prot_M-pyrifera_M_contig8192.19166.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8192.19166.1
Unique Nameprot_M-pyrifera_M_contig8192.19166.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length381
Homology
BLAST of mRNA_M-pyrifera_M_contig8192.19166.1 vs. uniprot
Match: D8LEX7_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX7_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 9.850e-105
Identity = 223/417 (53.48%), Postives = 249/417 (59.71%), Query Frame = 0
Query:    1 MDLCLLRNDPTGSLRYSQEEGLPKSTIERLPQTRYKKPTARVA--KGGK------GHKPKHGEAS-----GEVAAGDVEGGMGAGTAAGVPGPAGPRTAAVAGAVPGE----RDSTADMCAICLVEYETGDELRVIPGCQHHFHKDCIDPWLETKAVCAYCKAKVEARKSCCDRALSSLSARVGLHLVAPTTIRFSSSRRTYTNEDVQQAMGPALPPSYGHSEMDYVGSMVAPLPGEGDAEGXXXXXXXXXV------------------AGGGSV-GARGTV----QEEERQGSIVAQPASAPSFIVVPRDPSFGAEGGXXXXXXXXGSINAGGKGSARQERTTREMFGSRAGSGTME--------------EKEETGAGGVASVGDRRRG----MSGGRLRDVVFGGDTPEFREA 359
            MDLCLLRNDPTGSLRYSQEEGL K +IERLPQTRYK+P +  A  KG K      G KP   EA+     G V   D+ G  G+ TAA       P+TA VAGA  GE    RDST DMCAICLVEYETGDELR+IPGC H FHK+CIDPWLETKAVCAYCKA VEAR++CCDR   S+S R+G++LVAPTTIRFSSSRRTYTNEDVQ AMGP LP SYGHSEMDYVGS VAP     D E         X                   AG GS    RG +    Q  + QGSIV QPASAPS++VVPR+ S G +G         G   AG         +TRE+  S A + T E              EKEE     VA   + RRG     S GR   VVFGG+T EFREA
Sbjct:   84 MDLCLLRNDPTGSLRYSQEEGLTKRSIERLPQTRYKRPVSGTAQKKGDKKTPASDGKKPDDTEAAAAGEEGGVTGSDLHGPPGSSTAA-------PKTAVVAGAEGGEGEGARDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRVYRSVSDRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEGGEAEAXXXXXXXXXXXXXXFXXXXPAGSGSTRSTRGAIVLPDQGGQPQGSIVVQPASAPSYVVVPREYSLGGDGIDEEYPGNGGEGLAGS--------STRELASSAARASTTEGLPDDVAQATDATEEKEEI----VAEAAEERRGSHKGFSDGR-GGVVFGGNTEEFREA 480          
BLAST of mRNA_M-pyrifera_M_contig8192.19166.1 vs. uniprot
Match: A0A6H5KYP0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYP0_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 9.630e-99
Identity = 217/406 (53.45%), Postives = 242/406 (59.61%), Query Frame = 0
Query:    1 MDLCLLRNDPTGSLRYSQEEGLPKSTIERLPQTRYKKPTARVA--KGGK------GHKPKHGEASGEVAAGDVEGGMGAGTAAGVPGPAGPRTAAVAGAVPGER----DSTADMCAICLVEYETGDELRVIPGCQHHFHKDCIDPWLETKAVCAYCKAKVEARKSCCDRALSSLSARVGLHLVAPTTIRFSSSRRTYTNEDVQQAMGPALPPSYGHSEMDYVGSMVAPLPGEGDAE---GXXXXXXXXXVA--------GGGSVGARGTVQE------------EERQGSIVAQPASAPSFIVVPRDPSFGAEGGXXXXXXXXGSINAGGKG-------SARQERTTREMFGSRAGSGTMEEKEETGAGGVASVGDRRRG----MSGGRLRDVVFGGDTPEFREAE 360
            MDLCLLRNDPTGSLRYSQEEGL K +IERLP+TRYK+P +  A  KGGK      G KP   EA+     G V G    G  AG  G   P+TA V  A  GER    DST DMCAICLVEYETGDELR+IPGC H FHK+CIDPWLETKAVCAYCKA VEAR++CCDR   S+S R+G++LVAPTTIRFSSSRRTYTNEDVQ AMGP LP SYGHSEMDYVGS VAP     D E   G          A        GGG     G+ +             + ++GSIV QPASAPS++VVPR+ S G  GG        G     G         SAR   T R        +   EEKEE     VA   + RRG     S GR   VVFGG+T EFREAE
Sbjct:  277 MDLCLLRNDPTGSLRYSQEEGLTKRSIERLPETRYKRPVSGSAQKKGGKKTPAADGKKPDGTEAAAAGEEGGVTGSDLHGAPAGRTGA--PQTAVVLAAEGGEREGARDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRIYRSVSNRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEGVEAEATTPITADAAPGQAFGGGGPARSGSTRSTRGAIVLPDQGGQPQEGSIVVQPASAPSYVVVPREYSLG--GGIDNEHPGNGGEGPVGSSMRELTSSSARASATERPPDEVARATDATEEKEEI----VAEAPEERRGSQKGFSDGR-GGVVFGGNTEEFREAE 673          
BLAST of mRNA_M-pyrifera_M_contig8192.19166.1 vs. uniprot
Match: A0A835ZK41_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK41_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 3.870e-14
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 0
Query:   87 AVAGAVPGERDSTAD-MCAICLVEYETGDELRVIPGCQHHFHKDCIDPWLETKAVCAYCKAKV 148
            A  G V G R+   D MCAICL ++E GD+LRV+P C H +HK C+DPWLETKA+C  CK +V
Sbjct:  234 AAMGDVEGGREGVGDLMCAICLADFEGGDQLRVVPHCFHQYHKACLDPWLETKAICPLCKQRV 296          
BLAST of mRNA_M-pyrifera_M_contig8192.19166.1 vs. uniprot
Match: A0A836C7Z7_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Z7_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.770e-13
Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 0
Query:   95 ERDSTADMCAICLVEYETGDELRVIPGCQHHFHKDCIDPWLETKAVCAYCKAKVEARKSCCDRALSSLSA 164
            E       CAICL E+ETGD LRV+P C HH+HK C+DPWLE++ +C  CK  V       + +LSS+ A
Sbjct:  113 ENPQLGHRCAICLNEFETGDVLRVVPRCNHHYHKACLDPWLESRGICPLCKQLVHPLDRDREASLSSICA 182          
BLAST of mRNA_M-pyrifera_M_contig8192.19166.1 vs. uniprot
Match: A0A0B6XUB7_9EUPU (RING-type domain-containing protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6XUB7_9EUPU)

HSP 1 Score: 70.9 bits (172), Expect = 7.060e-12
Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 0
Query:  100 ADMCAICLVEYETGDELRVIPGCQHHFHKDCIDPWLETKAVCAYCKAKVEARKS 153
            A  C ICL +YETGDE RV+P C+H FHK C+D WL+T A C  C+++V  + S
Sbjct:   29 APQCNICLCDYETGDEKRVLP-CKHDFHKHCVDQWLKTNATCPICRSEVRMKDS 81          
BLAST of mRNA_M-pyrifera_M_contig8192.19166.1 vs. uniprot
Match: A0A8J5S5L1_ZIZPA (RING-type domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5S5L1_ZIZPA)

HSP 1 Score: 76.3 bits (186), Expect = 1.210e-11
Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 0
Query:  103 CAICLVEYETGDELRVIPGCQHHFHKDCIDPWLETKAVCAYCKAKVE 149
            CA+CL+E+E GD+LR++P C H FH +CIDPWLET+  C  C+A +E
Sbjct:  128 CAVCLMEFEDGDDLRLLPHCSHAFHPECIDPWLETRVTCPLCRANLE 174          
BLAST of mRNA_M-pyrifera_M_contig8192.19166.1 vs. uniprot
Match: A0A8I6WLA5_HORVV (RING-type domain-containing protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6WLA5_HORVV)

HSP 1 Score: 70.5 bits (171), Expect = 5.130e-11
Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 0
Query:  103 CAICLVEYETGDELRVIPGCQHHFHKDCIDPWLETKAVCAYCKAKVEARKS 153
            CA+CL EY  GDELRV+PGC H FH+ C+D WL  +  C  C+   ++R S
Sbjct:   91 CAVCLAEYADGDELRVLPGCAHAFHRRCVDQWLRRRPSCPLCRTSPQSRAS 141          
BLAST of mRNA_M-pyrifera_M_contig8192.19166.1 vs. uniprot
Match: A0A3B6KCS5_WHEAT (RING-type domain-containing protein n=1 Tax=Triticum aestivum TaxID=4565 RepID=A0A3B6KCS5_WHEAT)

HSP 1 Score: 70.5 bits (171), Expect = 6.150e-11
Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 0
Query:  103 CAICLVEYETGDELRVIPGCQHHFHKDCIDPWLETKAVCAYCKAKVEARKS 153
            CA+CL EY  GDELRV+PGC H FH+ C+D WL  +  C  C+   ++R S
Sbjct:   91 CAVCLAEYADGDELRVLPGCAHAFHRRCVDQWLRRRPSCPLCRTSPQSRAS 141          
BLAST of mRNA_M-pyrifera_M_contig8192.19166.1 vs. uniprot
Match: A0A3B6MIZ0_WHEAT (RING-type domain-containing protein n=2 Tax=Triticum aestivum TaxID=4565 RepID=A0A3B6MIZ0_WHEAT)

HSP 1 Score: 70.5 bits (171), Expect = 6.570e-11
Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 0
Query:  103 CAICLVEYETGDELRVIPGCQHHFHKDCIDPWLETKAVCAYCKAKVEAR 151
            CA+CL EY  GDELRV+PGC H FH+ C+D WL  +  C  C+A  ++R
Sbjct:   94 CAVCLAEYADGDELRVMPGCAHTFHRRCVDQWLRRRPSCPLCRASSQSR 142          
BLAST of mRNA_M-pyrifera_M_contig8192.19166.1 vs. uniprot
Match: A9SWN4_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SWN4_PHYPA)

HSP 1 Score: 67.4 bits (163), Expect = 8.050e-11
Identity = 31/52 (59.62%), Postives = 36/52 (69.23%), Query Frame = 0
Query:  103 CAICLVEYETGDELRVIPGCQHHFHKDCIDPWL-ETKAVCAYCKAKVEARKS 153
            C ICLVEYE GDE+RV+P CQH +HKDC+D WL E   VC  C+  V   KS
Sbjct:    2 CHICLVEYEDGDEIRVLP-CQHEYHKDCVDKWLKEVHRVCPLCRGDVCDLKS 52          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8192.19166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEX7_ECTSI9.850e-10553.48RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KYP0_9PHAE9.630e-9953.45RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835ZK41_9STRA3.870e-1457.14RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836C7Z7_9STRA1.770e-1348.57RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A0B6XUB7_9EUPU7.060e-1253.70RING-type domain-containing protein (Fragment) n=1... [more]
A0A8J5S5L1_ZIZPA1.210e-1157.45RING-type domain-containing protein n=1 Tax=Zizani... [more]
A0A8I6WLA5_HORVV5.130e-1150.98RING-type domain-containing protein n=1 Tax=Hordeu... [more]
A0A3B6KCS5_WHEAT6.150e-1150.98RING-type domain-containing protein n=1 Tax=Tritic... [more]
A0A3B6MIZ0_WHEAT6.570e-1153.06RING-type domain-containing protein n=2 Tax=Tritic... [more]
A9SWN4_PHYPA8.050e-1159.62Predicted protein (Fragment) n=1 Tax=Physcomitrium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 103..144
e-value: 1.2E-4
score: 31.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 101..145
e-value: 6.6E-12
score: 45.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 103..145
score: 10.468
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 89..153
e-value: 7.6E-18
score: 65.5
NoneNo IPR availablePANTHERPTHR45798FAMILY NOT NAMEDcoord: 17..150
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 101..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8192contigM-pyrifera_M_contig8192:8547..12027 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8192.19166.1mRNA_M-pyrifera_M_contig8192.19166.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8192 8547..12033 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8192.19166.1 ID=prot_M-pyrifera_M_contig8192.19166.1|Name=mRNA_M-pyrifera_M_contig8192.19166.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=381bp
MDLCLLRNDPTGSLRYSQEEGLPKSTIERLPQTRYKKPTARVAKGGKGHK
PKHGEASGEVAAGDVEGGMGAGTAAGVPGPAGPRTAAVAGAVPGERDSTA
DMCAICLVEYETGDELRVIPGCQHHFHKDCIDPWLETKAVCAYCKAKVEA
RKSCCDRALSSLSARVGLHLVAPTTIRFSSSRRTYTNEDVQQAMGPALPP
SYGHSEMDYVGSMVAPLPGEGDAEGGGGGGAGSAVAGGGSVGARGTVQEE
ERQGSIVAQPASAPSFIVVPRDPSFGAEGGGGGGGGGSGSINAGGKGSAR
QERTTREMFGSRAGSGTMEEKEETGAGGVASVGDRRRGMSGGRLRDVVFG
GDTPEFREAEAEARAREGTGAGTGEVSDRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD