prot_M-pyrifera_M_contig82051.19195.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig82051.19195.1
Unique Nameprot_M-pyrifera_M_contig82051.19195.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length176
Homology
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: A0A5A8DAE2_CAFRO (DNA polymerase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DAE2_CAFRO)

HSP 1 Score: 171 bits (433), Expect = 4.320e-46
Identity = 94/178 (52.81%), Postives = 119/178 (66.85%), Query Frame = 0
Query:    1 MYDGLPLASNPCEGKTVPGSPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEA-NIAEFQAALDAQLRESRTGRASFGGHSIRQHVMAVVPVEKT-NLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRFGSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLEL 176
            M DG PL S+P   KT+PGS   PVPV+RLYG T  G SV+ HVHGFTPYF+C++PP F+ A + A FQA+L+A+LR + TGR +    +I + VMAV   +   ++ G+     ATFL++YVA P LVT  RTIL  G R GS    L YQ +EA  PF LRFMIDN+I G N+LEL
Sbjct:   77 MTDGDPLPSHPDPSKTLPGSRVGPVPVLRLYGVTDGGHSVMAHVHGFTPYFFCNSPPGFDAARDCAGFQASLEARLRSAVTGRDA----AISRLVMAVQAEDGLQSIMGFHGDETATFLRVYVAAPTLVTKCRTILERGMRLGSGPE-LCYQCFEANTPFTLRFMIDNNITGSNYLEL 249          
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: A0A482RF44_9ARCH (DNA_pol_B_exo1 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RF44_9ARCH)

HSP 1 Score: 158 bits (399), Expect = 3.670e-43
Identity = 84/177 (47.46%), Postives = 109/177 (61.58%), Query Frame = 0
Query:    1 MYDGLPLASNPCEGKTVPGSPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEANIAEFQAALDAQLR--ESRTGRASFGGHSIRQHVMAVVPVEKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRFGSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLE 175
            MYDG PLA NP  G  +PG+ +  VP+IR++G T EG SV  HVHGFTPYF+ + P    E ++  F+AAL+AQLR  + R   A    H      + +VP +K +L GY  GRK + L+IY  MP +V TA+ IL  GF FG       Y  +EA  PF+LR+MIDN+I G NWLE
Sbjct:   22 MYDGEPLAKNPRSGLAMPGARSGTVPIIRVFGVTQEGHSVCMHVHGFTPYFWAAPPAGMTERDVPAFRAALEAQLRAVKERARVADAIPH------VELVP-DKQSLLGYHHGRKQSMLRIYTGMPTMVPTAKGILERGFSFGGGAGR-EYMCFEANVPFILRYMIDNNITGGNWLE 190          
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: A0A401NGF2_SCYTO (Uncharacterized protein n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401NGF2_SCYTO)

HSP 1 Score: 151 bits (382), Expect = 3.420e-40
Identity = 75/161 (46.58%), Postives = 103/161 (63.98%), Query Frame = 0
Query:   17 VPGSPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEANIAEFQAALDA-QLRESRTGRASFGGHSIRQHVMAVVPVEKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRFGSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLEL 176
            +PG+   PVPV R++G T EG SV CHVHGF PYFY  APP F   ++ +FQ  L+   +++ R+ + +     I Q V+AV    K N+YGY    K  FL+I +A+P L+  A+ +L  GFRFGS T    YQ+YEA   F +RFM+D+D+VGCNW+EL
Sbjct:  111 MPGNKQGPVPVTRMFGITMEGNSVCCHVHGFMPYFYVKAPPGFGSEHLHDFQRELNVIVIKDMRSNKGN-----IMQAVLAVDICLKENMYGYGGNTKMPFLKITMALPRLIAPAKRLLEQGFRFGS-TPVCNYQSYEANIDFEIRFMVDSDVVGCNWIEL 265          
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: UPI0009A33C64 (DNA polymerase delta catalytic subunit n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A33C64)

HSP 1 Score: 153 bits (387), Expect = 6.160e-40
Identity = 76/161 (47.20%), Postives = 103/161 (63.98%), Query Frame = 0
Query:   17 VPGSPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEANIAEFQAALDAQ-LRESRTGRASFGGHSIRQHVMAVVPVEKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRFGSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLEL 176
            +PGS   PVPV R++G T EG SV CHVHGF PYFY  APP F   ++ +FQ  L+   +++ R+ +      +I Q V+AV    K N+YGY    K  FL+I +A+P L+  A+ +L  GFRFGS T    YQ+YEA   F +RFM+D+D+VGCNW+EL
Sbjct:    6 MPGSKQGPVPVTRMFGITMEGNSVCCHVHGFMPYFYVKAPPGFGSEHLHDFQRELNTTVIKDMRSNK-----DNISQAVLAVDICMKENMYGYGGNTKTPFLKITMALPRLIAPAKRLLEQGFRFGS-TPMCNYQSYEANIDFEIRFMVDSDVVGCNWIEL 160          
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: A0A0P1AFV1_PLAHL (DNA polymerase n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AFV1_PLAHL)

HSP 1 Score: 153 bits (387), Expect = 6.650e-40
Identity = 85/181 (46.96%), Postives = 107/181 (59.12%), Query Frame = 0
Query:    1 MYDGLPLASNPCEGKTVPG-----SPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEANIAEFQAALDAQLRESRTGRASFGGHSIRQHVMAVVPVEKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRF-GSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLE 175
            MYDG PL +NP +G  VPG       N    +IRL+G T EG SVL HVHG  PYFY S P +FNE+   E + ALDA + +    R    G + R   + VV  +K ++YGYQF RK T  +IY++MPN V   R+ L  G    G   R   YQTYE+  PF+LRFMID +I GCNW+E
Sbjct:   74 MYDGPPLKTNPKKGSVVPGVSASGDSNQNAAIIRLFGVTIEGHSVLMHVHGVLPYFYASCPENFNESKCGEVRLALDAAVSQ----RDRDSGSTARVVGVQVVR-DKMSIYGYQFDRKTTLFKIYLSMPNYVPKLRSALEGGLTLPGCDFRN--YQTYESNVPFILRFMIDEEISGCNWVE 247          
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: A0A401SLN7_CHIPU (DNA polymerase n=8 Tax=Galeoidea TaxID=119195 RepID=A0A401SLN7_CHIPU)

HSP 1 Score: 152 bits (385), Expect = 1.240e-39
Identity = 76/161 (47.20%), Postives = 103/161 (63.98%), Query Frame = 0
Query:   17 VPGSPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEANIAEFQAALDA-QLRESRTGRASFGGHSIRQHVMAVVPVEKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRFGSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLEL 176
            +PGS   PVPV R++G T EG SV CHVHGF PYFY  APP F   ++ +FQ  L+   +++ R+ +      +I Q V+AV    K N+YGY    K  FL+I +A+P L+  A+ +L  GFRFGS T    YQ+YEA   F +RFM+D+D+VGCNW+EL
Sbjct:  111 MPGSKQGPVPVTRMFGITMEGNSVCCHVHGFMPYFYVKAPPGFGSEHLHDFQRELNTIVIKDMRSNK-----DNISQAVLAVDICMKENMYGYGGNTKTPFLKITMALPRLIAPAKRLLEQGFRFGS-TPMSNYQSYEANIDFEIRFMVDSDVVGCNWIEL 265          
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: A0A421FHY3_9STRA (DNA polymerase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FHY3_9STRA)

HSP 1 Score: 150 bits (379), Expect = 7.920e-39
Identity = 83/191 (43.46%), Postives = 106/191 (55.50%), Query Frame = 0
Query:    1 MYDGLPLASNPCEGKTVPGSPNAP-------------VPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEANIAEFQAALDAQLRESRTGRASFGGHSIRQHVMAVVPV--EKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRF-GSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLE 175
            MYDG PL  NP +G  VPG  +A                +IRLYG T EG SVL HVHG  PYFYC+ P  F+E    E + ALDA + +   G     GHS     +  V V  +K ++YGYQF +  T  ++Y++MPN V   R+ L  G    G   R  +YQTYE+  PF+LRFMID +I GCNW+E
Sbjct:   76 MYDGPPLQQNPKKGDKVPGLSSASPSNGASSSGGHQSAAIIRLYGVTMEGHSVLMHVHGVLPYFYCACPDQFDEKRCGEVREALDAAVAQRERG-----GHSSNASRVVGVQVVRDKMSIYGYQFDKVTTLWKVYLSMPNYVPKLRSALEGGLTLPGCDFR--SYQTYESNVPFILRFMIDEEIQGCNWVE 259          
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: H3GAM4_PHYRM (DNA polymerase n=3 Tax=Phytophthora TaxID=4783 RepID=H3GAM4_PHYRM)

HSP 1 Score: 150 bits (379), Expect = 7.970e-39
Identity = 80/181 (44.20%), Postives = 108/181 (59.67%), Query Frame = 0
Query:    1 MYDGLPLASNPCEGKTVPG-----SPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEANIAEFQAALDAQLRESRTGRASFGGHSIRQHVMAVVPVEKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRF-GSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLE 175
            MYDG PL  NP +G  VPG            +IRLYG + +G SVL HVHG  PYFYC+ P DF+E    + +AALDA +  ++  R S G   +   V   V  ++ ++YGYQF R  T  +++++MP+ V   R+ L AG    G + R  +YQTYE+  PF+LRFMID DI GCNW+E
Sbjct:  142 MYDGPPLRQNPKKGAAVPGLKASGESGQSAAIIRLYGVSAQGHSVLMHVHGVLPYFYCACPDDFDEGRCGDVRAALDAAV--AQRDRNSGGNARV---VGVQVVRDRMSIYGYQFDRYTTLFKVFLSMPSYVPKLRSALEAGLTLPGCEFR--SYQTYESNVPFILRFMIDEDIKGCNWVE 315          
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: A0A2R5G2Q3_9STRA (DNA polymerase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2Q3_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.470e-38
Identity = 80/177 (45.20%), Postives = 111/177 (62.71%), Query Frame = 0
Query:    1 MYDGLPLASNPCEGKTVPGSPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPD-FNEANIAEFQAALDAQLRESRTGRASFGGHSIRQHVMAVVPVEKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRFGSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLEL 176
            MY G PL  +P  G+ VPG  +  VP+IR+YG T +GQSV+CHV+G TPYFY   P D F E+ ++ F+ ALDA++  +   R + G       V+AVV  EK ++ GY  G K  +LQI +++PNLV  A+++L  GF          + TYE+  PFVLR+M+DNDIVG NWL +
Sbjct:  115 MYSGDPLREHPVPGEHVPGLRSGEVPIIRVYGVTDKGQSVMCHVYGVTPYFYTDIPGDAFGESELSRFREALDARVCSA--ARINQGSA-----VVAVVIREKMSIMGYCGGAKKRYLQIMMSLPNLVPKAKSVLQNGFACPGFPEK-QFMTYESNVPFVLRYMVDNDIVGSNWLTI 283          
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: H3B666_LATCH (DNA polymerase n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3B666_LATCH)

HSP 1 Score: 149 bits (376), Expect = 2.010e-38
Identity = 75/161 (46.58%), Postives = 105/161 (65.22%), Query Frame = 0
Query:   17 VPGSPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEANIAEFQAALDAQ-LRESRTGRASFGGHSIRQHVMAVVPVEKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRFGSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLEL 176
            +PG+ + PVPVIR++G T EG SV CHVHGF PYFY        + +++EF+  L+   +R+ R+ +      SI Q V+AV   EK ++YGY   RK  FL+I +A+P L+  A+ +L  GFRFG  +   AYQ+YEA   F +RFM+DND+VGCNW+EL
Sbjct:  111 MPGATHGPVPVIRMFGITMEGNSVCCHVHGFAPYFYVPVQNGKKQEHLSEFKRELNTVVIRDMRSNK-----DSISQAVLAVDICEKESIYGYHGKRKIPFLKITMALPRLIAPAKRLLEQGFRFGPFSVQ-AYQSYEANIDFEIRFMVDNDVVGCNWIEL 265          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DAE2_CAFRO4.320e-4652.81DNA polymerase n=2 Tax=Cafeteria roenbergensis Tax... [more]
A0A482RF44_9ARCH3.670e-4347.46DNA_pol_B_exo1 domain-containing protein (Fragment... [more]
A0A401NGF2_SCYTO3.420e-4046.58Uncharacterized protein n=1 Tax=Scyliorhinus toraz... [more]
UPI0009A33C646.160e-4047.20DNA polymerase delta catalytic subunit n=1 Tax=Rhi... [more]
A0A0P1AFV1_PLAHL6.650e-4046.96DNA polymerase n=9 Tax=Peronosporaceae TaxID=4777 ... [more]
A0A401SLN7_CHIPU1.240e-3947.20DNA polymerase n=8 Tax=Galeoidea TaxID=119195 RepI... [more]
A0A421FHY3_9STRA7.920e-3943.46DNA polymerase n=3 Tax=Phytophthora kernoviae TaxI... [more]
H3GAM4_PHYRM7.970e-3944.20DNA polymerase n=3 Tax=Phytophthora TaxID=4783 Rep... [more]
A0A2R5G2Q3_9STRA1.470e-3845.20DNA polymerase n=1 Tax=Hondaea fermentalgiana TaxI... [more]
H3B666_LATCH2.010e-3846.58DNA polymerase n=2 Tax=Latimeria chalumnae TaxID=7... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.342.10coord: 19..176
e-value: 2.2E-34
score: 120.2
NoneNo IPR availablePANTHERPTHR10322DNA POLYMERASE CATALYTIC SUBUNITcoord: 24..176
NoneNo IPR availablePANTHERPTHR10322:SF23DNA POLYMERASE DELTA CATALYTIC SUBUNITcoord: 24..176
IPR006133DNA-directed DNA polymerase, family B, exonuclease domainPFAMPF03104DNA_pol_B_exo1coord: 34..175
e-value: 9.5E-21
score: 74.3
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 25..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82051contigM-pyrifera_M_contig82051:98..625 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82051.19195.1mRNA_M-pyrifera_M_contig82051.19195.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig82051 98..631 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig82051.19195.1 ID=prot_M-pyrifera_M_contig82051.19195.1|Name=mRNA_M-pyrifera_M_contig82051.19195.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp
MYDGLPLASNPCEGKTVPGSPNAPVPVIRLYGCTPEGQSVLCHVHGFTPY
FYCSAPPDFNEANIAEFQAALDAQLRESRTGRASFGGHSIRQHVMAVVPV
EKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRFGSQTRPLAYQ
TYEAKCPFVLRFMIDNDIVGCNWLEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006133DNA-dir_DNA_pol_B_exonuc
IPR012337RNaseH-like_sf