prot_M-pyrifera_M_contig822.19225.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig822.19225.1
Unique Nameprot_M-pyrifera_M_contig822.19225.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length97
Homology
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BLAST of mRNA_M-pyrifera_M_contig822.19225.1 vs. uniprot
Match: D8LNR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR7_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 7.200e-26
Identity = 73/106 (68.87%), Postives = 79/106 (74.53%), Query Frame = 0 
Query:    1 MRVALATARALGFASRRARRGRRPCFAEPG---APNPR-GPQA-GPRTAP---APTGRMSEEFVMSRSQLGAVAMLAIQIR-AVCS-GVDDFSLELEGEGDDDDGT 96
            MRV LATARALGF +RRARRGR PC ++ G    PN   GPQA GPRTA    A  GRM EEFVMSRSQLGA  +LA QIR AVCS G  DFSLE+EG+GDDDDGT
Sbjct:    1 MRVGLATARALGFVTRRARRGRGPC-SQSGLHRTPNAAAGPQAAGPRTASSSAASQGRMVEEFVMSRSQLGAATVLATQIRGAVCSVGGGDFSLEVEGDGDDDDGT 105
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig822.19225.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNR7_ECTSI7.200e-2668.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..96
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig822contigM-pyrifera_M_contig822:21202..24576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig822.19225.1mRNA_M-pyrifera_M_contig822.19225.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig822 21202..24576 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig822.19225.1 ID=prot_M-pyrifera_M_contig822.19225.1|Name=mRNA_M-pyrifera_M_contig822.19225.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp
MRVALATARALGFASRRARRGRRPCFAEPGAPNPRGPQAGPRTAPAPTGR
MSEEFVMSRSQLGAVAMLAIQIRAVCSGVDDFSLELEGEGDDDDGT*
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