prot_M-pyrifera_M_contig8200.19187.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig8200.19187.1
Unique Name	prot_M-pyrifera_M_contig8200.19187.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	120

Homology

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BLAST of mRNA_M-pyrifera_M_contig8200.19187.1 vs. uniprot
Match: D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 1.180e-69
Identity = 114/116 (98.28%), Postives = 116/116 (100.00%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGDKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAKAPKKAGDKK++NKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116

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BLAST of mRNA_M-pyrifera_M_contig8200.19187.1 vs. uniprot
Match: A0A6U0X3U9_9STRA (Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A6U0X3U9_9STRA)

HSP 1 Score: 197 bits (500), Expect = 4.850e-63
Identity = 103/116 (88.79%), Postives = 112/116 (96.55%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGDKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAKAPKKAGDK K  KRTESYSSYIYKVLKQVHP+TGISK+GMSIMNSFIND+FER+AGE+G+L RY+KKATLSSRE+QT+VRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   15 MAKTPSKKSAKAPKKAGDKVKKGKRTESYSSYIYKVLKQVHPETGISKKGMSIMNSFINDIFERLAGEAGRLARYSKKATLSSREIQTSVRLMLPGELAKHAVSEGTKAVTKFTSS 130

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BLAST of mRNA_M-pyrifera_M_contig8200.19187.1 vs. uniprot
Match: A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)

HSP 1 Score: 193 bits (491), Expect = 7.500e-62
Identity = 105/117 (89.74%), Postives = 110/117 (94.02%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGD-KKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK+AKAPKKA D KKK  KRTESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117

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BLAST of mRNA_M-pyrifera_M_contig8200.19187.1 vs. uniprot
Match: A0A836CJT3_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT3_9STRA)

HSP 1 Score: 193 bits (491), Expect = 5.100e-60
Identity = 105/117 (89.74%), Postives = 110/117 (94.02%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGD-KKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK+AKAPKKA D KKK  KRTESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:  134 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 250

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BLAST of mRNA_M-pyrifera_M_contig8200.19187.1 vs. uniprot
Match: A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)

HSP 1 Score: 189 bits (479), Expect = 5.230e-60
Identity = 101/118 (85.59%), Postives = 111/118 (94.07%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGDKKKSNK--RTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAKAPKK G+K K+ K  R ESYS+YIYKVLKQVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKTGEKGKNRKVKRIESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 118

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BLAST of mRNA_M-pyrifera_M_contig8200.19187.1 vs. uniprot
Match: H2B_OLILU (Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=H2B_OLILU)

HSP 1 Score: 188 bits (478), Expect = 6.330e-60
Identity = 99/115 (86.09%), Postives = 109/115 (94.78%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGDKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTS 115
            MAKTPSKK+AKAPKKAG K+  NKR E+YSSYIYKVLKQVHPDTGISKRGMSIMNSFIND+FER+AGE+ +L RYNK++TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS
Sbjct:    1 MAKTPSKKAAKAPKKAGSKR--NKRVETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTS 113

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BLAST of mRNA_M-pyrifera_M_contig8200.19187.1 vs. uniprot
Match: B7FWR8_PHATC (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FWR8_PHATC)

HSP 1 Score: 188 bits (477), Expect = 9.590e-60
Identity = 100/116 (86.21%), Postives = 108/116 (93.10%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGDKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSK+SAKAPKKA    KS KRTE+YSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:    1 MAKTPSKQSAKAPKKAATGTKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 116

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BLAST of mRNA_M-pyrifera_M_contig8200.19187.1 vs. uniprot
Match: A0A6U6DWX5_9STRA (Histone H2B n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DWX5_9STRA)

HSP 1 Score: 184 bits (467), Expect = 3.760e-58
Identity = 100/115 (86.96%), Postives = 109/115 (94.78%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGDKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTS 115
            MAKTPSKK+A APKKAG K+ S KRTESYSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S
Sbjct:    8 MAKTPSKKAA-APKKAGGKR-SRKRTESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSS 120

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BLAST of mRNA_M-pyrifera_M_contig8200.19187.1 vs. uniprot
Match: B8BX20_THAPS (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B8BX20_THAPS)

HSP 1 Score: 180 bits (456), Expect = 1.730e-56
Identity = 101/119 (84.87%), Postives = 111/119 (93.28%), Query Frame = 0

Query:    1 MAKTPSKKS-AKAPKKA--GDKKK-SNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTS 115
            MAKTPSK++ AKA KKA  GDKKK S KR ESYS+YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+AGE+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S
Sbjct:    1 MAKTPSKQAPAKAAKKAATGDKKKRSKKRVESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSS 119

[Close]

BLAST of mRNA_M-pyrifera_M_contig8200.19187.1 vs. uniprot
Match: A0A7R9ZTA9_9STRA (Histone H2B n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZTA9_9STRA)

HSP 1 Score: 181 bits (459), Expect = 3.850e-56
Identity = 98/115 (85.22%), Postives = 106/115 (92.17%), Query Frame = 0

Query:    3 KTPSKKSAKAPKKAGD-KKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            KTPSK+SAKAPKKA     KS KRTE+YSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:   64 KTPSKQSAKAPKKASTGSSKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 178

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig8200.19187.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig8200.19187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWI8_ECTSI	1.180e-69	98.28	Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
A0A6U0X3U9_9STRA	4.850e-63	88.79	Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 R...	[more]
A0A836CJ22_9STRA	7.500e-62	89.74	Histone H2B n=2 Tax=Tribonema minus TaxID=303371 R...	[more]
A0A836CJT3_9STRA	5.100e-60	89.74	Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R...	[more]
A0A485K2U0_9STRA	5.230e-60	85.59	Histone H2B n=29 Tax=Stramenopiles TaxID=33634 Rep...	[more]
H2B_OLILU	6.330e-60	86.09	Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=830...	[more]
B7FWR8_PHATC	9.590e-60	86.21	Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re...	[more]
A0A6U6DWX5_9STRA	3.760e-58	86.96	Histone H2B n=4 Tax=Odontella aurita TaxID=265563 ...	[more]
B8BX20_THAPS	1.730e-56	84.87	Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re...	[more]
A0A7R9ZTA9_9STRA	3.850e-56	85.22	Histone H2B n=1 Tax=Craspedostauros australis TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 70..87 score: 56.83 coord: 29..47 score: 84.56 coord: 87..100 score: 90.61 coord: 48..68 score: 67.66 coord: 100..113 score: 92.65
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 19..115 e-value: 1.3E-69 score: 247.3
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 4..117
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 84..106
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 3..92 e-value: 2.8E-18 score: 66.5
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 1..117 e-value: 7.2E-57 score: 192.8
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 4..116
None	No IPR available	PANTHER	PTHR23428:SF196	HISTONE H2B TYPE 1-N	coord: 4..117

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig8200	contig	M-pyrifera_M_contig8200:10375..10734 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig8200.19187.1	mRNA_M-pyrifera_M_contig8200.19187.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig8200 10375..10761 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig8200.19187.1 ID=prot_M-pyrifera_M_contig8200.19187.1|Name=mRNA_M-pyrifera_M_contig8200.19187.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
MAKTPSKKSAKAPKKAGDKKKSNKRTESYSSYIYKVLKQVHPDTGISKRG
MSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAK
HAVSEGTKAVTKFTSSYSA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000558	Histone_H2B
IPR007125	Histone_H2A/H2B/H3
IPR009072	Histone-fold