BLAST of mRNA_M-pyrifera_M_contig82240.19233.1 vs. uniprot
Match: A0A6B2L571_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L571_9EUKA)

HSP 1 Score: 77.4 bits (189), Expect = 2.310e-14
Identity = 36/103 (34.95%), Postives = 52/103 (50.49%), Query Frame = 0
Query:    7 PLQPRAKCPACRQEFCFFCLQEWHGVQKTCQEFA--EELEKRMDGKLNETLAMNEWFATGCVKKCPGCLTPTMKNGGCRHMTCKACAFEYCWVCLDVWRPNSH 107
            P   +  C  C  +FCF C +E+HG  K+C+EF   +    R+D +      +N        K CP C  P  K+GGC HM C++C FE+CW CL  +    +
Sbjct:  202 PTSLKMVCGQCNYQFCFDCKEEFHGT-KSCEEFRVWKLASSRVDIRFYLWQKLN-------TKPCPSCKAPIQKHGGCNHMVCESCKFEFCWQCLKEYESGHY 296          
BLAST of mRNA_M-pyrifera_M_contig82240.19233.1 vs. uniprot
Match: A0A7I8VLE1_9ANNE (RBR-type E3 ubiquitin transferase n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VLE1_9ANNE)

HSP 1 Score: 77.0 bits (188), Expect = 3.700e-14
Identity = 33/89 (37.08%), Postives = 45/89 (50.56%), Query Frame = 0
Query:   17 CRQEFCFFCLQEWHGVQKTCQEFAEELEKRMDGKLNETLAMNEWFATGCVKKCPGCLTPTMKNGGCRHMTCKACAFEYCWVCLDVWRPN 105
            C   FCF C Q WH   K        + ++   K ++    + W A    K+CP C +   K+GGC HM CK C F++CWVCL  W P+
Sbjct:  247 CGHTFCFACGQNWHDPVKC------SILRKWIKKCDDDSETSNWIAAN-TKECPKCRSIIEKDGGCNHMVCKKCRFDFCWVCLGPWEPH 328          
BLAST of mRNA_M-pyrifera_M_contig82240.19233.1 vs. uniprot
Match: G0MMJ1_CAEBE (RBR-type E3 ubiquitin transferase n=1 Tax=Caenorhabditis brenneri TaxID=135651 RepID=G0MMJ1_CAEBE)

HSP 1 Score: 76.6 bits (187), Expect = 5.180e-14
Identity = 35/91 (38.46%), Postives = 47/91 (51.65%), Query Frame = 0
Query:   16 ACRQEFCFFCLQEWHGVQKTCQEFAEELEKRMDGKLNETLAMNEWFATGCVKKCPGCLTPTMKNGGCRHMTCKACAFEYCWVCLDVWRPNS 106
            +C   FCF C  + H    TC +     ++RMD   + +     W  +   + CP C  PT KNGGC HM C  C +EYCWVCL  W+ +S
Sbjct:  193 SCGSTFCFLCKSDAH-YPATCLQIRLWEKQRMDFGQHTS----SWILSN-TRDCPRCFAPTQKNGGCNHMRCTGCRYEYCWVCLRNWKTHS 277          
BLAST of mRNA_M-pyrifera_M_contig82240.19233.1 vs. uniprot
Match: A0A1D1VGF5_RAMVA (RBR-type E3 ubiquitin transferase n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1VGF5_RAMVA)

HSP 1 Score: 76.3 bits (186), Expect = 6.950e-14
Identity = 34/102 (33.33%), Postives = 52/102 (50.98%), Query Frame = 0
Query:    4 TAGPLQPRAKCPACRQEFCFFCLQEWHGVQKTCQEFAEELEKRMDGKLNETLAMNEWFATGCVKKCPGCLTPTMKNGGCRHMTCKACAFEYCWVCLDVWRPN 105
            ++ P   R  C  C+  FCF C  E+H +   C+   +  +K MD       A    + +   K CP C +   KNGGC H+ C+ C +E+CWVCL+ W+ +
Sbjct:  226 SSQPDSKRVVCDKCQSSFCFVCGSEYH-LPCCCRTIRQWWKKVMDD------ADTSSYISSHTKDCPNCESSIEKNGGCNHLICRQCKYEFCWVCLEDWKSH 320          
BLAST of mRNA_M-pyrifera_M_contig82240.19233.1 vs. uniprot
Match: D3BV70_POLPP (RBR-type E3 ubiquitin transferase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BV70_POLPP)

HSP 1 Score: 76.3 bits (186), Expect = 7.320e-14
Identity = 33/91 (36.26%), Postives = 49/91 (53.85%), Query Frame = 0
Query:   16 ACRQEFCFFCLQEWHGVQKTCQEFAEELEKRMDGKLNETLAMNEWFATGCVKKCPGCLTPTMKNGGCRHMTCKACAFEYCWVCLDVWRPNS 106
            +C ++FCF C +E H    TC++ A       + K  +    + W    C K+CP C     KNGGC HM C+ C +E+CWVCL  W+ ++
Sbjct:  581 SCGRKFCFKCHRESHAPA-TCEQMAH-----WETKCQDESETSHWKVVNC-KQCPKCSVSVEKNGGCNHMNCRQCQYEWCWVCLRSWKGHN 664          
BLAST of mRNA_M-pyrifera_M_contig82240.19233.1 vs. uniprot
Match: A0A6B2LFL4_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LFL4_9EUKA)

HSP 1 Score: 73.9 bits (180), Expect = 7.690e-14
Identity = 34/99 (34.34%), Postives = 48/99 (48.48%), Query Frame = 0
Query:    1 MVATAGPLQPRAKCPACRQEFCFFCLQEWHGVQKTCQEFAEELEKRMDGKLNETLAMNEWFATGCVKKCPGCLTPTMKNGGCRHMTCKACAFEYCWVCL 99
            M+     L  R   P+C   FCF C +EWH    TC ++ +  +    G     L + +       K CP C     KNGGC HMTC+ C +E+CW+C+
Sbjct:  101 MIGGKKTLMMRCTNPSCLFCFCFNCKEEWHA-DATCTQYQQWKKDNASGTDRAKLWIQQH-----TKACPSCHVAIEKNGGCNHMTCRGCHYEFCWICM 193          
BLAST of mRNA_M-pyrifera_M_contig82240.19233.1 vs. uniprot
Match: A0A4Z2CVT8_SCHJA (RBR-type E3 ubiquitin transferase n=1 Tax=Schistosoma japonicum TaxID=6182 RepID=A0A4Z2CVT8_SCHJA)

HSP 1 Score: 75.9 bits (185), Expect = 8.820e-14
Identity = 40/109 (36.70%), Postives = 50/109 (45.87%), Query Frame = 0
Query:    3 ATAGPLQPRAKCPACRQEFCFFCLQEWHGVQKTCQEFAEELEKRMD--GKLNETLAMNEWFATGCVKKCPGCLTPTMKNGGCRHMTCKACAFEYCWVCLDVWRPNSHTA 109
            A   P   R +C  C  EFCF C + +H    +C    + L K  D  G  N        + T   K CP C     KN GC HM C  C +E+CWVCL +W+  SH A
Sbjct:  183 ALEEPKARRVQCERCHAEFCFMCSEAYHAPT-SCATLKQWLVKCRDDSGTAN--------YMTAHTKDCPSCHVCIEKNEGCNHMKCSLCHYEFCWVCLGIWK--SHDA 280          
BLAST of mRNA_M-pyrifera_M_contig82240.19233.1 vs. uniprot
Match: A0A2B4T1R3_STYPI (E3 ubiquitin-protein ligase parkin n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4T1R3_STYPI)

HSP 1 Score: 75.9 bits (185), Expect = 9.110e-14
Identity = 42/109 (38.53%), Postives = 52/109 (47.71%), Query Frame = 0
Query:    7 PLQPRAKCPACRQEFCFFC---LQEWHGVQKTCQEFAEELEKRMDGKLN-ETLAMNEWFATG------CVKKCPGCLTPTMKNGGCRHMTCKACAFEYCWVCLDVWRPN 105
            P   R KC  C+ EFC  C    Q  H   ++    A    +  + ++N E      W A          KKCPGC T T KNGGC HMTC  C FE+CW+CL  W P+
Sbjct:  345 PNMRRIKCEHCQFEFCRECKEPFQRGHSCNQSNPN-ATTNARASNYQVNLENARRARWEAEARQVIEQISKKCPGCKTNTEKNGGCNHMTCSRCRFEWCWICLIRWNPD 452          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82240.19233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1R2ANM7_9CILI3.310e-1740.63RING-type domain-containing protein n=1 Tax=Stento... [more]
L8GRR7_ACACA8.060e-1538.46IBR domain containing protein n=1 Tax=Acanthamoeba... [more]
A0A6B2L571_9EUKA2.310e-1434.95Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A7I8VLE1_9ANNE3.700e-1437.08RBR-type E3 ubiquitin transferase n=1 Tax=Dimorphi... [more]
G0MMJ1_CAEBE5.180e-1438.46RBR-type E3 ubiquitin transferase n=1 Tax=Caenorha... [more]
A0A1D1VGF5_RAMVA6.950e-1433.33RBR-type E3 ubiquitin transferase n=1 Tax=Ramazzot... [more]
D3BV70_POLPP7.320e-1436.26RBR-type E3 ubiquitin transferase n=1 Tax=Polyspho... [more]
A0A6B2LFL4_9EUKA7.690e-1434.34Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A4Z2CVT8_SCHJA8.820e-1436.70RBR-type E3 ubiquitin transferase n=1 Tax=Schistos... [more]
A0A2B4T1R3_STYPI9.110e-1438.53E3 ubiquitin-protein ligase parkin n=2 Tax=Styloph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.120.1750coord: 42..112
e-value: 4.7E-15
score: 58.0
NoneNo IPR availablePANTHERPTHR11685:SF212E3 UBIQUITIN-PROTEIN LIGASE ARIH1coord: 13..102
NoneNo IPR availablePROSITEPS51873TRIADcoord: 1..112
score: 18.201
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 51..110
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 11..42
IPR002867IBR domainPFAMPF01485IBRcoord: 65..106
e-value: 2.6E-7
score: 30.8
coord: 9..36
e-value: 1.7E-6
score: 28.1
IPR031127E3 ubiquitin ligase RBR familyPANTHERPTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGcoord: 13..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82240contigM-pyrifera_M_contig82240:61..396 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82240.19233.1mRNA_M-pyrifera_M_contig82240.19233.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig82240 40..396 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig82240.19233.1 ID=prot_M-pyrifera_M_contig82240.19233.1|Name=mRNA_M-pyrifera_M_contig82240.19233.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
MVATAGPLQPRAKCPACRQEFCFFCLQEWHGVQKTCQEFAEELEKRMDGK
LNETLAMNEWFATGCVKKCPGCLTPTMKNGGCRHMTCKACAFEYCWVCLD
VWRPNSHTACEH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002867IBR_dom
IPR031127E3_UB_ligase_RBR