prot_M-pyrifera_M_contig8193.19170.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8193.19170.1
Unique Nameprot_M-pyrifera_M_contig8193.19170.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length78
Homology
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BLAST of mRNA_M-pyrifera_M_contig8193.19170.1 vs. uniprot
Match: A0A6H5KMH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH3_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 7.140e-17
Identity = 42/62 (67.74%), Postives = 49/62 (79.03%), Query Frame = 0 
Query:    1 MATLDGDTITSDTVKDLFAGLSEKAKNSTTRVARLPSGQLSLEELKSLKERLDAKLQHLRST 62
            MA LD +TITSD VKDLFAGL EKAK S+TRVA LPS QL+  EL + K+RL  +L+HLRST
Sbjct:   16 MAALDDETITSDKVKDLFAGLGEKAKASSTRVAALPSSQLNCAELAACKQRLKDRLEHLRST 77
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8193.19170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KMH3_9PHAE7.140e-1767.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 42..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8193contigM-pyrifera_M_contig8193:6315..6548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8193.19170.1mRNA_M-pyrifera_M_contig8193.19170.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8193 6283..6617 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8193.19170.1 ID=prot_M-pyrifera_M_contig8193.19170.1|Name=mRNA_M-pyrifera_M_contig8193.19170.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp
MATLDGDTITSDTVKDLFAGLSEKAKNSTTRVARLPSGQLSLEELKSLKE
RLDAKLQHLRSTGVLFDMKGVGDLNQI*
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