prot_M-pyrifera_M_contig81711.19131.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81711.19131.1
Unique Nameprot_M-pyrifera_M_contig81711.19131.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length304
Homology
BLAST of mRNA_M-pyrifera_M_contig81711.19131.1 vs. uniprot
Match: A0A6I3MRB7_9FLAO (Tetratricopeptide repeat protein n=1 Tax=Flavobacterium sp. MC2016-06 TaxID=2676308 RepID=A0A6I3MRB7_9FLAO)

HSP 1 Score: 81.3 bits (199), Expect = 1.910e-13
Identity = 85/307 (27.69%), Postives = 141/307 (45.93%), Query Frame = 0
Query:    6 DSAAILAEVILVKSKEAGYTLGQAKGEFATGHVAYLKGKREYAVPHFLKALDIYR-PLKGNDPLIDQANICITLGKIYRQNHMLDM-------AIEFYEQGIEYALECNNEEALRKLLYNQSVAYRRNGDIDKALDAVTQSMNFILEGDTAIKQR----TYNQFGVIYYDLEEYDQAREWYNKMIQLDSAKPSPKYYRAQAYHNIAISYQLQSNFAMAWVYYKLALKEKELLGNTEKLFITLRDMAELALLENRKDTALNYAHKALVLIEQVPKTPENYNLYLTLSECVQES--NPVKALFYAKQYI 298
            DS    AE  +  S++ GY  G A G    G+ + + G    A+ +F KA   ++  LK N    +Q  I   L + Y  + ++         +++ YEQ ++   E N++ ++ K+L N  + Y+      KAL  +  +    L    AIK++    T    GVIY++L EY  A ++Y K  +   AK + K   A   + +   Y  Q N  +A  YY+ +L   E + N       L ++A L   E +   AL YA+K+L   +++    + +N    LSE + ES  NP  AL + K Y+
Sbjct:   60 DSTLFYAEKAIAASQKKGYNFGLATGYLNEGNASIILGNYPEALKYFKKAQTEFKIALKDNS---NQKQIKNGLARSYASSGVVHSEQSDYTSSLQNYEQALKLYQETNDKLSISKILNNIGILYKSQRIYPKALYYLKGAYKIQL----AIKEQNAPITLTNIGVIYFELGEYQNAIDYYEK-AKKGFAKNNNKRGFALLNNYLGEYYTKQKNPDLALKYYQQSLDLYEGIQNKFGASYALYNIALLLQEEQKYKEALFYANKSLAYAQEIGVLDQTFNTEKLLSE-LHESLHNPEAALAHYKNYV 357          
BLAST of mRNA_M-pyrifera_M_contig81711.19131.1 vs. uniprot
Match: A0A0J7IUP2_9FLAO (Uncharacterized protein n=1 Tax=Chryseobacterium sp. FH2 TaxID=1674291 RepID=A0A0J7IUP2_9FLAO)

HSP 1 Score: 64.3 bits (155), Expect = 7.580e-8
Identity = 53/218 (24.31%), Postives = 100/218 (45.87%), Query Frame = 0
Query:   83 RQNHMLDMAIEFYEQGIEYALECNNEEALRKLLYNQSVAYRRNGDIDKALDAVTQSMNFILEGDTAIKQR----TYNQFGVIYYDLEEYDQAREWYNKMIQLDSAKPSPKYYRAQAYHNIAISYQLQSNFAMAWVYYKLALKEKELLGNTEKLFITLRDMAELALLENRKDTALNYAHKALVLIEQVPKTPENYNLYLTLSECVQESNPVKALFYAKQ 296
            R  ++ D A  +Y    +  ++ N+     + L N ++   + GD   +++   ++  F+     +I  R    +YN  G+ YY +  YD+A + Y   I+  S     KY     Y+N+A+S   +++   A  Y K A+  K+ +         L ++A+   +E++    LN  +KAL + +    T    + Y TLSE  +  +  KA FYA++
Sbjct:   40 RNKNITDSAFYYYTLAKDEYIKNNDSLRAGQCLVNMAIIETKKGDFYGSIETSIEANKFLSNIKDSIVSRDLAASYNNMGIAYYYMYNYDEAIKCYKDAIRY-SINNKTKY---TYYNNLAVSLLKENDSRQALEYLKHAILIKDSIEYAR----ALNNLAKAKFMEDKSYNPLNEFYKALEIRQNNKDTEGLNSSYSTLSEYFKNKDKSKAFFYARK 249          
BLAST of mRNA_M-pyrifera_M_contig81711.19131.1 vs. uniprot
Match: A0A6L4ZDE2_9BACT (ATP-binding domain-containing n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=A0A6L4ZDE2_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 2.680e-6
Identity = 48/211 (22.75%), Postives = 91/211 (43.13%), Query Frame = 0
Query:   88 LDMAIEFYEQGIEYALECNNEEALRKLLYNQSVAYRRNGDIDKALDAVTQSMNFILEGD-TAIKQRTYNQFGVIYYDLEEYDQAREWYNKMIQLDSAKPSPKYYRAQAYHNIAISYQLQSNFAMAWVYYKLALKEKELLGNTEKLFITLRDMAELALLENRKDTALNYAHKAL---VLIEQVPKTPENYNLYLTLSECVQESNPVKALFYA 294
            LD ++++ +Q +  A + N  +     L N    YR +G++ KA+D   ++M          I    Y  FGVIY+DL++Y +A  +Y + ++    K +       +Y N+  +Y   +    +  + +LA          E+L +  R    + +  N    AL+Y  K +     ++       NYN   +L + + E  P   ++YA
Sbjct:   57 LDSSLKYSQQALALARKINFIKGEASALINIGFGYRESGELPKAIDFALKAMTIAQNHQFREIMGTCYTLFGVIYFDLQDYKKAINYYQQALKCYKKKSNI----ISSYSNLGSAYIKNNQLDSSKYFIQLAYNNSIEANYLERLSVIFRVYGLIEIQSNNNQLALDYFKKGVQEAFKLKNYRDVASNYNDIASLFQKMNE--PDSCIYYA 261          
BLAST of mRNA_M-pyrifera_M_contig81711.19131.1 vs. uniprot
Match: A0A7Y6YIG1_9BACT (Response regulator n=1 Tax=Flavobacteriia bacterium TaxID=2044941 RepID=A0A7Y6YIG1_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 3.900e-5
Identity = 53/210 (25.24%), Postives = 96/210 (45.71%), Query Frame = 0
Query:   91 AIEFYEQGIEYALECNNEEALRKLLYNQSVAYRRNGDIDKALDAVTQSMNFILE-GDTAIKQRTYNQFGVIYYDLEEYDQAREWYNKMIQLDSAKPSPKYYRAQAYHNIAISYQLQSNFAMAWVYYKLALKEKELLGNTEKLFITLRDMAELALLENRKDTALNYAHKAL-----VLIEQVPKTPENYNLY-LTLSECVQESNPVKALFY 293
            AIE   + +E+A   NNE+A+  +  +    YR NG  + A++    +     E  +T          G I++D+E Y+ A E+Y K I ++S +   +   A AY+N+ +  + + N + A  YY  AL  ++  G  E +  + +    L       D++L Y  +AL     ++ +++      +NLY LT     +     KA+ Y
Sbjct:   67 AIEVAAELLEFAELKNNEKAVADMYNHIGNIYRGNGLDENAIENHLIATEIFGELNETGSYVYGLINIGNIFFDIEYYEDAEEYYKKAISVESDEFDLRAAHAVAYNNLGLVEEERGNKSTAKSYYVTALSLRKDFGEEELIIHSYQQFGALHSYFEEYDSSLTYYLEALNRTHHLIDDEIIVMERFWNLYQLTAESYFELGEYPKAMAY 276          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81711.19131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6I3MRB7_9FLAO1.910e-1327.69Tetratricopeptide repeat protein n=1 Tax=Flavobact... [more]
A0A0J7IUP2_9FLAO7.580e-824.31Uncharacterized protein n=1 Tax=Chryseobacterium s... [more]
A0A6L4ZDE2_9BACT2.680e-622.75ATP-binding domain-containing n=1 Tax=Prolixibacte... [more]
A0A7Y6YIG1_9BACT3.900e-525.24Response regulator n=1 Tax=Flavobacteriia bacteriu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 232..265
e-value: 57.0
score: 8.3
coord: 72..105
e-value: 0.047
score: 22.8
coord: 29..62
e-value: 63.0
score: 7.9
coord: 151..184
e-value: 1.7
score: 17.6
coord: 192..225
e-value: 12.0
score: 14.3
coord: 112..145
e-value: 180.0
score: 3.9
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 72..102
e-value: 0.005
score: 17.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 72..105
score: 6.52
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 151..184
score: 10.561
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 112..145
score: 5.723
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 192..225
score: 5.723
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 29..62
score: 5.517
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..147
e-value: 2.3E-16
score: 61.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 148..304
e-value: 1.6E-19
score: 72.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 32..222
NoneNo IPR availablePFAMPF13424TPR_12coord: 152..219
e-value: 5.1E-10
score: 39.5
NoneNo IPR availablePANTHERPTHR10098RAPSYN-RELATEDcoord: 20..275
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 72..225
score: 14.515

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81711contigM-pyrifera_M_contig81711:12..923 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81711.19131.1mRNA_M-pyrifera_M_contig81711.19131.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81711 12..923 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81711.19131.1 ID=prot_M-pyrifera_M_contig81711.19131.1|Name=mRNA_M-pyrifera_M_contig81711.19131.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=304bp
YSTNLDSAAILAEVILVKSKEAGYTLGQAKGEFATGHVAYLKGKREYAVP
HFLKALDIYRPLKGNDPLIDQANICITLGKIYRQNHMLDMAIEFYEQGIE
YALECNNEEALRKLLYNQSVAYRRNGDIDKALDAVTQSMNFILEGDTAIK
QRTYNQFGVIYYDLEEYDQAREWYNKMIQLDSAKPSPKYYRAQAYHNIAI
SYQLQSNFAMAWVYYKLALKEKELLGNTEKLFITLRDMAELALLENRKDT
ALNYAHKALVLIEQVPKTPENYNLYLTLSECVQESNPVKALFYAKQYISE
TKAF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom