prot_M-pyrifera_M_contig81931.19173.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81931.19173.1
Unique Nameprot_M-pyrifera_M_contig81931.19173.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length230
Homology
BLAST of mRNA_M-pyrifera_M_contig81931.19173.1 vs. uniprot
Match: A0A5A8EDA0_CAFRO (Senescence domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EDA0_CAFRO)

HSP 1 Score: 95.5 bits (236), Expect = 4.800e-19
Identity = 64/200 (32.00%), Postives = 104/200 (52.00%), Query Frame = 0
Query:   18 IVVVGRWVGEGLRMGAVLVGRGVGYLSGGLRGYLRGVGEGE----EVVVSEELRGNLARVRVLSGAAVTITQSMTVAVTEMARGLGRALVQTVGESEMGRKVGG-MVEGEKGKAVMKVALSSAAAFGEVWEAMDDAAKTIGTAMGEGVVEVVTHRYGEEAGEVAKDGVEVGARLGKSALNLKNVGTAGVVVRATAAEARR 212
            +V  G+W   GL +GA + G GV      +    R   E E    +  VS+    N+ R R+ S AAV +T+ + V +TE+ +G+GRA+   VGES+ G+  G  +      + + +V L+   A  ++W+A+++   T+G  +GE   E V  RYG  A    ++G+ V    G++ LNL+ V   G+ V A+   ARR
Sbjct:  309 VVGAGQWAATGLVLGARMAGSGVRRAGTAIASRSRNGREAEPEREDAEVSKSTLRNIRRARMASSAAVLVTRGLVVTMTELTKGMGRAVGALVGESDAGKAAGKRLAASTTAQGLKRVGLAGLVAVSDLWDALEEGLMTVGGDIGEATEEAVGARYGAAAASATREGMMVAGDAGQTLLNLRRVAPVGLAVNASKTAARR 508          
BLAST of mRNA_M-pyrifera_M_contig81931.19173.1 vs. uniprot
Match: A0A433U352_ELYCH (Senescence domain-containing protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433U352_ELYCH)

HSP 1 Score: 54.7 bits (130), Expect = 4.400e-5
Identity = 58/217 (26.73%), Postives = 99/217 (45.62%), Query Frame = 0
Query:    9 ESAEVLATGIVVVGRWVGEGLRMGAVLVGRGVGYLSGGLRGYLRGVGEGEEV-VVSEELRGNLARVRVLSGAAVTITQSMTVAVTEMARGLGRALVQTV---GESEMGRKVGGMVEGEKGKA----VMKVALSSAAAFGEVWEAMDDAAKTIGTAMGEGVVEVVTHRYGEEAGEVAKDGVEVGARLGKSALNLKNVGTAGVVVRATAAEARRKLTDM 217
            ++A  ++ GI+V   W+  G+  GA   G     L  G     RG    EE   V   ++  +   RV +  AV +T  +   + E    L + +   V   GE  +   +    E   GK+    V+KVA S    FG V+  ++ AAK +G ++ +  V+VVTH+YGE+AG + ++ +     +  +A N+ N+G   +  R      +  L D+
Sbjct:  359 DTASKISKGILVAADWITWGVGKGAEKAGE---LLKAGSEKLRRGSQPTEEPRKVDPRVQQGVKYARVATKGAVKVTGYIVNKLGEATVVLAKQMAPHVRRHGEKVIPNSL--KKENSSGKSTLDGVVKVAASGLQGFGTVFMGLEHAAKALGKSLTQETVQVVTHKYGEQAGMLTENTMYTAGNVAVAAYNVDNMGMKAIAKRTAKETGKAVLHDL 570          
BLAST of mRNA_M-pyrifera_M_contig81931.19173.1 vs. uniprot
Match: UPI0018D688D7 (spartin-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D688D7)

HSP 1 Score: 53.9 bits (128), Expect = 7.660e-5
Identity = 30/102 (29.41%), Postives = 53/102 (51.96%), Query Frame = 0
Query:  127 VMKVALSSAAAFGEVWEAMDDAAKTIGTAMGEGVVEVVTHRYGEEAGEVAKDGVEVGARLGKSALNLKNVGTAGVVVRATAAEARRKLTDMGEDRLVKHLSD 228
            V++VA SS   FG V+  ++ AAK++  ++    VEVV H+YG +A       ++    +G SA N+ ++G   +  RA     +  L D  ++ + K+  D
Sbjct:  422 VVEVAASSLRGFGTVYSGLETAAKSLAKSISNATVEVVQHKYGNDAARFTDTTLDAATNIGVSAYNMNHIGVKAIAKRAAKDTGKAVLEDYNKESVSKNGKD 523          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81931.19173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A5A8EDA0_CAFRO4.800e-1932.00Senescence domain-containing protein n=4 Tax=Cafet... [more]
A0A433U352_ELYCH4.400e-526.73Senescence domain-containing protein n=1 Tax=Elysi... [more]
UPI0018D688D77.660e-529.41spartin-like n=1 Tax=Patiria miniata TaxID=46514 R... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009686Senescence/spartin-associatedPFAMPF06911Senescencecoord: 9..197
e-value: 6.7E-25
score: 88.5
NoneNo IPR availablePANTHERPTHR21068FAMILY NOT NAMEDcoord: 10..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81931contigM-pyrifera_M_contig81931:224..913 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81931.19173.1mRNA_M-pyrifera_M_contig81931.19173.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81931 224..913 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81931.19173.1 ID=prot_M-pyrifera_M_contig81931.19173.1|Name=mRNA_M-pyrifera_M_contig81931.19173.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=230bp
SSSLPSGAESAEVLATGIVVVGRWVGEGLRMGAVLVGRGVGYLSGGLRGY
LRGVGEGEEVVVSEELRGNLARVRVLSGAAVTITQSMTVAVTEMARGLGR
ALVQTVGESEMGRKVGGMVEGEKGKAVMKVALSSAAAFGEVWEAMDDAAK
TIGTAMGEGVVEVVTHRYGEEAGEVAKDGVEVGARLGKSALNLKNVGTAG
VVVRATAAEARRKLTDMGEDRLVKHLSDKT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009686Senescence/spartin